; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg12704 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12704
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description60S ribosomal protein L35a-1-like
Genome locationCarg_Chr07:7547821..7550656
RNA-Seq ExpressionCarg12704
SyntenyCarg12704
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015031 - protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001780 - Ribosomal protein L35A
IPR009000 - Translation protein, beta-barrel domain superfamily
IPR018266 - Ribosomal protein L35Ae, conserved site
IPR038661 - Ribosomal protein L35A superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442180.1 PREDICTED: 60S ribosomal protein L35a-1-like [Cucumis melo]2.0e-5595.54Show/hide
Query:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG
        MVKGS+GER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSR HGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
        DK+RVFMYPSNI
Subjt:  DKVRVFMYPSNI

XP_022925254.1 60S ribosomal protein L35a-1-like [Cucurbita moschata]4.7e-57100Show/hide
Query:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG
        MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
        DKVRVFMYPSNI
Subjt:  DKVRVFMYPSNI

XP_022928725.1 60S ribosomal protein L35a-1-like [Cucurbita moschata]8.8e-5696.43Show/hide
Query:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG
        MVKGS+GER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSR HGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
        DK+RVFMYPSNI
Subjt:  DKVRVFMYPSNI

XP_022967923.1 60S ribosomal protein L35a-1-like [Cucurbita maxima]3.4e-5595.54Show/hide
Query:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG
        MVKG +GER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSR HGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
        DK+RVFMYPSNI
Subjt:  DKVRVFMYPSNI

XP_038883794.1 60S ribosomal protein L35a-1-like [Benincasa hispida]5.7e-5595.54Show/hide
Query:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG
        MVKG +GERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSR HGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
        DK+RVFMYPSNI
Subjt:  DKVRVFMYPSNI

TrEMBL top hitse value%identityAlignment
A0A1S3B4N4 60S ribosomal protein L35a-1-like9.5e-5695.54Show/hide
Query:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG
        MVKGS+GER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSR HGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
        DK+RVFMYPSNI
Subjt:  DKVRVFMYPSNI

A0A5A7TGR3 60S ribosomal protein L35a-1-like9.5e-5695.54Show/hide
Query:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG
        MVKGS+GER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNT+EEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSR HGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
        DK+RVFMYPSNI
Subjt:  DKVRVFMYPSNI

A0A6J1EBM3 60S ribosomal protein L35a-1-like2.3e-57100Show/hide
Query:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG
        MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
        DKVRVFMYPSNI
Subjt:  DKVRVFMYPSNI

A0A6J1EL43 60S ribosomal protein L35a-1-like4.3e-5696.43Show/hide
Query:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG
        MVKGS+GER+RLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSR HGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
        DK+RVFMYPSNI
Subjt:  DKVRVFMYPSNI

A0A6J1HSC2 60S ribosomal protein L35a-1-like2.3e-57100Show/hide
Query:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG
        MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG
Subjt:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
        DKVRVFMYPSNI
Subjt:  DKVRVFMYPSNI

SwissProt top hitse value%identityAlignment
P41056 60S ribosomal protein L33-B8.1e-2855.24Show/hide
Query:  ERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMGDKVRVFM
        E  RLYV+G  L Y+RSK    P  SLI+IEGV T +E  +Y GKR+AY+Y+A  +  G+  R +WGKV+R HGNSG+VRA F++NLP K+ G  VR+F+
Subjt:  ERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMGDKVRVFM

Query:  YPSNI
        YPSNI
Subjt:  YPSNI

P51422 60S ribosomal protein L35a-48.9e-5183.78Show/hide
Query:  VKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMGD
        +KG +GERVRLYVRGTVLGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKRLAYIYKAK K+NG+HYRCIWGKV+R HGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMGD

Query:  KVRVFMYPSNI
        +VRVFMYPSNI
Subjt:  KVRVFMYPSNI

Q9C912 60S ribosomal protein L35a-36.2e-5283.93Show/hide
Query:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG
        MVKG +GERVRLYVRGT+LGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKR+AYIYKAK K+NG+HYRCIWGKV+R HGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
         +VRVFMYPSNI
Subjt:  DKVRVFMYPSNI

Q9FZH0 60S ribosomal protein L35a-26.8e-5184.68Show/hide
Query:  VKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMGD
        +KG +GERVRLYVRGTVLGYKRSKSNQYP TSLIQIEGVNT+EEV WY GKRLAYIYKAK K+NG+HYRCIWGKV+R HGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMGD

Query:  KVRVFMYPSNI
        +VRVFMYPSNI
Subjt:  KVRVFMYPSNI

Q9LMK0 60S ribosomal protein L35a-16.2e-5283.04Show/hide
Query:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG
        MVKG +GERVRLYVRGT+LGYKRSKSNQYP TSL+Q+EGVNT EEV+WY GKR+AYIYKAK K+NG+HYRCIWGKV+R HGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
         +VRVFMYPSNI
Subjt:  DKVRVFMYPSNI

Arabidopsis top hitse value%identityAlignment
AT1G07070.1 Ribosomal protein L35Ae family protein4.4e-5383.04Show/hide
Query:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG
        MVKG +GERVRLYVRGT+LGYKRSKSNQYP TSL+Q+EGVNT EEV+WY GKR+AYIYKAK K+NG+HYRCIWGKV+R HGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
         +VRVFMYPSNI
Subjt:  DKVRVFMYPSNI

AT1G41880.1 Ribosomal protein L35Ae family protein4.8e-5284.68Show/hide
Query:  VKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMGD
        +KG +GERVRLYVRGTVLGYKRSKSNQYP TSLIQIEGVNT+EEV WY GKRLAYIYKAK K+NG+HYRCIWGKV+R HGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMGD

Query:  KVRVFMYPSNI
        +VRVFMYPSNI
Subjt:  KVRVFMYPSNI

AT1G74270.1 Ribosomal protein L35Ae family protein4.4e-5383.93Show/hide
Query:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG
        MVKG +GERVRLYVRGT+LGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKR+AYIYKAK K+NG+HYRCIWGKV+R HGNSG+VRAKF SNLPPKSMG
Subjt:  MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMG

Query:  DKVRVFMYPSNI
         +VRVFMYPSNI
Subjt:  DKVRVFMYPSNI

AT3G55750.1 Ribosomal protein L35Ae family protein6.3e-5283.78Show/hide
Query:  VKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMGD
        +KG +GERVRLYVRGTVLGYKRSKSNQYP TSL+QIEGVNT+EEV WY GKRLAYIYKAK K+NG+HYRCIWGKV+R HGNSG+VR+KF SNLPPKSMG 
Subjt:  VKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMGD

Query:  KVRVFMYPSNI
        +VRVFMYPSNI
Subjt:  KVRVFMYPSNI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGGGAAGCAAGGGAGAAAGAGTCAGACTCTACGTCAGAGGAACTGTCCTTGGCTACAAGAGGTCGAAGTCAAACCAGTATCCAAGAACATCACTGATCCAGAT
TGAAGGTGTGAATACCAAGGAAGAGGTCGCGTGGTATGCTGGAAAACGCTTGGCATACATTTACAAGGCCAAAGTGAAGCAAAATGGAACTCACTATCGATGCATTTGGG
GCAAAGTATCCAGGGCTCATGGTAACAGTGGCATTGTTCGAGCTAAGTTCAAGTCAAACTTGCCCCCAAAATCCATGGGTGATAAAGTTAGGGTATTTATGTACCCCAGC
AATATTTGA
mRNA sequenceShow/hide mRNA sequence
AAATCATTTTGGCCCTCAACCTCCACTATAAAAGCTTCCTCTTCTACTGGCGCTCGCCTTCTCCGCCGAACACAGCTCCATCTTCCGCACTTCAACCTCCAAATCGAAGT
GGTCGTTTTCTTGAACCTTAGACTGCGGCAGCCATGGTGAAGGGAAGCAAGGGAGAAAGAGTCAGACTCTACGTCAGAGGAACTGTCCTTGGCTACAAGAGGTCGAAGTC
AAACCAGTATCCAAGAACATCACTGATCCAGATTGAAGGTGTGAATACCAAGGAAGAGGTCGCGTGGTATGCTGGAAAACGCTTGGCATACATTTACAAGGCCAAAGTGA
AGCAAAATGGAACTCACTATCGATGCATTTGGGGCAAAGTATCCAGGGCTCATGGTAACAGTGGCATTGTTCGAGCTAAGTTCAAGTCAAACTTGCCCCCAAAATCCATG
GGTGATAAAGTTAGGGTATTTATGTACCCCAGCAATATTTGAGTTCCTCTGATGAGCTAGCTAGAGGTCAGGTTTCATTTCTTTGTGGACTTGGATGGAACAATATTTTT
CTTTTACTTTCTTCCTTCTGGACCCAATGTTTAGGTGATGATGTTTTCATGTAAAACTTGACTAAATTTTCGACGTTCATTATGGAATATTACTTTCAATTTTGACCGAG
CTTCATATTAAGGTTGAGTTAAAATGGTAGTCACTTAAATTTAGACGGATATTTGTTGATGCGTTTAATATTTTGGTCTATATTGTTATCTCTACAAATAATACGGACTC
GTAAAAGAAGAAAAAAAGCATTCATATTAACTTTTAATATTTTTATTTATGAAATATTTAATTATATAGTTTTTTTAAAGGTTGACAGTTAGTAAACCAGTAAACCATGT
CTGTGATTGTCGCTTTGTTCTCCTCTTATTCTTTGTTGGACGGTTTGACTTGTGTTGCTCTCATTATTCTATTTTCTGTCTCCCTCATTCTCGTTAGTTTTTTTTTTTTT
T
Protein sequenceShow/hide protein sequence
MVKGSKGERVRLYVRGTVLGYKRSKSNQYPRTSLIQIEGVNTKEEVAWYAGKRLAYIYKAKVKQNGTHYRCIWGKVSRAHGNSGIVRAKFKSNLPPKSMGDKVRVFMYPS
NI