; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg12648 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12648
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionhigh mobility group B protein 6-like
Genome locationCarg_Chr07:7101016..7101784
RNA-Seq ExpressionCarg12648
SyntenyCarg12648
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595551.1 hypothetical protein SDJN03_12104, partial [Cucurbita argyrosperma subsp. sororia]1.0e-9198.94Show/hide
Query:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
        MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
Subjt:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML

Query:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVI
        RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEF +
Subjt:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVI

KAG7027530.1 hypothetical protein SDJN02_11544, partial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-94100Show/hide
Query:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
        MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
Subjt:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML

Query:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVIGI
        RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVIGI
Subjt:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVIGI

XP_022924949.1 high mobility group B protein 6-like [Cucurbita moschata]3.4e-9298.95Show/hide
Query:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
        MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
Subjt:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML

Query:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVIGI
        RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRIS  RSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVIGI
Subjt:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVIGI

XP_022966463.1 high mobility group B protein 6-like [Cucurbita maxima]4.6e-8995.81Show/hide
Query:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
        MQSLLHPTHLDLHLKSGRRPLQ +NSLSNHVPAVAKIVKSK E+VEIPLSGDANKEN PPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
Subjt:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML

Query:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVIGI
        RERDMVLEM+RKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISP RSLREKEREKIFTDLQFQEFE SDEEESIDENSSSDSSEFVIGI
Subjt:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVIGI

XP_023517579.1 high mobility group B protein 6-like [Cucurbita pepo subsp. pepo]6.5e-9197.91Show/hide
Query:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
        MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKEN PPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
Subjt:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML

Query:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVIGI
        RERDMVLEM+RKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISP RSLREKEREKIFTDLQFQEFEISDEEESIDE SSSDSSEFVIGI
Subjt:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVIGI

TrEMBL top hitse value%identityAlignment
A0A1S3CJ78 high mobility group B protein 63.5e-6677.6Show/hide
Query:  MQSLLH--PTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEK
        MQ+L H  P+  D+ LKSGRRPLQP+NSL N VP+VAKI+KSK E ++I LSGDANKEN PP  AT    ESCDLSLADELNAVK K+ERLRLDGERTEK
Subjt:  MQSLLH--PTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEK

Query:  MLRERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVIG
        MLRERD+VLE+R KE+LQRS+ QRDLEMEVDRLFRLKELRSYCMRISP RSLREKEREKIFTD QF EFEI D EES+ ENSS DSSEFV G
Subjt:  MLRERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVIG

A0A5A7SJQ2 High mobility group B protein 62.7e-6677.6Show/hide
Query:  MQSLLH--PTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEK
        MQ+L H  P+  D+ LKSGRRPLQP+NSL N VP+VAKI+KSK E ++I LSGDANKEN PP  AT    ESCDLSLADELNAVK K+ERLRLDGERTEK
Subjt:  MQSLLH--PTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEK

Query:  MLRERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVIG
        MLRERD+VLE+R KE+LQRS+ QRDLEMEVDRLFRLKELRSYCMRISP RSLREKEREKIFTD QF EFEI D EES+ ENSS DSSEFV G
Subjt:  MLRERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVIG

A0A5D3CEI7 High mobility group B protein 63.5e-6677.6Show/hide
Query:  MQSLLH--PTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEK
        MQ+L H  P+  D+ LKSGRRPLQP+NSL N VP+VAKI+KSK E ++I LSGDANKEN PP  AT    ESCDLSLADELNAVK K+ERLRLDGERTEK
Subjt:  MQSLLH--PTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEK

Query:  MLRERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVIG
        MLRERD+VLE+R KE+LQRS+ QRDLEMEVDRLFRLKELRSYCMRISP RSLREKEREKIFTD QF EFEI D EES+ ENSS DSSEFV G
Subjt:  MLRERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVIG

A0A6J1EAP1 high mobility group B protein 6-like1.7e-9298.95Show/hide
Query:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
        MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
Subjt:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML

Query:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVIGI
        RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRIS  RSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVIGI
Subjt:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVIGI

A0A6J1HS84 high mobility group B protein 6-like2.2e-8995.81Show/hide
Query:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
        MQSLLHPTHLDLHLKSGRRPLQ +NSLSNHVPAVAKIVKSK E+VEIPLSGDANKEN PPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML
Subjt:  MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKML

Query:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVIGI
        RERDMVLEM+RKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISP RSLREKEREKIFTDLQFQEFE SDEEESIDENSSSDSSEFVIGI
Subjt:  RERDMVLEMRRKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVIGI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G01910.1 unknown protein4.4e-2143.5Show/hide
Query:  SGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKMLRERDMVLEMRRKEIL
        SGR+ LQPRN        + +  K  A  V+ P + +  KEN+           S D SLA+EL+A K KLERLR D E TEK+L+ERD  +++    +L
Subjt:  SGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKMLRERDMVLEMRRKEIL

Query:  QRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEES-------IDENSSSDSS
        QR E Q+ LE++VDRLFRLKEL +Y  +ISP RSLR KE+++      F   E  DEE S       I+E SS+ S+
Subjt:  QRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEES-------IDENSSSDSS

AT5G01910.2 unknown protein2.2e-2046.48Show/hide
Query:  SGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKMLRERDMVLEMRRKEIL
        SGR+ LQPRN        + +  K  A  V+ P + +  KEN+           S D SLA+EL+A K KLERLR D E TEK+L+ERD  +++    +L
Subjt:  SGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKMLRERDMVLEMRRKEIL

Query:  QRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREK
        QR E Q+ LE++VDRLFRLKEL +Y  +ISP RSLR KE+++
Subjt:  QRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCTCTTCTCCATCCCACGCATCTAGATCTTCATCTCAAGTCCGGCCGCCGCCCACTCCAACCGAGGAATTCGCTCTCAAATCATGTTCCTGCAGTCGCCAAAAT
CGTCAAATCCAAGGCGGAACGGGTAGAGATCCCGCTATCCGGAGATGCCAATAAGGAAAACGTACCGCCGATTCACGCGACGGCGACGAGGACAGAGTCATGTGATTTGT
CTCTGGCGGATGAACTCAATGCGGTTAAGATGAAGCTTGAGAGATTGAGATTAGACGGTGAACGGACGGAGAAAATGTTGAGAGAGAGGGATATGGTGTTGGAGATGCGG
AGGAAGGAGATTTTGCAGAGAAGTGAGGTGCAGAGGGATCTGGAGATGGAGGTCGACAGGTTATTCAGATTGAAGGAACTCAGATCGTACTGTATGAGAATTTCTCCGAA
GCGAAGCCTCAGAGAGAAGGAGCGAGAGAAGATATTCACCGACTTACAATTTCAGGAGTTTGAAATCAGCGACGAAGAAGAATCGATTGACGAGAATTCATCGTCGGATT
CCTCAGAATTCGTCATAGGAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCTCTTCTCCATCCCACGCATCTAGATCTTCATCTCAAGTCCGGCCGCCGCCCACTCCAACCGAGGAATTCGCTCTCAAATCATGTTCCTGCAGTCGCCAAAAT
CGTCAAATCCAAGGCGGAACGGGTAGAGATCCCGCTATCCGGAGATGCCAATAAGGAAAACGTACCGCCGATTCACGCGACGGCGACGAGGACAGAGTCATGTGATTTGT
CTCTGGCGGATGAACTCAATGCGGTTAAGATGAAGCTTGAGAGATTGAGATTAGACGGTGAACGGACGGAGAAAATGTTGAGAGAGAGGGATATGGTGTTGGAGATGCGG
AGGAAGGAGATTTTGCAGAGAAGTGAGGTGCAGAGGGATCTGGAGATGGAGGTCGACAGGTTATTCAGATTGAAGGAACTCAGATCGTACTGTATGAGAATTTCTCCGAA
GCGAAGCCTCAGAGAGAAGGAGCGAGAGAAGATATTCACCGACTTACAATTTCAGGAGTTTGAAATCAGCGACGAAGAAGAATCGATTGACGAGAATTCATCGTCGGATT
CCTCAGAATTCGTCATAGGAATTTGA
Protein sequenceShow/hide protein sequence
MQSLLHPTHLDLHLKSGRRPLQPRNSLSNHVPAVAKIVKSKAERVEIPLSGDANKENVPPIHATATRTESCDLSLADELNAVKMKLERLRLDGERTEKMLRERDMVLEMR
RKEILQRSEVQRDLEMEVDRLFRLKELRSYCMRISPKRSLREKEREKIFTDLQFQEFEISDEEESIDENSSSDSSEFVIGI