CuGenDBv2

Gene ID	Carg12733
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	WD_REPEATS_REGION domain-containing protein
Genome location	Carg_Chr07:7800998..7801360
RNA-Seq Expression	Carg12733
Synteny	Carg12733
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022151653.1 uncharacterized protein LOC111019565 [Momordica charantia]

4.5e-58

90.83

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Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSP PF  ASNMLRHRLLP+LRTRGGAA GQSRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAMSGSGSSESD
        LERLEMEN+ +S SGSSESD
Subjt:  LERLEMENLAMSGSGSSESD

XP_022925065.1 uncharacterized protein LOC111432424 [Cucurbita moschata]

4.7e-63

100

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Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAMSGSGSSESD
        LERLEMENLAMSGSGSSESD
Subjt:  LERLEMENLAMSGSGSSESD

XP_022966491.1 uncharacterized protein LOC111466129 [Cucurbita maxima]

4.0e-62

98.33

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Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAMSGSGSSESD
        LERLEMENLA+SGSGSSESD
Subjt:  LERLEMENLAMSGSGSSESD

XP_023517134.1 uncharacterized protein LOC111780983 [Cucurbita pepo subsp. pepo]

5.2e-62

98.33

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Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAMSGSGSSESD
        LERLEMENLAMS SGSSESD
Subjt:  LERLEMENLAMSGSGSSESD

XP_038881129.1 uncharacterized protein LOC120072731 [Benincasa hispida]

4.1e-59

93.33

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Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPF  ASNMLRHRLLPSLRTRGGAA GQSRWTSPGHE++PKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAMSGSGSSESD
        LERLEME L +SGSGSSESD
Subjt:  LERLEMENLAMSGSGSSESD

TrEMBL top hits

e value

%identity

Alignment

A0A067KZT1 Uncharacterized protein

6.2e-53

86.44

Show/hide

Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSP PF TAS MLR RL  SLRTRGG A G SRWTSPGHEE+PKGYLFNRTPPP GQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAMSGSGSSE
        LERLEME L +SGSG SE
Subjt:  LERLEMENLAMSGSGSSE

A0A6J1DCT8 uncharacterized protein LOC111019565

2.2e-58

90.83

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Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSP PF  ASNMLRHRLLP+LRTRGGAA GQSRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAMSGSGSSESD
        LERLEMEN+ +S SGSSESD
Subjt:  LERLEMENLAMSGSGSSESD

A0A6J1EGU8 uncharacterized protein LOC111432424

2.3e-63

100

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Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAMSGSGSSESD
        LERLEMENLAMSGSGSSESD
Subjt:  LERLEMENLAMSGSGSSESD

A0A6J1HPH2 uncharacterized protein LOC111466129

1.9e-62

98.33

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Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAMSGSGSSESD
        LERLEMENLA+SGSGSSESD
Subjt:  LERLEMENLAMSGSGSSESD

I3NMS3 Uncharacterized protein

1.1e-52

86.44

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Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPS  PF TAS+MLR RL  SLRTRGGAA G SRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDL+IETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAMSGSGSSE
        LERLEME L  SGSG SE
Subjt:  LERLEMENLAMSGSGSSE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G42310.1 unknown protein

1.7e-42

68.97

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Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPS      A+  LR+R+       G  + G SRW +PGHEE+PKGY  NRTPP PGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDL+IETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAMSGSGS
        LERLEME LA +G  S
Subjt:  LERLEMENLAMSGSGS

AT3G57785.1 unknown protein

1.2e-43

71.55

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Query:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        M S  P   A+  LR+R+    R+ G  +TG SRW +PGHEE+PKGY  NRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDL+IETWAHQKA
Subjt:  MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMENLAMSGSGS
        LERLEME LA +G  S
Subjt:  LERLEMENLAMSGSGS

Sequences

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CDS sequence

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ATGCCGTCGCCAACGCCCTTTGCAACCGCCTCAAATATGCTCCGGCACCGCCTTCTCCCTTCTCTCAGGACCCGCGGTGGCGCCGCCACAGGCCAGAGCCGGTGGACCAG
TCCCGGCCACGAGGAGAAGCCAAAGGGCTATCTTTTCAATCGGACGCCGCCTCCGCCAGGTCAGTCCCGTAAATGGGAGGATTGGGAGCTTCCTTGTTATGTTACTAGTT
TTCTTACTATCGTGATTCTTGGCGTTGGCCTCAACGCCAAGCCTGATCTCACAATTGAGACTTGGGCTCACCAGAAGGCCCTAGAGCGTCTTGAGATGGAGAATCTGGCT
ATGTCTGGCTCTGGATCATCTGAATCTGATTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MPSPTPFATASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEKPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMENLA
MSGSGSSESD

Carg12733 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome