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Carg12686 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12686
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription factor bHLH101-like
Genome locationCarg_Chr07:7396771..7398673
RNA-Seq ExpressionCarg12686
SyntenyCarg12686
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595594.1 Transcription factor ORG2, partial [Cucurbita argyrosperma subsp. sororia]2.5e-6665.04Show/hide
Query:  NPQSTNGRSSELFIQFSSPQPSHHVKIESCSPPSAGDGRHRGGGGCGGDDPVA-----------------------------------------------
        NPQSTN RSSELFIQFSSPQPSHHVK+ESCSPPSAGDGRHRGGGGCGGDDPVA                                               
Subjt:  NPQSTNGRSSELFIQFSSPQPSHHVKIESCSPPSAGDGRHRGGGGCGGDDPVA-----------------------------------------------

Query:  ---------HVEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLRENEALLQLTSNDTFKLKFSQILHSLDEEELL-------------
                 HVEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLRENEALLQLTSNDTFKLKFSQILHSLDEEELL             
Subjt:  ---------HVEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLRENEALLQLTSNDTFKLKFSQILHSLDEEELL-------------

Query:  --------AKPNTPSRVLQEILNRKF
                AKPNTPSRVLQEILNRKF
Subjt:  --------AKPNTPSRVLQEILNRKF

KAG7027567.1 hypothetical protein SDJN02_11581, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-78100Show/hide
Query:  NPQSTNGRSSELFIQFSSPQPSHHVKIESCSPPSAGDGRHRGGGGCGGDDPVAHVEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLR
        NPQSTNGRSSELFIQFSSPQPSHHVKIESCSPPSAGDGRHRGGGGCGGDDPVAHVEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLR
Subjt:  NPQSTNGRSSELFIQFSSPQPSHHVKIESCSPPSAGDGRHRGGGGCGGDDPVAHVEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLR

Query:  ENEALLQLTSNDTFKLKFSQILHSLDEEELLAKPNTPSRVLQEILNRKF
        ENEALLQLTSNDTFKLKFSQILHSLDEEELLAKPNTPSRVLQEILNRKF
Subjt:  ENEALLQLTSNDTFKLKFSQILHSLDEEELLAKPNTPSRVLQEILNRKF

XP_022925194.1 transcription factor bHLH101-like [Cucurbita moschata]2.8e-6563.72Show/hide
Query:  NPQSTNGRSSELFIQFSSPQPSHHVKIESCSPPSAGDGRHRGGGGCGGDDPVA-----------------------------------------------
        NPQSTNGRSSELFIQFSSP+PSHHVK+ESCSPPSAGDGRHRGGGGCGGDDPVA                                               
Subjt:  NPQSTNGRSSELFIQFSSPQPSHHVKIESCSPPSAGDGRHRGGGGCGGDDPVA-----------------------------------------------

Query:  ---------HVEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLRENEALLQLTSNDTFKLKFSQILHSLDEEELL-------------
                 HVEELRRRKQGLETKIN+ITHDQQKQVRK+KEAPWMGCSSCAVNWLRENEALLQLTSNDTFKLKFSQILHSLDE+ELL             
Subjt:  ---------HVEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLRENEALLQLTSNDTFKLKFSQILHSLDEEELL-------------

Query:  --------AKPNTPSRVLQEILNRKF
                AKPNTPSRVLQEILNRKF
Subjt:  --------AKPNTPSRVLQEILNRKF

XP_022966445.1 transcription factor bHLH101-like [Cucurbita maxima]9.3e-6161.06Show/hide
Query:  NPQSTNGRSSELFIQFSSPQPSHHVKIESCSPPSAGDGRHRGGGGCGGDDPVA-----------------------------------------------
        NPQSTNGRSSELFIQFSSPQPSHHVK+ESCSPPSAGDGRHRGGGG G DDPVA                                               
Subjt:  NPQSTNGRSSELFIQFSSPQPSHHVKIESCSPPSAGDGRHRGGGGCGGDDPVA-----------------------------------------------

Query:  ---------HVEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLRENEALLQLTSNDTFKLKFSQILHSLDEEELL-------------
                  VEELRRRKQGLETKIN+ITHDQQKQVRK+K+APWMGCSSCAVNWLRENEALLQLTSNDT KLKFSQILHSLDE+ELL             
Subjt:  ---------HVEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLRENEALLQLTSNDTFKLKFSQILHSLDEEELL-------------

Query:  --------AKPNTPSRVLQEILNRKF
                AKPNTPSRVLQEILN+ F
Subjt:  --------AKPNTPSRVLQEILNRKF

XP_023518049.1 transcription factor bHLH101-like [Cucurbita pepo subsp. pepo]1.5e-6362.39Show/hide
Query:  NPQSTNGRSSELFIQFSSPQPSHHVKIESCSPPSAGDGRHRGGGGCGGDDPVA-----------------------------------------------
        NPQSTNGRSSELFIQFSSPQPSHHVK+ESCSPPSAGDG HRGGGGCGGDDP+A                                               
Subjt:  NPQSTNGRSSELFIQFSSPQPSHHVKIESCSPPSAGDGRHRGGGGCGGDDPVA-----------------------------------------------

Query:  ---------HVEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLRENEALLQLTSNDTFKLKFSQILHSLDEEELL-------------
                 HVEELRRRKQGLETKIN++THDQQKQVRK+KEAPWMGCSSCAVNWLRENEALLQLTSNDTFKLKFSQIL SLDE+ELL             
Subjt:  ---------HVEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLRENEALLQLTSNDTFKLKFSQILHSLDEEELL-------------

Query:  --------AKPNTPSRVLQEILNRKF
                AKPNTPSRVLQEILNRKF
Subjt:  --------AKPNTPSRVLQEILNRKF

TrEMBL top hitse value%identityAlignment
A0A0A0KYH3 Uncharacterized protein7.8e-1348.72Show/hide
Query:  VEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLRENEALLQLTSNDT--FKLKFSQILHSLDEEELL---------------------
        VE LRRRK+GL TK+N    +  KQ+RK+ + PWM  S CAVNWL E EALLQ+   D    +L FSQIL SL+E+ LL                     
Subjt:  VEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLRENEALLQLTSNDT--FKLKFSQILHSLDEEELL---------------------

Query:  AKPNTPSRVLQEILNRK
        AK NT  RVLQEILN+K
Subjt:  AKPNTPSRVLQEILNRK

A0A1S3C1M0 transcription factor bHLH101-like2.5e-1146.15Show/hide
Query:  VEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLRENEALLQLTSNDT--FKLKFSQILHSLDEEELL---------------------
        VE LRRRK+GL TK+N    +  KQ+RK+ + PWM  S CAVNWL E EALLQ+   +    +L FSQIL SL+++ LL                     
Subjt:  VEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLRENEALLQLTSNDT--FKLKFSQILHSLDEEELL---------------------

Query:  AKPNTPSRVLQEILNRK
        AK N   RVLQEILN+K
Subjt:  AKPNTPSRVLQEILNRK

A0A5D3DDY1 Transcription factor bHLH101-like protein6.8e-0953.16Show/hide
Query:  VEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLRENEALLQLTSNDT--FKLKFSQILHSLDEEELL
        VE LRRRK+GL TK+N    +  KQ+RK+ + PWM  S CAVNWL E EALLQ+   +    +L FSQIL SL+++ LL
Subjt:  VEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLRENEALLQLTSNDT--FKLKFSQILHSLDEEELL

A0A6J1EBF8 transcription factor bHLH101-like1.4e-6563.72Show/hide
Query:  NPQSTNGRSSELFIQFSSPQPSHHVKIESCSPPSAGDGRHRGGGGCGGDDPVA-----------------------------------------------
        NPQSTNGRSSELFIQFSSP+PSHHVK+ESCSPPSAGDGRHRGGGGCGGDDPVA                                               
Subjt:  NPQSTNGRSSELFIQFSSPQPSHHVKIESCSPPSAGDGRHRGGGGCGGDDPVA-----------------------------------------------

Query:  ---------HVEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLRENEALLQLTSNDTFKLKFSQILHSLDEEELL-------------
                 HVEELRRRKQGLETKIN+ITHDQQKQVRK+KEAPWMGCSSCAVNWLRENEALLQLTSNDTFKLKFSQILHSLDE+ELL             
Subjt:  ---------HVEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLRENEALLQLTSNDTFKLKFSQILHSLDEEELL-------------

Query:  --------AKPNTPSRVLQEILNRKF
                AKPNTPSRVLQEILNRKF
Subjt:  --------AKPNTPSRVLQEILNRKF

A0A6J1HRN3 transcription factor bHLH101-like4.5e-6161.06Show/hide
Query:  NPQSTNGRSSELFIQFSSPQPSHHVKIESCSPPSAGDGRHRGGGGCGGDDPVA-----------------------------------------------
        NPQSTNGRSSELFIQFSSPQPSHHVK+ESCSPPSAGDGRHRGGGG G DDPVA                                               
Subjt:  NPQSTNGRSSELFIQFSSPQPSHHVKIESCSPPSAGDGRHRGGGGCGGDDPVA-----------------------------------------------

Query:  ---------HVEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLRENEALLQLTSNDTFKLKFSQILHSLDEEELL-------------
                  VEELRRRKQGLETKIN+ITHDQQKQVRK+K+APWMGCSSCAVNWLRENEALLQLTSNDT KLKFSQILHSLDE+ELL             
Subjt:  ---------HVEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLRENEALLQLTSNDTFKLKFSQILHSLDEEELL-------------

Query:  --------AKPNTPSRVLQEILNRKF
                AKPNTPSRVLQEILN+ F
Subjt:  --------AKPNTPSRVLQEILNRKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACCCTCAGTCTACAAACGGCCGCTCATCGGAGCTGTTCATTCAGTTCTCATCACCACAGCCATCTCATCATGTCAAGATTGAGAGCTGTTCTCCACCATCAGCTGGTGA
CGGTCGTCATCGTGGTGGCGGTGGCTGTGGCGGTGATGATCCGGTCGCTCACGTGGAGGAGCTAAGGAGAAGGAAGCAAGGGCTTGAGACAAAGATAAATTCCATAACTC
ATGACCAACAAAAGCAAGTGAGGAAAGACAAGGAGGCCCCATGGATGGGTTGTTCTTCATGTGCTGTGAATTGGCTAAGAGAAAATGAAGCATTGCTTCAACTAACTTCT
AATGATACCTTCAAACTCAAATTTTCACAAATTCTCCATTCTCTAGACGAAGAAGAACTTCTCGCTAAGCCAAATACTCCCTCAAGAGTGCTGCAAGAGATCTTGAATAG
AAAGTTC
mRNA sequenceShow/hide mRNA sequence
AACCCTCAGTCTACAAACGGCCGCTCATCGGAGCTGTTCATTCAGTTCTCATCACCACAGCCATCTCATCATGTCAAGATTGAGAGCTGTTCTCCACCATCAGCTGGTGA
CGGTCGTCATCGTGGTGGCGGTGGCTGTGGCGGTGATGATCCGGTCGCTCACGTGGAGGAGCTAAGGAGAAGGAAGCAAGGGCTTGAGACAAAGATAAATTCCATAACTC
ATGACCAACAAAAGCAAGTGAGGAAAGACAAGGAGGCCCCATGGATGGGTTGTTCTTCATGTGCTGTGAATTGGCTAAGAGAAAATGAAGCATTGCTTCAACTAACTTCT
AATGATACCTTCAAACTCAAATTTTCACAAATTCTCCATTCTCTAGACGAAGAAGAACTTCTCGCTAAGCCAAATACTCCCTCAAGAGTGCTGCAAGAGATCTTGAATAG
AAAGTTC
Protein sequenceShow/hide protein sequence
NPQSTNGRSSELFIQFSSPQPSHHVKIESCSPPSAGDGRHRGGGGCGGDDPVAHVEELRRRKQGLETKINSITHDQQKQVRKDKEAPWMGCSSCAVNWLRENEALLQLTS
NDTFKLKFSQILHSLDEEELLAKPNTPSRVLQEILNRKF