; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg12723 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12723
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRING/FYVE/PHD zinc finger superfamily protein, putative isoform 1
Genome locationCarg_Chr07:7716350..7716876
RNA-Seq ExpressionCarg12723
SyntenyCarg12723
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060071.1 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 1 [Cucumis melo var. makuwa]2.1e-2083.82Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVETLE+LL  +A HT+R YPRFR AFSRLFAS FRVS SR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR

KAE8649764.1 hypothetical protein Csa_012384 [Cucumis sativus]7.9e-3166.13Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR---------------LNCDFCLEIIRDDGFSF
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVETLE+LL  +A HT+R YPRFR AFSRLFAS+FRVS SR               +   F   II DDGFSF
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR---------------LNCDFCLEIIRDDGFSF

Query:  RFLSFFSDSVSDLFRALEFSNSLF
        RF+SFF DSVSDL +AL+  +SLF
Subjt:  RFLSFFSDSVSDLFRALEFSNSLF

KAG6595630.1 hypothetical protein SDJN03_12183, partial [Cucurbita argyrosperma subsp. sororia]1.6e-55100Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSRLNCDFCLEIIRDDGFSFRFLSFFSDSVSDLFR
        MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSRLNCDFCLEIIRDDGFSFRFLSFFSDSVSDLFR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSRLNCDFCLEIIRDDGFSFRFLSFFSDSVSDLFR

Query:  ALEFSNSLFPLCSRVSK
        ALEFSNSLFPLCSRVSK
Subjt:  ALEFSNSLFPLCSRVSK

KAG6603254.1 hypothetical protein SDJN03_03863, partial [Cucurbita argyrosperma subsp. sororia]3.1e-1979.41Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR
        MLQLFFAVAFSA PLT YVPPIRSLNLFVETLE+L R +A HT R YPRFR AFSR+F S+FRVS SR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR

KAG7037385.1 hypothetical protein SDJN02_01010, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-1979.41Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR
        MLQLFFAVAFSA PLT YVPPIRSLNLFVETLE+L R +A HT R YPRFR AFSR+F S+FRVS SR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR

TrEMBL top hitse value%identityAlignment
A0A0A0KZF7 Uncharacterized protein3.8e-3166.13Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR---------------LNCDFCLEIIRDDGFSF
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVETLE+LL  +A HT+R YPRFR AFSRLFAS+FRVS SR               +   F   II DDGFSF
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR---------------LNCDFCLEIIRDDGFSF

Query:  RFLSFFSDSVSDLFRALEFSNSLF
        RF+SFF DSVSDL +AL+  +SLF
Subjt:  RFLSFFSDSVSDLFRALEFSNSLF

A0A2C9V7E1 Uncharacterized protein4.8e-1876.92Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVS
        MLQLFFAVAFSAVPLTLYVPPIRSLN FVET+E+LLR +A ++LR YPRFR AFSR+F+++FR+S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVS

A0A5A7V2T5 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 11.0e-2083.82Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR
        MLQLFFAVAFSAVPLTLYVPPIRSL+LFVETLE+LL  +A HT+R YPRFR AFSRLFAS FRVS SR
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSR

A0A6P6AMB2 uncharacterized protein LOC111310902 isoform X11.4e-1774.24Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSN
        MLQLFFAVAFSAVPLTLYVPPIRSLNLFVET+E++LR +  +TLR YPR R  FSR+F SIF +S+
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSN

B9SL52 Uncharacterized protein2.8e-1874.24Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSN
        MLQ+FFAVAFSAVPLTLYVPPIRSLNLF+ET+EELLR S ++T++ YPR R AFSRLF+++FR+S+
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52105.1 unknown protein4.6e-1355.38Show/hide
Query:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVS
        MLQLFF +AFSA PLTLY+PPIR L +FVET+EE+  +   ++ R++PR R A+SRL    F  S
Subjt:  MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCCGCAGTGCCATTGACGCTCTATGTGCCGCCAATTCGGAGCCTCAATTTGTTCGTCGAAACCCTAGAGGAACTTCTCCG
TGACTCCGCCGCTCATACTCTCAGAGTTTATCCTCGTTTTCGCCAAGCCTTCTCTCGCCTCTTCGCCTCTATTTTCCGCGTTTCTAATTCCAGATTGAACTGTGATTTTT
GTTTAGAAATCATTCGCGATGATGGATTTTCGTTTCGTTTCCTTTCGTTCTTCTCTGATTCTGTTTCCGATCTGTTTCGAGCTTTGGAATTTTCAAATTCTCTGTTTCCT
CTCTGTTCTCGTGTAAGTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCCGCAGTGCCATTGACGCTCTATGTGCCGCCAATTCGGAGCCTCAATTTGTTCGTCGAAACCCTAGAGGAACTTCTCCG
TGACTCCGCCGCTCATACTCTCAGAGTTTATCCTCGTTTTCGCCAAGCCTTCTCTCGCCTCTTCGCCTCTATTTTCCGCGTTTCTAATTCCAGATTGAACTGTGATTTTT
GTTTAGAAATCATTCGCGATGATGGATTTTCGTTTCGTTTCCTTTCGTTCTTCTCTGATTCTGTTTCCGATCTGTTTCGAGCTTTGGAATTTTCAAATTCTCTGTTTCCT
CTCTGTTCTCGTGTAAGTAAGTGA
Protein sequenceShow/hide protein sequence
MLQLFFAVAFSAVPLTLYVPPIRSLNLFVETLEELLRDSAAHTLRVYPRFRQAFSRLFASIFRVSNSRLNCDFCLEIIRDDGFSFRFLSFFSDSVSDLFRALEFSNSLFP
LCSRVSK