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Carg12629 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12629
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: cultured cell;
Genome locationCarg_Chr07:6967854..6973993
RNA-Seq ExpressionCarg12629
SyntenyCarg12629
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027511.1 hypothetical protein SDJN02_11525, partial [Cucurbita argyrosperma subsp. argyrosperma]7.9e-97100Show/hide
Query:  MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNW
        MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNW
Subjt:  MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNW

Query:  QVLEYWAGGACCKSLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNIIAPDSRFTAGIV
        QVLEYWAGGACCKSLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNIIAPDSRFTAGIV
Subjt:  QVLEYWAGGACCKSLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNIIAPDSRFTAGIV

XP_022922529.1 uncharacterized protein LOC111430498 [Cucurbita moschata]4.4e-7179.78Show/hide
Query:  MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNW
        M+R GEGAAA   AAA AASSSQ +R GRRVDPLLVTCRFFS+VT LTAILCIVSNVI+AIRSFKN SDIFDGIFRCYAVVI+FFVV+AETEWEFILKNW
Subjt:  MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNW

Query:  QVLEYWAGGACCK---SLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI
        +VLEYWAG    +   ++MTRAFP YSVE+RE ILLQ+AASYLLLACGAVYVV+GI+CIGFLKRAREEKET+KDR+V DLQ +
Subjt:  QVLEYWAGGACCK---SLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI

XP_022984240.1 uncharacterized protein LOC111482612 [Cucurbita maxima]1.3e-7079.78Show/hide
Query:  MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNW
        M+R GEGAAA   AAA AASSSQ  R GRRVDPLLVTCRFFS+VT LTAILCIVSNVI+AIRSFKN SDIFDGIFRCYAVVI+FFVV+AETEWEFILKNW
Subjt:  MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNW

Query:  QVLEYWAGGACCK---SLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI
        +VLEYWAG    +   ++MTRAFP YSVE+RE ILLQ+AASYLLLACGAVYVV+GI+CIGFLKRAREEKET+KDR+V DLQ +
Subjt:  QVLEYWAGGACCK---SLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI

XP_023552582.1 uncharacterized protein LOC111810200 isoform X2 [Cucurbita pepo subsp. pepo]1.7e-7078.69Show/hide
Query:  MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNW
        M+R GEGAA    AAA AASSSQ +R GRRVDPLLVTCRFFS+VT LTAILCIVSNV++AIRSFKN SDIFDGIFRCYAVVI+FFVV+AETEWEFILKNW
Subjt:  MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNW

Query:  QVLEYWAGGACCK---SLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI
        +VLEYWAG    +   ++MTRAFP YSVE+RE ILLQ+AASYLLLACGAVYVV+GI+CIGFLKRAREEKET+KDR+V DLQ +
Subjt:  QVLEYWAGGACCK---SLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI

XP_038905258.1 uncharacterized protein LOC120091338 isoform X1 [Benincasa hispida]1.2e-6878.69Show/hide
Query:  MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNW
        M+R+GEG     A AAAA+SSSQ  R  RRVDPLLVTCRFFS++T LTAILCIVSNVISAIRSFKN SD+FDGIFRCYAVVI+ FVV+AETEWEFILKNW
Subjt:  MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNW

Query:  QVLEYWAGGACCK---SLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI
        +VLEYWAG    +   ++MTRAFPVYSVE+RELILLQDAASYLLLACGAVYVV+GI+CIGFLKRAREEKETAKDR+V DLQ +
Subjt:  QVLEYWAGGACCK---SLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI

TrEMBL top hitse value%identityAlignment
A0A0A0KYH6 Uncharacterized protein1.4e-6776.63Show/hide
Query:  MDREGEGA-AAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKN
        M+R GEGA A A AA+++++SSSQ  R  R VDPLLVTCRFFS++T LTAILCIVSNVISAIRSFKN SDIFDGIFRCYAVVI+FF V+AETEWEFI KN
Subjt:  MDREGEGA-AAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKN

Query:  WQVLEYWAGGACCK---SLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI
        W+VLEYWAG    +   ++MTRAFPVYSVE+RELILLQDAASYLLLACGAVYVV+GI+CIGFLKRARE+KETAKD++V DLQ +
Subjt:  WQVLEYWAGGACCK---SLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI

A0A1S3BY74 uncharacterized protein LOC1034948611.1e-6776.5Show/hide
Query:  MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNW
        M+R GEG A AA+++++++SSSQ  R  R VDPLLVTCRFFS++T LTAILCIVSNVISAIRSFKN SDIFDGIFRCYAVVI+FFVV+AETEWEFI KNW
Subjt:  MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNW

Query:  QVLEYWAGGACCK---SLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI
        +VLEYWAG    +   ++MTRAFPVYSVE+RELILLQDAASYLLLACGAVYVV+GI+CIGFLKRARE+KETAKD++V DLQ +
Subjt:  QVLEYWAGGACCK---SLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI

A0A6J1D697 uncharacterized protein LOC1110177042.4e-5966.84Show/hide
Query:  MDREGE----GAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFI
        M ++GE    G     AA+++++SSS   R GRRVDPLLVTCRFFS++T LTAILCIV NVISA+RSFK+ +DIFDGIFRCYAV+I+ FVV+AETEWEFI
Subjt:  MDREGE----GAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFI

Query:  LKNWQVLEYWAGGACCK---SLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI
        +K W+VLEYWAG    +   ++MTRAFP YS ++RELI+LQD ASYLLL CGAVYV +GI+C+GFLKRAREEKETAK+R V DLQ +
Subjt:  LKNWQVLEYWAGGACCK---SLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI

A0A6J1E3M8 uncharacterized protein LOC1114304982.1e-7179.78Show/hide
Query:  MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNW
        M+R GEGAAA   AAA AASSSQ +R GRRVDPLLVTCRFFS+VT LTAILCIVSNVI+AIRSFKN SDIFDGIFRCYAVVI+FFVV+AETEWEFILKNW
Subjt:  MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNW

Query:  QVLEYWAGGACCK---SLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI
        +VLEYWAG    +   ++MTRAFP YSVE+RE ILLQ+AASYLLLACGAVYVV+GI+CIGFLKRAREEKET+KDR+V DLQ +
Subjt:  QVLEYWAGGACCK---SLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI

A0A6J1J849 uncharacterized protein LOC1114826126.2e-7179.78Show/hide
Query:  MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNW
        M+R GEGAAA   AAA AASSSQ  R GRRVDPLLVTCRFFS+VT LTAILCIVSNVI+AIRSFKN SDIFDGIFRCYAVVI+FFVV+AETEWEFILKNW
Subjt:  MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNW

Query:  QVLEYWAGGACCK---SLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI
        +VLEYWAG    +   ++MTRAFP YSVE+RE ILLQ+AASYLLLACGAVYVV+GI+CIGFLKRAREEKET+KDR+V DLQ +
Subjt:  QVLEYWAGGACCK---SLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G33625.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Golgi apparatus membrane protein TVP15 (InterPro:IPR013714); Has 59 Blast hits to 59 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).1.2e-5057.74Show/hide
Query:  AAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNWQVLEYWAGGACCK--
        A  +S S   + G R DP LV CR FS+VT+L AILC+V NV++A+RSF+++ D+FDGIFRCYAVVI+ FVV+ ETEW FILK  +VLEYWAG    +  
Subjt:  AAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNWQVLEYWAGGACCK--

Query:  -SLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI
         ++MTRAFP Y  +K++L+LLQ+ ASYLLLACG +YV++G++CIGFLKRAR++KE ++++ V DL+ I
Subjt:  -SLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNI

AT4G33625.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Golgi apparatus membrane protein TVP15 (InterPro:IPR013714); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).3.5e-5057.83Show/hide
Query:  AAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNWQVLEYWAGGACCK--
        A  +S S   + G R DP LV CR FS+VT+L AILC+V NV++A+RSF+++ D+FDGIFRCYAVVI+ FVV+ ETEW FILK  +VLEYWAG    +  
Subjt:  AAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNWQVLEYWAGGACCK--

Query:  -SLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQ
         ++MTRAFP Y  +K++L+LLQ+ ASYLLLACG +YV++G++CIGFLKRAR++KE ++++ V DL+
Subjt:  -SLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGAGAAGGAGAGGGAGCGGCGGCAGCGGCAGCGGCAGCGGCAGCGGCTGCGTCGTCTTCTCAGGCCAACAGATCTGGTAGGAGGGTGGATCCGTTGCTCGTAAC
TTGCAGGTTTTTCAGTATTGTAACAACTCTCACTGCTATTCTCTGCATTGTTTCCAATGTCATCTCTGCGATTCGATCCTTTAAGAACAACTCCGATATATTCGATGGTA
TATTTCGTTGTTATGCAGTTGTGATCTCATTCTTCGTGGTTATTGCTGAGACGGAATGGGAGTTTATTCTTAAGAACTGGCAGGTATTGGAATACTGGGCTGGCGGGGCA
TGTTGCAAATCTTTAATGACAAGAGCTTTCCCTGTGTATTCTGTAGAGAAGAGAGAGCTTATTCTTCTCCAAGATGCTGCAAGTTATCTCCTCCTTGCTTGTGGTGCAGT
CTATGTTGTAACGGGAATAATGTGCATTGGGTTTCTCAAACGTGCTCGTGAAGAGAAAGAGACCGCAAAGGACAGGATTGTCAATGATCTTCAGAACATAATTGCACCAG
ATTCTCGCTTCACTGCTGGGATTGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAGAGAAGGAGAGGGAGCGGCGGCAGCGGCAGCGGCAGCGGCAGCGGCTGCGTCGTCTTCTCAGGCCAACAGATCTGGTAGGAGGGTGGATCCGTTGCTCGTAAC
TTGCAGGTTTTTCAGTATTGTAACAACTCTCACTGCTATTCTCTGCATTGTTTCCAATGTCATCTCTGCGATTCGATCCTTTAAGAACAACTCCGATATATTCGATGGTA
TATTTCGTTGTTATGCAGTTGTGATCTCATTCTTCGTGGTTATTGCTGAGACGGAATGGGAGTTTATTCTTAAGAACTGGCAGGTATTGGAATACTGGGCTGGCGGGGCA
TGTTGCAAATCTTTAATGACAAGAGCTTTCCCTGTGTATTCTGTAGAGAAGAGAGAGCTTATTCTTCTCCAAGATGCTGCAAGTTATCTCCTCCTTGCTTGTGGTGCAGT
CTATGTTGTAACGGGAATAATGTGCATTGGGTTTCTCAAACGTGCTCGTGAAGAGAAAGAGACCGCAAAGGACAGGATTGTCAATGATCTTCAGAACATAATTGCACCAG
ATTCTCGCTTCACTGCTGGGATTGTATGA
Protein sequenceShow/hide protein sequence
MDREGEGAAAAAAAAAAAASSSQANRSGRRVDPLLVTCRFFSIVTTLTAILCIVSNVISAIRSFKNNSDIFDGIFRCYAVVISFFVVIAETEWEFILKNWQVLEYWAGGA
CCKSLMTRAFPVYSVEKRELILLQDAASYLLLACGAVYVVTGIMCIGFLKRAREEKETAKDRIVNDLQNIIAPDSRFTAGIV