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Carg12541 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12541
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncyclin-dependent protein kinase inhibitor SMR4
Genome locationCarg_Chr14:554470..554697
RNA-Seq ExpressionCarg12541
SyntenyCarg12541
Gene Ontology termsGO:0006974 - cellular response to DNA damage stimulus (biological process)
GO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580535.1 Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. sororia]2.3e-36100Show/hide
Query:  MEAKQGPANYEEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREACV
        MEAKQGPANYEEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREACV
Subjt:  MEAKQGPANYEEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREACV

XP_022983341.1 cyclin-dependent protein kinase inhibitor SMR4 [Cucurbita maxima]3.4e-3597.33Show/hide
Query:  MEAKQGPANYEEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREACV
        MEAKQGPANYEEECSTPTRWECRIPAV NCPPPPPPKKKKAV SGKKREPPKHGYFQPPDLEALFSVPPRREACV
Subjt:  MEAKQGPANYEEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREACV

XP_023528630.1 cyclin-dependent protein kinase inhibitor SMR4 [Cucurbita pepo subsp. pepo]1.2e-3598.67Show/hide
Query:  MEAKQGPANYEEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREACV
        MEAKQGPANYEEECSTPTRWECRIPAV NCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREACV
Subjt:  MEAKQGPANYEEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREACV

XP_031737830.1 cyclin-dependent protein kinase inhibitor SMR4 [Cucumis sativus]8.9e-2882.43Show/hide
Query:  MEAKQGPANYEEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREAC
        M++KQG  NYEEECSTPTRWECRIPAV NCPPPP   KKK  ++GKKREPPKHGYFQPPDLEALFS+PPRREAC
Subjt:  MEAKQGPANYEEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREAC

XP_038905412.1 cyclin-dependent protein kinase inhibitor SMR4 [Benincasa hispida]2.8e-2987.84Show/hide
Query:  MEAKQGPANYEEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREAC
        MEAKQGPANYEEECSTPTRWECRIPAV NCPPPP   KKK  + GKKR+PPKHGYFQPPDLEALFSVPPRREAC
Subjt:  MEAKQGPANYEEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREAC

TrEMBL top hitse value%identityAlignment
A0A0A0LAJ2 Uncharacterized protein4.3e-2882.43Show/hide
Query:  MEAKQGPANYEEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREAC
        M++KQG  NYEEECSTPTRWECRIPAV NCPPPP   KKK  ++GKKREPPKHGYFQPPDLEALFS+PPRREAC
Subjt:  MEAKQGPANYEEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREAC

A0A1R3GVE4 Uncharacterized protein3.5e-1464.62Show/hide
Query:  EEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREACV
        ++  STPTR ECRIPA   CPPPPP  KKK  S GK++EPPK+GYFQPPDL+ LF++  RR+ACV
Subjt:  EEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREACV

A0A1R3J8M1 Uncharacterized protein7.1e-1567.69Show/hide
Query:  EEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREACV
        ++  STPTR ECRIPA   CPPPPP  KKK  S GK+REPPK+GYFQPPDLE LF++  RR+ACV
Subjt:  EEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREACV

A0A5C7IXT6 Uncharacterized protein2.1e-1468.66Show/hide
Query:  EEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPD-LEALFSV--PPRREAC
        +E CSTPTR ECRIP V+ C PPPP KKKKA S GKKREPPK+GYFQ PD LEA F++  P R +AC
Subjt:  EEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPD-LEALFSV--PPRREAC

A0A6J1J1Y0 cyclin-dependent protein kinase inhibitor SMR41.6e-3597.33Show/hide
Query:  MEAKQGPANYEEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREACV
        MEAKQGPANYEEECSTPTRWECRIPAV NCPPPPPPKKKKAV SGKKREPPKHGYFQPPDLEALFSVPPRREACV
Subjt:  MEAKQGPANYEEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREACV

SwissProt top hitse value%identityAlignment
Q1JPP8 Cyclin-dependent protein kinase inhibitor SMR42.4e-1256.25Show/hide
Query:  EEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREAC
        EE C+TP     RIP  S CPPPP    +K +   +KR+PP++GYFQPPDLE LF   PRREAC
Subjt:  EEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREAC

Q9LNX4 Cyclin-dependent protein kinase inhibitor SMR53.2e-1255.38Show/hide
Query:  NYEEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREA
        +Y+  C+TPTR +CRIPA   C PPP  +K+  +  GKKREPPK GYFQPPDL+  FSV    +A
Subjt:  NYEEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREA

Arabidopsis top hitse value%identityAlignment
AT5G02220.1 unknown protein1.7e-1356.25Show/hide
Query:  EEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREAC
        EE C+TP     RIP  S CPPPP    +K +   +KR+PP++GYFQPPDLE LF   PRREAC
Subjt:  EEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREAC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCGAAACAGGGGCCTGCAAATTACGAGGAAGAGTGTTCGACGCCGACCCGATGGGAGTGTCGGATTCCAGCGGTGTCCAACTGTCCGCCGCCGCCGCCGCCGAA
GAAGAAGAAGGCTGTAAGTAGTGGGAAGAAGCGGGAGCCTCCGAAACATGGCTATTTTCAGCCCCCTGATCTTGAGGCTCTGTTTTCTGTTCCTCCAAGAAGGGAAGCTT
GTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCGAAACAGGGGCCTGCAAATTACGAGGAAGAGTGTTCGACGCCGACCCGATGGGAGTGTCGGATTCCAGCGGTGTCCAACTGTCCGCCGCCGCCGCCGCCGAA
GAAGAAGAAGGCTGTAAGTAGTGGGAAGAAGCGGGAGCCTCCGAAACATGGCTATTTTCAGCCCCCTGATCTTGAGGCTCTGTTTTCTGTTCCTCCAAGAAGGGAAGCTT
GTGTTTAG
Protein sequenceShow/hide protein sequence
MEAKQGPANYEEECSTPTRWECRIPAVSNCPPPPPPKKKKAVSSGKKREPPKHGYFQPPDLEALFSVPPRREACV