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Carg12679 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12679
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr07:7321375..7326969
RNA-Seq ExpressionCarg12679
SyntenyCarg12679
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647791.1 hypothetical protein Csa_004224 [Cucumis sativus]2.2e-5375.16Show/hide
Query:  GDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGVSTLLLSIVIIM
        G S ++QQGKG +NL   SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFN+VMPVVQRSVKGPMWLHFLIG            
Subjt:  GDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGVSTLLLSIVIIM

Query:  NCSKIYFQAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSS
                APPVI+FSSACAGM GGAVPALAQL +SSYHS  S S+DDKT DSRSSS
Subjt:  NCSKIYFQAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSS

KAG7027560.1 hypothetical protein SDJN02_11574 [Cucurbita argyrosperma subsp. argyrosperma]5.5e-89100Show/hide
Query:  MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI
        MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI
Subjt:  MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI

Query:  GVSTLLLSIVIIMNCSKIYFQAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
        GVSTLLLSIVIIMNCSKIYFQAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
Subjt:  GVSTLLLSIVIIMNCSKIYFQAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM

XP_022149788.1 uncharacterized protein LOC111018136 isoform X1 [Momordica charantia]9.1e-5275.84Show/hide
Query:  GDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGVSTLLLSIVIIM
        GDSES+ Q KGD NLI  SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMP+V+RSVKGPMWLHFLIG            
Subjt:  GDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGVSTLLLSIVIIM

Query:  NCSKIYFQAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDK
                APPVIVFSSACAGMAGG VPALAQLFS+SYHSA+  S   K
Subjt:  NCSKIYFQAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDK

XP_022925022.1 uncharacterized protein LOC111432392 [Cucurbita moschata]7.7e-7588.37Show/hide
Query:  MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI
        MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI
Subjt:  MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI

Query:  GVSTLLLSIVIIMNCSKIYFQAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
        G                    APPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
Subjt:  GVSTLLLSIVIIMNCSKIYFQAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM

XP_022966472.1 uncharacterized protein LOC111466117 [Cucurbita maxima]1.4e-7386.63Show/hide
Query:  MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI
        MNHQDPKLVAMFLGDSES+QQGKGDSNLI+KSN+RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI
Subjt:  MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI

Query:  GVSTLLLSIVIIMNCSKIYFQAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
        G                    APPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
Subjt:  GVSTLLLSIVIIMNCSKIYFQAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM

TrEMBL top hitse value%identityAlignment
A0A0A0L0B0 Uncharacterized protein5.2e-5373.12Show/hide
Query:  LGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGVSTLLLSIVII
        LG S ++QQGKG +NL   SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMI SAVGG ASAFYGFN+VMPVVQRSVKGPMWLHFLIG           
Subjt:  LGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGVSTLLLSIVII

Query:  MNCSKIYFQAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
                 APPVI+FSSACAGM GGAVPALAQL SSSYHS  S S+DDK  DSRSSS++
Subjt:  MNCSKIYFQAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM

A0A1S4E0V5 uncharacterized protein LOC1034959683.2e-5078.72Show/hide
Query:  SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGVSTLLLSIVIIMNCSKIYFQAPPVIVFSSA
        SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFN VMPVVQRSVKGPMWLHFLIG                    APPVIVFSSA
Subjt:  SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGVSTLLLSIVIIMNCSKIYFQAPPVIVFSSA

Query:  CAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
        CAGM GGAVPALAQL +SSYHS  S SKDDK+ DSRSSST+
Subjt:  CAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM

A0A6J1D7Q1 uncharacterized protein LOC111018136 isoform X14.4e-5275.84Show/hide
Query:  GDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGVSTLLLSIVIIM
        GDSES+ Q KGD NLI  SNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMP+V+RSVKGPMWLHFLIG            
Subjt:  GDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGVSTLLLSIVIIM

Query:  NCSKIYFQAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDK
                APPVIVFSSACAGMAGG VPALAQLFS+SYHSA+  S   K
Subjt:  NCSKIYFQAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDK

A0A6J1EAN3 uncharacterized protein LOC1114323923.7e-7588.37Show/hide
Query:  MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI
        MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI
Subjt:  MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI

Query:  GVSTLLLSIVIIMNCSKIYFQAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
        G                    APPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
Subjt:  GVSTLLLSIVIIMNCSKIYFQAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM

A0A6J1HN28 uncharacterized protein LOC1114661177.0e-7486.63Show/hide
Query:  MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI
        MNHQDPKLVAMFLGDSES+QQGKGDSNLI+KSN+RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI
Subjt:  MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLI

Query:  GVSTLLLSIVIIMNCSKIYFQAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
        G                    APPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM
Subjt:  GVSTLLLSIVIIMNCSKIYFQAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G41945.1 unknown protein4.9e-1132.26Show/hide
Query:  RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGVSTLLLSIVIIMNCSKIYFQAPPVIVFSSACAG
        RC  C   L+ + E   WTI P++ D+ ++ GS +GG  SA + FN  +P +Q    G   L FL+GV                    P ++V+S   A 
Subjt:  RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGVSTLLLSIVIIMNCSKIYFQAPPVIVFSSACAG

Query:  MAGGAVPALAQLFSSSYHSAMSPS
          G A+P  AQL  +SY+++ S S
Subjt:  MAGGAVPALAQLFSSSYHSAMSPS

AT2G41945.2 unknown protein4.9e-1132.26Show/hide
Query:  RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGVSTLLLSIVIIMNCSKIYFQAPPVIVFSSACAG
        RC  C   L+ + E   WTI P++ D+ ++ GS +GG  SA + FN  +P +Q    G   L FL+GV                    P ++V+S   A 
Subjt:  RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGVSTLLLSIVIIMNCSKIYFQAPPVIVFSSACAG

Query:  MAGGAVPALAQLFSSSYHSAMSPS
          G A+P  AQL  +SY+++ S S
Subjt:  MAGGAVPALAQLFSSSYHSAMSPS

AT2G41945.3 unknown protein2.3e-0830.28Show/hide
Query:  RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGVSTLLL------------------SIVIIMNCS
        RC  C   L+ + E   WTI P++ D+ ++ GS +GG  SA + FN  +P +Q    G   L FL+GV  LL+                   IV +   S
Subjt:  RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGVSTLLL------------------SIVIIMNCS

Query:  KIYFQAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPS
        +   Q        S    + G A+P  AQL  +SY+++ S S
Subjt:  KIYFQAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPS

AT3G04040.1 unknown protein4.2e-3959.57Show/hide
Query:  RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGVSTLLLSIVIIMNCSKIYFQAPPVIVFSSACAG
        RC HCAGPL+K++ET+ WT+ P IRDSFSMIGSAVGGTASAF GF+HVMP+V++ +KGPMWLHFL+G                    APPVIV SSACAG
Subjt:  RCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGVSTLLLSIVIIMNCSKIYFQAPPVIVFSSACAG

Query:  MAGGAVPALAQLFSSSYHSAMSPSKDDKTHDS---RSSSTM
        +AGGAVPALAQL SSSYH+A+  S+  +  D     +SST+
Subjt:  MAGGAVPALAQLFSSSYHSAMSPSKDDKTHDS---RSSSTM

AT5G18250.1 unknown protein2.7e-3859.15Show/hide
Query:  MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGVSTLLLSIVIIMNCSKIYFQAPPVIVFSSACA
        +RC HCAGPL++++ETS WT+ P IRDSFSMIGSAVGGTASAF GFNH MP+V++ +KGPMWLHFL+G                    APPVIV SSACA
Subjt:  MRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGVSTLLLSIVIIMNCSKIYFQAPPVIVFSSACA

Query:  GMAGGAVPALAQLFSSSY----HSAMSP--SKDDKTHDSRSS
        G+AGG VPALAQL SSSY    HS+  P   KD+K   S +S
Subjt:  GMAGGAVPALAQLFSSSY----HSAMSP--SKDDKTHDSRSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCACCAAGATCCCAAGTTGGTGGCAATGTTTTTGGGAGATAGTGAAAGCGAGCAACAAGGAAAAGGCGATAGCAACCTCATTAGCAAGAGTAATATGAGATGTCA
ACACTGTGCGGGTCCTCTCTCGAAGGATATGGAAACCAGTGCTTGGACAATTCCTCCTCTTATTAGGGATAGTTTCTCTATGATTGGCTCTGCTGTTGGTGGTACTGCCA
GTGCTTTTTATGGATTTAATCATGTGATGCCGGTTGTCCAGAGATCAGTGAAAGGGCCTATGTGGTTGCATTTTCTTATTGGTGTAAGTACCTTATTGCTTTCCATTGTT
ATAATTATGAACTGTTCCAAAATCTATTTCCAGGCTCCTCCTGTGATTGTGTTTTCTTCAGCTTGTGCAGGAATGGCAGGTGGTGCTGTTCCAGCTTTGGCCCAACTTTT
TTCATCATCTTATCATTCAGCCATGTCTCCTTCAAAAGATGACAAGACTCACGATTCAAGATCATCTTCTACCATGTAA
mRNA sequenceShow/hide mRNA sequence
AATATTGAGCCACACCTGCGGCGGCTATATATCTCCCTCGCGACACCGCCCGCGGCAGCCAGCACCGCTCGACGGCGACACACTCACGACGACAACTTCTGGGTTGCGAC
TTCGCTGCATCGGCAAGATCTGTAACTTCAAGACCTTTATGCGGTGATCGAGACCTACAGTGACTACCTGGTGCGCTAGCTCCCCTTGTGTGATGAACCACCAAGATCCC
AAGTTGGTGGCAATGTTTTTGGGAGATAGTGAAAGCGAGCAACAAGGAAAAGGCGATAGCAACCTCATTAGCAAGAGTAATATGAGATGTCAACACTGTGCGGGTCCTCT
CTCGAAGGATATGGAAACCAGTGCTTGGACAATTCCTCCTCTTATTAGGGATAGTTTCTCTATGATTGGCTCTGCTGTTGGTGGTACTGCCAGTGCTTTTTATGGATTTA
ATCATGTGATGCCGGTTGTCCAGAGATCAGTGAAAGGGCCTATGTGGTTGCATTTTCTTATTGGTGTAAGTACCTTATTGCTTTCCATTGTTATAATTATGAACTGTTCC
AAAATCTATTTCCAGGCTCCTCCTGTGATTGTGTTTTCTTCAGCTTGTGCAGGAATGGCAGGTGGTGCTGTTCCAGCTTTGGCCCAACTTTTTTCATCATCTTATCATTC
AGCCATGTCTCCTTCAAAAGATGACAAGACTCACGATTCAAGATCATCTTCTACCATGTAATTCAATATCAACTTTTTTCTTCATCTTATCATTCAGCCATGTCTTTTCA
ATCTTACCCATCTAGAATATATCAATACCATATATCGTTCGTATATCAACCGTTATTTTTTGATTCAGTGAGTAATATAACAAATAAAGTATATAGAAGACGAACACCTA
TCTTATAAGAAATGAAACTTTAGATATATT
Protein sequenceShow/hide protein sequence
MNHQDPKLVAMFLGDSESEQQGKGDSNLISKSNMRCQHCAGPLSKDMETSAWTIPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVQRSVKGPMWLHFLIGVSTLLLSIV
IIMNCSKIYFQAPPVIVFSSACAGMAGGAVPALAQLFSSSYHSAMSPSKDDKTHDSRSSSTM