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Carg12691 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12691
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionthioredoxin-like 3-1, chloroplastic
Genome locationCarg_Chr07:7428234..7430021
RNA-Seq ExpressionCarg12691
SyntenyCarg12691
Gene Ontology termsGO:0009570 - chloroplast stroma (cellular component)
InterPro domainsIPR013766 - Thioredoxin domain
IPR036249 - Thioredoxin-like superfamily
IPR044253 - Thioredoxin-like 3-1/3-2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595600.1 Thioredoxin-like 3-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.6e-67100Show/hide
Query:  MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV
        MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV
Subjt:  MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV

Query:  LIDWMATWCRKCIYLKPKLEKLAADYLTK
        LIDWMATWCRKCIYLKPKLEKLAADYLTK
Subjt:  LIDWMATWCRKCIYLKPKLEKLAADYLTK

KAG7027572.1 Thioredoxin-like 3-1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]2.6e-67100Show/hide
Query:  MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV
        MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV
Subjt:  MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV

Query:  LIDWMATWCRKCIYLKPKLEKLAADYLTK
        LIDWMATWCRKCIYLKPKLEKLAADYLTK
Subjt:  LIDWMATWCRKCIYLKPKLEKLAADYLTK

XP_022924923.1 thioredoxin-like 3-1, chloroplastic [Cucurbita moschata]7.5e-6799.22Show/hide
Query:  MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV
        MSVLAATTAQILYSE HHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV
Subjt:  MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV

Query:  LIDWMATWCRKCIYLKPKLEKLAADYLTK
        LIDWMATWCRKCIYLKPKLEKLAADYLTK
Subjt:  LIDWMATWCRKCIYLKPKLEKLAADYLTK

XP_022966464.1 thioredoxin-like 3-1, chloroplastic [Cucurbita maxima]1.5e-6293.8Show/hide
Query:  MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV
        MSVLAA+TAQILYSEVHHNQHQI SNG RRCFVNRDFGSVLFGRRNGE+RRLRRRE +MG EAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV
Subjt:  MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV

Query:  LIDWMATWCRKCIYLKPKLEKLAADYLTK
        LIDWMATWCRKCIYLKPKLEKL ADYLTK
Subjt:  LIDWMATWCRKCIYLKPKLEKLAADYLTK

XP_023517975.1 thioredoxin-like 3-1, chloroplastic [Cucurbita pepo subsp. pepo]1.4e-6597.67Show/hide
Query:  MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV
        MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRE +MG EAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV
Subjt:  MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV

Query:  LIDWMATWCRKCIYLKPKLEKLAADYLTK
        LIDWMATWCRKCIYLKPKLEKLAADYLTK
Subjt:  LIDWMATWCRKCIYLKPKLEKLAADYLTK

TrEMBL top hitse value%identityAlignment
A0A1S3B504 thioredoxin-like 3-1, chloroplastic2.1e-3866.67Show/hide
Query:  MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV
        M VL A+++ ILY+++H  QHQ  SNG R  F+N DFG              RRREL++  EAGFWPDLSRPA VEMESI+DS+QLDRIL HAQ+LSQP+
Subjt:  MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV

Query:  LIDWMATWCRKCIYLKPKLEKLAADYLTK
        LIDWMATWCRKCIYLKPKLEKLAADY+TK
Subjt:  LIDWMATWCRKCIYLKPKLEKLAADYLTK

A0A5A7V069 Thioredoxin-like 3-12.1e-3866.67Show/hide
Query:  MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV
        M VL A+++ ILY+++H  QHQ  SNG R  F+N DFG              RRREL++  EAGFWPDLSRPA VEMESI+DS+QLDRIL HAQ+LSQP+
Subjt:  MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV

Query:  LIDWMATWCRKCIYLKPKLEKLAADYLTK
        LIDWMATWCRKCIYLKPKLEKLAADY+TK
Subjt:  LIDWMATWCRKCIYLKPKLEKLAADYLTK

A0A5D3C8R2 Thioredoxin-like 3-12.1e-3866.67Show/hide
Query:  MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV
        M VL A+++ ILY+++H  QHQ  SNG R  F+N DFG              RRREL++  EAGFWPDLSRPA VEMESI+DS+QLDRIL HAQ+LSQP+
Subjt:  MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV

Query:  LIDWMATWCRKCIYLKPKLEKLAADYLTK
        LIDWMATWCRKCIYLKPKLEKLAADY+TK
Subjt:  LIDWMATWCRKCIYLKPKLEKLAADYLTK

A0A6J1EDU4 thioredoxin-like 3-1, chloroplastic3.6e-6799.22Show/hide
Query:  MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV
        MSVLAATTAQILYSE HHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV
Subjt:  MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV

Query:  LIDWMATWCRKCIYLKPKLEKLAADYLTK
        LIDWMATWCRKCIYLKPKLEKLAADYLTK
Subjt:  LIDWMATWCRKCIYLKPKLEKLAADYLTK

A0A6J1HTV8 thioredoxin-like 3-1, chloroplastic7.1e-6393.8Show/hide
Query:  MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV
        MSVLAA+TAQILYSEVHHNQHQI SNG RRCFVNRDFGSVLFGRRNGE+RRLRRRE +MG EAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV
Subjt:  MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPV

Query:  LIDWMATWCRKCIYLKPKLEKLAADYLTK
        LIDWMATWCRKCIYLKPKLEKL ADYLTK
Subjt:  LIDWMATWCRKCIYLKPKLEKLAADYLTK

SwissProt top hitse value%identityAlignment
Q6Z7L3 Thioredoxin-like 3-1, chloroplastic1.1e-1551.19Show/hide
Query:  GRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLEKLAADY
        G   G+ RR  R +  +  EA FW D+S+P  VEME I+  E+LD  L  + E  QP++IDWMA+WCRKCIYLKP+LEK+A ++
Subjt:  GRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLEKLAADY

Q8VZT6 Thioredoxin-like 3-2, chloroplastic6.1e-1154.55Show/hide
Query:  PAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLEKLAADY
        P  VE+  I      D+++  AQ+L + V+I WMA WCRKCIYLKPKLEKLAA++
Subjt:  PAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLEKLAADY

Q9FG36 Thioredoxin-like 3-1, chloroplastic7.2e-2062.9Show/hide
Query:  FWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLEKLAADY
        FW ++++P  +EME I + E+LD +L+HA++LSQP++I+WMA+WCRKCIYLKPKLEKLAA+Y
Subjt:  FWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLEKLAADY

Arabidopsis top hitse value%identityAlignment
AT5G04260.1 WCRKC thioredoxin 24.3e-1254.55Show/hide
Query:  PAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLEKLAADY
        P  VE+  I      D+++  AQ+L + V+I WMA WCRKCIYLKPKLEKLAA++
Subjt:  PAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLEKLAADY

AT5G06690.1 WCRKC thioredoxin 15.1e-2162.9Show/hide
Query:  FWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLEKLAADY
        FW ++++P  +EME I + E+LD +L+HA++LSQP++I+WMA+WCRKCIYLKPKLEKLAA+Y
Subjt:  FWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLEKLAADY

AT5G06690.2 WCRKC thioredoxin 15.1e-2162.9Show/hide
Query:  FWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLEKLAADY
        FW ++++P  +EME I + E+LD +L+HA++LSQP++I+WMA+WCRKCIYLKPKLEKLAA+Y
Subjt:  FWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLEKLAADY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTGTTGGCTGCGACCACTGCTCAGATTCTGTACAGCGAAGTTCATCACAATCAACACCAAATTCCGAGCAATGGGGGGAGGCGGTGTTTTGTGAATAGAGATTT
TGGGTCTGTTTTATTTGGCCGGAGAAATGGAGAGCGGCGGAGGCTGCGGCGGAGGGAGTTGAAAATGGGGCCGGAAGCTGGGTTTTGGCCGGATCTGTCCCGGCCGGCGA
TGGTGGAGATGGAGTCCATCGAGGATTCCGAGCAGCTTGATCGGATTTTGGCTCACGCCCAGGAACTGTCTCAGCCGGTTCTTATCGACTGGATGGCAACGTGGTGTAGG
AAATGCATCTACTTGAAGCCTAAATTGGAGAAACTTGCTGCTGATTATCTTACCAAGTAA
mRNA sequenceShow/hide mRNA sequence
AATTTCAATCCCAAACCCCAAAAAACCTCAAAAAAGTAAAAGAAAAAACCCCTCTTCACAGATCGAAGCCATGACCTCCTAGAGAACAAGAAGAAGAGAGGATCTACAGA
TATGTCTGTGTTGGCTGCGACCACTGCTCAGATTCTGTACAGCGAAGTTCATCACAATCAACACCAAATTCCGAGCAATGGGGGGAGGCGGTGTTTTGTGAATAGAGATT
TTGGGTCTGTTTTATTTGGCCGGAGAAATGGAGAGCGGCGGAGGCTGCGGCGGAGGGAGTTGAAAATGGGGCCGGAAGCTGGGTTTTGGCCGGATCTGTCCCGGCCGGCG
ATGGTGGAGATGGAGTCCATCGAGGATTCCGAGCAGCTTGATCGGATTTTGGCTCACGCCCAGGAACTGTCTCAGCCGGTTCTTATCGACTGGATGGCAACGTGGTGTAG
GAAATGCATCTACTTGAAGCCTAAATTGGAGAAACTTGCTGCTGATTATCTTACCAAGTAACATTTATTATTTATTTTCTTTTTTTAACATTTCATTTATTTAATTATTT
TAATTATTTTAATTATTTACTAACTTTTTTCAGTGAAATTAAATATTTTTGCAGAGTAAAATTTTACTATGTGGATGTGAATAAGGTGCCTCAATCTCTGGTTAAACGTG
GAAACATCTCTAAAATGCCAACAATTCAGCTTTGGAAGGATGGAGAAATGAAAGCGGAAGTGATTGGAGGGCATAAAGCTTGGCTTGTGATCGAAGAAGTTAGAGAAATG
ATTCATAAGTTTATTTTATAATCGAGTTCGAGTTCCACACGAGAAGCACGTTCCTCATTTTGTTCGGTTGTTCAGTATCTAGGCAATGGTTCTTAAGACTTCATTATTTT
CGTTTATATGTTTTTATCTTCTGAAAATTTAATGTACATATATTATAAAAATAAATATCAATGTCGATGCAAATATAAGCTAATTTCAAGTTCATCCTATTTTTC
Protein sequenceShow/hide protein sequence
MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMGPEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCR
KCIYLKPKLEKLAADYLTK