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Carg12582 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12582
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein MODIFIER OF SNC1 11-like
Genome locationCarg_Chr14:729031..730200
RNA-Seq ExpressionCarg12582
SyntenyCarg12582
Gene Ontology termsGO:0016973 - poly(A)+ mRNA export from nucleus (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040746 - THO1_MOS11, C-terminal domain
IPR044209 - Protein MODIFIER OF SNC1 11


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580577.1 WRKY transcription factor 44, partial [Cucurbita argyrosperma subsp. sororia]3.6e-82100Show/hide
Query:  MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA
        MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
        EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
Subjt:  EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
KAG7017329.1 Protein MODIFIER OF SNC1 11 [Cucurbita argyrosperma subsp. argyrosperma]3.6e-82100Show/hide
Query:  MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA
        MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
        EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
Subjt:  EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
XP_022934788.1 protein MODIFIER OF SNC1 11-like [Cucurbita moschata]1.0e-8199.38Show/hide
Query:  MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA
        MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
        EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLS+ATDEEAKKKARLVRFSPFL
Subjt:  EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
XP_022983965.1 protein MODIFIER OF SNC1 11-like [Cucurbita maxima]6.7e-8198.15Show/hide
Query:  MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA
        MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRR+FAVGPSHSVTPTATKEGTES+RA LGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
        EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
Subjt:  EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
XP_023527279.1 protein MODIFIER OF SNC1 11-like [Cucurbita pepo subsp. pepo]3.0e-8198.77Show/hide
Query:  MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA
        MATDF+EELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRA LGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
        EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
Subjt:  EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
TrEMBL top hitse value%identityAlignment
A0A0A0LDV0 Tho1_MOS11_C domain-containing protein7.8e-5978.4Show/hide
Query:  MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA
        MATDFT+ELS+N LPGPK  LPL  G AAAGNG VDQHQNRRS             TKEG ESQ + +GR  E HASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
        EKRFSRAERFGIDSVCGPDEM KAEELKRKARAERFELLTLS+ATDEEAKKKARL RF+P L
Subjt:  EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
A0A1S3B640 protein MODIFIER OF SNC1 11-like isoform X14.1e-6079.01Show/hide
Query:  MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA
        MATDF EELSEN LPGPK  LPL+ G  AAGNG VDQHQNR S           +ATKEG ESQ + +GR  E HASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
        EKRFSRAERFGIDSVCGPDEM KAEELKRKARAERFELLTLSMATDEEAKKKARL RF+P+L
Subjt:  EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
A0A5D3DNB7 Protein MODIFIER OF SNC1 11-like isoform X14.1e-6079.01Show/hide
Query:  MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA
        MATDF EELSEN LPGPK  LPL+ G  AAGNG VDQHQNR S           +ATKEG ESQ + +GR  E HASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
        EKRFSRAERFGIDSVCGPDEM KAEELKRKARAERFELLTLSMATDEEAKKKARL RF+P+L
Subjt:  EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
A0A6J1F8Q7 protein MODIFIER OF SNC1 11-like5.0e-8299.38Show/hide
Query:  MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA
        MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
        EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLS+ATDEEAKKKARLVRFSPFL
Subjt:  EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
A0A6J1J7D8 protein MODIFIER OF SNC1 11-like3.3e-8198.15Show/hide
Query:  MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA
        MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRR+FAVGPSHSVTPTATKEGTES+RA LGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
        EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
Subjt:  EKRFSRAERFGIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL
SwissProt top hitse value%identityAlignment
Q9LZ08 Protein MODIFIER OF SNC1 112.1e-1655.05Show/hide
Query:  KEGTESQ--RAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMFKAEELKRKARAERFELLTLSMATD---EEA
        KE T+S    +  G  S   + V DI KKIRRAERFG+ V+L+E EKR SRAERFG  +   V G +   KAEELKRKARA+RF + + +  TD   EEA
Subjt:  KEGTESQ--RAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMFKAEELKRKARAERFELLTLSMATD---EEA

Query:  KKKARLVRF
        KKKARL RF
Subjt:  KKKARLVRF
Arabidopsis top hitse value%identityAlignment
AT5G02770.1 unknown protein1.5e-1755.05Show/hide
Query:  KEGTESQ--RAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMFKAEELKRKARAERFELLTLSMATD---EEA
        KE T+S    +  G  S   + V DI KKIRRAERFG+ V+L+E EKR SRAERFG  +   V G +   KAEELKRKARA+RF + + +  TD   EEA
Subjt:  KEGTESQ--RAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMFKAEELKRKARAERFELLTLSMATD---EEA

Query:  KKKARLVRF
        KKKARL RF
Subjt:  KKKARLVRF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGATTTCACAGAAGAACTGAGCGAAAACAATCTTCCAGGACCGAAATCGGCCTTGCCGTTGAATTTAGGATCTGCAGCCGCTGGTAATGGCCAAGTAGATCA
ACACCAAAATCGCCGTTCATTTGCTGTCGGGCCTTCCCATTCCGTGACTCCCACCGCTACAAAGGAAGGCACTGAATCTCAACGTGCCGTTTTGGGGAGAACATCGGAGC
ATCATGCTTCTGTTTTTGATATCTTCAAGAAGATCCGTCGTGCGGAGCGGTTCGGGATTCCTGTACGTTTGTCGGAGGCAGAAAAGCGATTCTCTCGAGCTGAGAGGTTC
GGCATTGATTCAGTATGTGGACCGGATGAAATGTTCAAAGCAGAAGAGCTGAAGAGAAAGGCCAGAGCGGAGAGATTTGAGCTCTTAACTTTGTCAATGGCTACTGACGA
GGAGGCAAAGAAGAAAGCGCGGCTTGTCAGATTTTCCCCATTTTTGTAG
mRNA sequenceShow/hide mRNA sequence
CTAAATTTCGCGCAGGTCCCGATCTTCCTTCTTCAATGGCGACTGATTTCACAGAAGAACTGAGCGAAAACAATCTTCCAGGACCGAAATCGGCCTTGCCGTTGAATTTA
GGATCTGCAGCCGCTGGTAATGGCCAAGTAGATCAACACCAAAATCGCCGTTCATTTGCTGTCGGGCCTTCCCATTCCGTGACTCCCACCGCTACAAAGGAAGGCACTGA
ATCTCAACGTGCCGTTTTGGGGAGAACATCGGAGCATCATGCTTCTGTTTTTGATATCTTCAAGAAGATCCGTCGTGCGGAGCGGTTCGGGATTCCTGTACGTTTGTCGG
AGGCAGAAAAGCGATTCTCTCGAGCTGAGAGGTTCGGCATTGATTCAGTATGTGGACCGGATGAAATGTTCAAAGCAGAAGAGCTGAAGAGAAAGGCCAGAGCGGAGAGA
TTTGAGCTCTTAACTTTGTCAATGGCTACTGACGAGGAGGCAAAGAAGAAAGCGCGGCTTGTCAGATTTTCCCCATTTTTGTAGAGTTCCCTTTTGGTTGAACAAGAAAG
CTATATCAACAAGTCTTATGCACAGCCAAGCTCATTTAACCAATTGGACAAGCCGAGCTATTAACCATTTAGTTCATCGTATCCTGAACCCTTTCAATTTAAGGATGCGG
CCATTACTTTGTATGAAATGTATAACATTGAACTCCATTAGATGTAGGTGTTTTAAATTTCTAGAACTGCACCCTCTTCATCAAATTGGAGGGTACACTTCCATCC
Protein sequenceShow/hide protein sequence
MATDFTEELSENNLPGPKSALPLNLGSAAAGNGQVDQHQNRRSFAVGPSHSVTPTATKEGTESQRAVLGRTSEHHASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERF
GIDSVCGPDEMFKAEELKRKARAERFELLTLSMATDEEAKKKARLVRFSPFL