; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg12700 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12700
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRNA polymerase II transcriptional coactivator KIWI-like
Genome locationCarg_Chr07:7525064..7527429
RNA-Seq ExpressionCarg12700
SyntenyCarg12700
Gene Ontology termsGO:0060261 - positive regulation of transcription initiation from RNA polymerase II promoter (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005667 - transcription factor complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR003173 - Transcriptional coactivator p15 (PC4), C-terminal
IPR009044 - ssDNA-binding transcriptional regulator
IPR045125 - RNA polymerase II transcriptional coactivator Sub1/Tcp4-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603408.1 RNA polymerase II transcriptional coactivator KIWI, partial [Cucurbita argyrosperma subsp. sororia]5.2e-4795.05Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDDEDH SEGDAPPKKTF+K+SDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKGISLSLDQWNVLRNHV+EIDKAVNEN
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

KAG7027581.1 RNA polymerase II transcriptional coactivator KIWI [Cucurbita argyrosperma subsp. argyrosperma]4.2e-49100Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

XP_022925285.1 RNA polymerase II transcriptional coactivator KIWI-like [Cucurbita moschata]2.3e-4797.03Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDDEDHASEGDAPPKKT KK+S+ETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

XP_022966500.1 RNA polymerase II transcriptional coactivator KIWI-like isoform X1 [Cucurbita maxima]1.4e-4797.03Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDDEDHASEGDAPPKKTFKK+S+ETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKG SLSLDQWNVLRNHVEEIDKAVNEN
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

XP_023518433.1 RNA polymerase II transcriptional coactivator KIWI-like [Cucurbita pepo subsp. pepo]1.6e-4899.01Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDDEDHASEGDAPPKKTFKK+SDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

TrEMBL top hitse value%identityAlignment
A0A6J1D5M3 RNA polymerase II transcriptional coactivator KIWI-like isoform X11.6e-4694.06Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDD++HASEGDAPPKKT KK+SDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKGISLS+DQWNVLRNHVEEIDKAVNEN
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

A0A6J1EHI0 RNA polymerase II transcriptional coactivator KIWI-like1.1e-4797.03Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDDEDHASEGDAPPKKT KK+S+ETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

A0A6J1EYI2 RNA polymerase II transcriptional coactivator KIWI-like isoform X11.2e-4694.06Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDDEDH  EGDAPPKKTF+K+SDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKGISLSLDQWNVLRNHV+EIDKAVNEN
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

A0A6J1HRT2 RNA polymerase II transcriptional coactivator KIWI-like isoform X16.6e-4897.03Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
        MSARGKRKDDEDHASEGDAPPKKTFKK+S+ETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKG SLSLDQWNVLRNHVEEIDKAVNEN
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

A0A6J1IRG1 RNA polymerase II transcriptional coactivator KIWI-like isoform X11.4e-4591.09Show/hide
Query:  MSARGKRKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN
        MSARGKR+DDEDH SEGDAPPKKTF+K+SDETDEIVVCEISKNR+V+VRNWQGKIVVDIREFYVKDGK+MPGKKGISLSLDQWNVLRNHV+EIDKAV+EN
Subjt:  MSARGKRKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNEN

Query:  S
        S
Subjt:  S

SwissProt top hitse value%identityAlignment
O65154 RNA polymerase II transcriptional coactivator KIWI4.1e-3165.42Show/hide
Query:  MSARGKRKDDE----DHASEGDAPPKKTFK--KNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEID
        MS+RGKRKD++    D  SE  AP KK  K   +SD++D+IVVC ISKNRRV VRNW GKI +DIREFYVKDGK +PGKKGISLS+DQWN LRNH E+I+
Subjt:  MSARGKRKDDE----DHASEGDAPPKKTFK--KNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEID

Query:  KAVNENS
        KA+++ S
Subjt:  KAVNENS

O65155 RNA polymerase II transcriptional coactivator KELP7.3e-1240.22Show/hide
Query:  KDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNE
        K++ED    GD    K  K+  D+ D +++C +S  RRV ++ ++GK +V IRE+Y KDGKE+P  KGISL+ +QW+  + ++  I+ AV +
Subjt:  KDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNE

P11031 Activated RNA polymerase II transcriptional coactivator p156.9e-1040.54Show/hide
Query:  KNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYV-KDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNE
        K S  + +  + +I K R V VR+++GKI++DIRE+++  +G+  PG+KGISL+++QW+ L+  + +ID AV +
Subjt:  KNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYV-KDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNE

Q5ZK63 Activated RNA polymerase II transcriptional coactivator p151.2e-0938.3Show/hide
Query:  RKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYV-KDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNE
        +K     +S+G A  K++   N DE     + +I K R V VR+++GK+++DIRE+++ ++G+  PG+KGISL+ +QWN L+  + +ID AV +
Subjt:  RKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYV-KDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNE

Q63396 Activated RNA polymerase II transcriptional coactivator p159.0e-1036.9Show/hide
Query:  GDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYV-KDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNE
        G++       K S  + +  + +I K R V VR+++GKI++DIRE+++  +G+  PG+KGISL+++QW+ L+  + +ID AV +
Subjt:  GDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYV-KDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNE

Arabidopsis top hitse value%identityAlignment
AT4G10920.1 transcriptional coactivator p15 (PC4) family protein (KELP)5.2e-1340.22Show/hide
Query:  KDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNE
        K++ED    GD    K  K+  D+ D +++C +S  RRV ++ ++GK +V IRE+Y KDGKE+P  KGISL+ +QW+  + ++  I+ AV +
Subjt:  KDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNE

AT5G09240.1 ssDNA-binding transcriptional regulator1.2e-2254.13Show/hide
Query:  MSARGKRKDDEDHA------SEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMP--GKKGISLSLDQWNVLRNHVEE
        MS  GKRKD++  A      SE  APPKK   K +DE ++I +C + KNRRV VRN  G+I + IR+F+VKDG  +P   K+GISLSL+QWN LRNH E+
Subjt:  MSARGKRKDDEDHA------SEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMP--GKKGISLSLDQWNVLRNHVEE

Query:  IDKAVNENS
        IDKA++E S
Subjt:  IDKAVNENS

AT5G09240.2 ssDNA-binding transcriptional regulator4.1e-1843.07Show/hide
Query:  MSARGKRKDDEDHA------SEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMP--GKKGISLSLD-----------
        MS  GKRKD++  A      SE  APPKK   K +DE ++I +C + KNRRV VRN  G+I + IR+F+VKDG  +P   K+GISLSL+           
Subjt:  MSARGKRKDDEDHA------SEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMP--GKKGISLSLD-----------

Query:  -----------------QWNVLRNHVEEIDKAVNENS
                         QWN LRNH E+IDKA++E S
Subjt:  -----------------QWNVLRNHVEEIDKAVNENS

AT5G09250.1 ssDNA-binding transcriptional regulator2.9e-3265.42Show/hide
Query:  MSARGKRKDDE----DHASEGDAPPKKTFK--KNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEID
        MS+RGKRKD++    D  SE  AP KK  K   +SD++D+IVVC ISKNRRV VRNW GKI +DIREFYVKDGK +PGKKGISLS+DQWN LRNH E+I+
Subjt:  MSARGKRKDDE----DHASEGDAPPKKTFK--KNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEID

Query:  KAVNENS
        KA+++ S
Subjt:  KAVNENS

AT5G09250.2 ssDNA-binding transcriptional regulator4.0e-2165.43Show/hide
Query:  MSARGKRKDDE----DHASEGDAPPKKTFK--KNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKG
        MS+RGKRKD++    D  SE  AP KK  K   +SD++D+IVVC ISKNRRV VRNW GKI +DIREFYVKDGK +PGKKG
Subjt:  MSARGKRKDDE----DHASEGDAPPKKTFK--KNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCAAGAGGAAAGCGAAAGGACGATGAAGACCACGCATCCGAAGGAGATGCTCCTCCGAAGAAGACATTTAAGAAAAATTCCGACGAAACCGACGAAATCGTCGT
CTGCGAGATTTCGAAGAACCGTAGAGTTATGGTGAGGAACTGGCAAGGAAAGATTGTGGTGGATATTCGGGAGTTTTATGTCAAAGATGGAAAGGAAATGCCTGGAAAAA
AAGGCATCTCGCTATCCTTGGATCAGTGGAACGTTCTTCGAAATCACGTAGAAGAAATCGACAAAGCTGTTAATGAAAATTCGTGA
mRNA sequenceShow/hide mRNA sequence
AAAGGAGGAAGAGATGTCTGCAAGAGGAAAGCGAAAGGACGATGAAGACCACGCATCCGAAGGAGATGCTCCTCCGAAGAAGACATTTAAGAAAAATTCCGACGAAACCG
ACGAAATCGTCGTCTGCGAGATTTCGAAGAACCGTAGAGTTATGGTGAGGAACTGGCAAGGAAAGATTGTGGTGGATATTCGGGAGTTTTATGTCAAAGATGGAAAGGAA
ATGCCTGGAAAAAAAGGCATCTCGCTATCCTTGGATCAGTGGAACGTTCTTCGAAATCACGTAGAAGAAATCGACAAAGCTGTTAATGAAAATTCGTGAGGAAATTAGAT
CGACATCTTATGTTGATATTAGTAGTAACTGAATCACTCTGTAGGGCTATTCGACTTTATGAGGACGGAAATATGACCTTTTGTACAGCTAATGGGCTTGTTTTTGTGGG
CATGAAGACCAAAGAGCAGGTATTAGCATTTATATCTACATTAACTGCATCACTTAGATTGACATTTTGATATTGTAGACCAGAACATGATATTATAATATATTATGCCA
TAACTGAC
Protein sequenceShow/hide protein sequence
MSARGKRKDDEDHASEGDAPPKKTFKKNSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKEMPGKKGISLSLDQWNVLRNHVEEIDKAVNENS