; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg12677 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12677
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionlate embryogenesis abundant protein 46
Genome locationCarg_Chr07:7309796..7310909
RNA-Seq ExpressionCarg12677
SyntenyCarg12677
Gene Ontology termsGO:0006970 - response to osmotic stress (biological process)
GO:0009409 - response to cold (biological process)
GO:0009414 - response to water deprivation (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
InterPro domainsIPR005513 - Late embryogenesis abundant protein, LEA_1 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595576.1 18 kDa seed maturation protein, partial [Cucurbita argyrosperma subsp. sororia]6.5e-82100Show/hide
Query:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATHGMHPTTHGTATYST
        MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATHGMHPTTHGTATYST
Subjt:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATHGMHPTTHGTATYST

Query:  TGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGGGYS
        TGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGGGYS
Subjt:  TGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGGGYS

KGN54793.1 hypothetical protein Csa_011934 [Cucumis sativus]2.0e-6282.76Show/hide
Query:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATT--ATATHGMHPTTHGTATY
        MQSGK A+ESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKK+AKIHEAEL+KQEAR+HNAA++QA T  A ATHG HPTTH TATY
Subjt:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATT--ATATHGMHPTTHGTATY

Query:  STTGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGGGYS
        STTGA GYTTGTQQ SA+PGHGTGQPTG VTEGVVG HPIG +TGTGRTTTAHNP  GGG G  T   TGG Y+
Subjt:  STTGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGGGYS

XP_004146409.2 18 kDa seed maturation protein [Cucumis sativus]2.8e-6177.42Show/hide
Query:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATT--------------ATATH
        MQSGK A+ESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKK+AKIHEAEL+KQEAR+HNAA++QA T              +TATH
Subjt:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATT--------------ATATH

Query:  GMHPTTHGTATYSTTGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGGGYS
        G HPTTH TATYSTTGA GYTTGTQQ SA+PGHGTGQPTG VTEGVVG HPIG +TGTGRTTTAHNP  GGG G  T   TGG Y+
Subjt:  GMHPTTHGTATYSTTGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGGGYS

XP_022924969.1 late embryogenesis abundant protein 46 [Cucurbita moschata]4.6e-8099.42Show/hide
Query:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATHGMHPTTHGTATYST
        MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATHGMHPTTHGTATYST
Subjt:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATHGMHPTTHGTATYST

Query:  TGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGGGYS
        TGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNV GGGGDATRYSTGGGYS
Subjt:  TGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGGGYS

XP_022966467.1 late embryogenesis abundant protein 46 [Cucurbita maxima]7.4e-7897.09Show/hide
Query:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATHGMHPTTHGTATYST
        MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAR+HNAAMKQATTATATHGMHPTTHGTATYST
Subjt:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATHGMHPTTHGTATYST

Query:  TGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGGGYS
        TGAQGYTTGTQQMSAVPGHGTGQPT +VTEGVVGTHPIGHQTGTGRTTTAHNPNV  GGGDATRYSTGGGYS
Subjt:  TGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGGGYS

TrEMBL top hitse value%identityAlignment
A0A0A0KZ59 Uncharacterized protein9.5e-6382.76Show/hide
Query:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATT--ATATHGMHPTTHGTATY
        MQSGK A+ESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKK+AKIHEAEL+KQEAR+HNAA++QA T  A ATHG HPTTH TATY
Subjt:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATT--ATATHGMHPTTHGTATY

Query:  STTGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGGGYS
        STTGA GYTTGTQQ SA+PGHGTGQPTG VTEGVVG HPIG +TGTGRTTTAHNP  GGG G  T   TGG Y+
Subjt:  STTGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGGGYS

A0A1S3B5R4 18 kDa seed maturation protein4.4e-6081.87Show/hide
Query:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATT--ATATHGMHPTTHGTATY
        MQSGK AMES+KESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKK+AKIHEAEL+KQEAR+HNAA++QA T  A  THG HPTTH TAT+
Subjt:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATT--ATATHGMHPTTHGTATY

Query:  STTGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGG
        STTGA GYTTGT QMSA+PGHGTGQPTG VTEGVVG HPIG  TGTGRTTTAHNP  GG  G  T   TGG
Subjt:  STTGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGG

A0A5D3C2B4 18 kDa seed maturation protein4.4e-6081.87Show/hide
Query:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATT--ATATHGMHPTTHGTATY
        MQSGK AMES+KESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKK+AKIHEAEL+KQEAR+HNAA++QA T  A  THG HPTTH TAT+
Subjt:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATT--ATATHGMHPTTHGTATY

Query:  STTGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGG
        STTGA GYTTGT QMSA+PGHGTGQPTG VTEGVVG HPIG  TGTGRTTTAHNP  GG  G  T   TGG
Subjt:  STTGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGG

A0A6J1EAR4 late embryogenesis abundant protein 462.2e-8099.42Show/hide
Query:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATHGMHPTTHGTATYST
        MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATHGMHPTTHGTATYST
Subjt:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATHGMHPTTHGTATYST

Query:  TGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGGGYS
        TGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNV GGGGDATRYSTGGGYS
Subjt:  TGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGGGYS

A0A6J1HN24 late embryogenesis abundant protein 463.6e-7897.09Show/hide
Query:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATHGMHPTTHGTATYST
        MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAR+HNAAMKQATTATATHGMHPTTHGTATYST
Subjt:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATHGMHPTTHGTATYST

Query:  TGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGGGYS
        TGAQGYTTGTQQMSAVPGHGTGQPT +VTEGVVGTHPIGHQTGTGRTTTAHNPNV  GGGDATRYSTGGGYS
Subjt:  TGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGGGYS

SwissProt top hitse value%identityAlignment
P09441 Late embryogenesis abundant protein D-1134.2e-0737.28Show/hide
Query:  MESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATH----GMHPTTHGTATYSTTGA
        M+SMK++    AASAKAGM+K KA++QEK++++  RDP  KE+A E+K+ +  +AEL KQEAR HN        ATA H    G+  T + TA Y+    
Subjt:  MESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATH----GMHPTTHGTATYSTTGA

Query:  QGY-TTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHN--PNVGGGGGDATRYSTGG
         GY  TG       P  G+G  TG+  +  + +   G  T     TT +   PN         R + GG
Subjt:  QGY-TTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHN--PNVGGGGGDATRYSTGG

P46515 11 kDa late embryogenesis abundant protein1.1e-2060.91Show/hide
Query:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATHGMHPTTHGTATYST
        MQSGKNA  S KE+AANVAASAKAGM+KTKA++QEK EK+TA DP+ KE+A EKK+ + HEAE  KQ A+EHNAA KQ TT   T        GT +Y+T
Subjt:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATHGMHPTTHGTATYST

Query:  TGAQGYTTGT
        T   G+ TGT
Subjt:  TGAQGYTTGT

Q00747 Protein LE255.8e-0945.1Show/hide
Query:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATHGMHPTTHGTATYST
        MQ+GK+A           A++AKAGM+KTKA VQEK E++T RDPL KE+A EKK+ ++  AE+ K++A+  +AA KQ    T T        GT  Y  
Subjt:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATHGMHPTTHGTATYST

Query:  TG
        TG
Subjt:  TG

Q01417 18 kDa seed maturation protein3.7e-4061.27Show/hide
Query:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATA--THGMHP--TTHGTA
        MQ GK A ES+KE+A N+ ASAKAGM+KTKATVQEK E++TARDP+ KE+A +KK+AK+++AEL KQ AR+HN A KQ+ T      HG H   T  GTA
Subjt:  MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATA--THGMHP--TTHGTA

Query:  TYSTTGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGG
        TYSTTG  G   G  Q SA+PGHGTGQPTG VTEGVVG+HPIG   G G T TAHN   GG   D   Y TGG
Subjt:  TYSTTGAQGYTTGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGG

Q9FG31 Late embryogenesis abundant protein 462.0e-3860.61Show/hide
Query:  MESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATHGMHPTTHGTATYSTTGAQGYT
        M+SMKE+A+N+AASAK+GMDKTKAT++EK EK+  RDP+ K++A + K+ KI++AE+ K+E R+HNAAMK+A  A    G+     GTAT+STTG  G+ 
Subjt:  MESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATHGMHPTTHGTATYSTTGAQGYT

Query:  TGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGGGYS
        TGT QMSA+PGHGTGQ T +V EG   T PIG  TGTGR TTAHN +VGGGG  AT Y TGGGY+
Subjt:  TGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGGGYS

Arabidopsis top hitse value%identityAlignment
AT5G06760.1 Late Embryogenesis Abundant 4-51.5e-3960.61Show/hide
Query:  MESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATHGMHPTTHGTATYSTTGAQGYT
        M+SMKE+A+N+AASAK+GMDKTKAT++EK EK+  RDP+ K++A + K+ KI++AE+ K+E R+HNAAMK+A  A    G+     GTAT+STTG  G+ 
Subjt:  MESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATHGMHPTTHGTATYSTTGAQGYT

Query:  TGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGGGYS
        TGT QMSA+PGHGTGQ T +V EG   T PIG  TGTGR TTAHN +VGGGG  AT Y TGGGY+
Subjt:  TGTQQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGGGYS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATCAGGAAAGAACGCAATGGAATCCATGAAGGAATCGGCTGCCAATGTCGCAGCCTCGGCGAAGGCTGGCATGGATAAGACCAAAGCCACCGTTCAAGAGAAGAT
GGAGAAGGTGACGGCGCGTGACCCTTTAGCCAAAGAGATCGCAGAAGAGAAGAAACAGGCGAAAATTCATGAGGCGGAGCTCCACAAACAGGAGGCGCGTGAACACAACG
CCGCCATGAAACAGGCTACAACTGCGACGGCCACTCACGGGATGCACCCGACAACTCATGGGACAGCGACGTACTCAACCACCGGAGCTCAGGGCTACACCACCGGGACC
CAGCAGATGTCAGCCGTGCCTGGACACGGAACTGGGCAACCGACCGGCCAAGTAACGGAGGGTGTGGTGGGGACACATCCGATCGGACACCAGACTGGCACTGGGAGAAC
AACGACAGCCCACAACCCCAATGTCGGCGGCGGCGGCGGCGATGCAACTCGTTACAGCACCGGCGGCGGGTATAGTTAA
mRNA sequenceShow/hide mRNA sequence
CAAAGAAGAACTTCAAAAATGCAATCAGGAAAGAACGCAATGGAATCCATGAAGGAATCGGCTGCCAATGTCGCAGCCTCGGCGAAGGCTGGCATGGATAAGACCAAAGC
CACCGTTCAAGAGAAGATGGAGAAGGTGACGGCGCGTGACCCTTTAGCCAAAGAGATCGCAGAAGAGAAGAAACAGGCGAAAATTCATGAGGCGGAGCTCCACAAACAGG
AGGCGCGTGAACACAACGCCGCCATGAAACAGGCTACAACTGCGACGGCCACTCACGGGATGCACCCGACAACTCATGGGACAGCGACGTACTCAACCACCGGAGCTCAG
GGCTACACCACCGGGACCCAGCAGATGTCAGCCGTGCCTGGACACGGAACTGGGCAACCGACCGGCCAAGTAACGGAGGGTGTGGTGGGGACACATCCGATCGGACACCA
GACTGGCACTGGGAGAACAACGACAGCCCACAACCCCAATGTCGGCGGCGGCGGCGGCGATGCAACTCGTTACAGCACCGGCGGCGGGTATAGTTAAGATGGGAAGTTTG
TTGGGTTTGGTACAATAATAAGTGGGCTTCGTGTTGTTTTAAGGTTGAAGTCCAACGAGTTTGTGTTTGGTTTTAGGGTTTTTATGTTATGTATTGTTGTTTATGGTTTG
GATTGTTTTGTTTTGTTTTGTTTTGTT
Protein sequenceShow/hide protein sequence
MQSGKNAMESMKESAANVAASAKAGMDKTKATVQEKMEKVTARDPLAKEIAEEKKQAKIHEAELHKQEAREHNAAMKQATTATATHGMHPTTHGTATYSTTGAQGYTTGT
QQMSAVPGHGTGQPTGQVTEGVVGTHPIGHQTGTGRTTTAHNPNVGGGGGDATRYSTGGGYS