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Carg12757 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12757
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNAC domain protein
Genome locationCarg_Chr09:4861111..4861410
RNA-Seq ExpressionCarg12757
SyntenyCarg12757
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036871.1 uncharacterized protein E6C27_scaffold20G001820 [Cucumis melo var. makuwa]4.8e-2973Show/hide
Query:  MPTIFQSQPQPDRRPSLAA-AAGREPSRSIRSTCRSFSFSGMVRSGRNVMTAGGDKFRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMSMAEA
        MPTIFQSQP P R PS+A   AGR  +R++RSTCRS SF GMVR GRN+M   GD+ RRNQG REVLRRALMPP+R+PTLRW+NFRPTPSRLS MSMAE+
Subjt:  MPTIFQSQPQPDRRPSLAA-AAGREPSRSIRSTCRSFSFSGMVRSGRNVMTAGGDKFRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMSMAEA

KAG6607862.1 hypothetical protein SDJN03_01204, partial [Cucurbita argyrosperma subsp. sororia]3.2e-2573Show/hide
Query:  MPTIFQSQPQPDRRPSLAAA---AGREPSRSIRSTCRSFSFSGMVRSGRNVMTAGGDKFRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMSMA
        MPTIFQSQ QP  RPS A A    GR  SRS+RS CRS SF G+ R GRNV TA GDK RR QGRRE+LRRAL PP R+PTLRWLNFR TPSRLSNMSMA
Subjt:  MPTIFQSQPQPDRRPSLAAA---AGREPSRSIRSTCRSFSFSGMVRSGRNVMTAGGDKFRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMSMA

KAG7024857.1 hypothetical protein SDJN02_13676, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-46100Show/hide
Query:  MPTIFQSQPQPDRRPSLAAAAGREPSRSIRSTCRSFSFSGMVRSGRNVMTAGGDKFRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMSMAEA
        MPTIFQSQPQPDRRPSLAAAAGREPSRSIRSTCRSFSFSGMVRSGRNVMTAGGDKFRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMSMAEA
Subjt:  MPTIFQSQPQPDRRPSLAAAAGREPSRSIRSTCRSFSFSGMVRSGRNVMTAGGDKFRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMSMAEA

KGN60027.2 hypothetical protein Csa_001878 [Cucumis sativus]2.5e-3075Show/hide
Query:  MPTIFQSQPQPDRRPSLAAAAGREP--SRSIRSTCRSFSFSGMVRSGRNVMTAGGDKFRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMSMAE
        MPTIFQSQP P R PS+   AGREP  +R++RSTCRSFSF GMVR GRN+M   GD+ RRNQG REVLRRALMPP+R+PTLRW+NFRPTPSRLS MSMAE
Subjt:  MPTIFQSQPQPDRRPSLAAAAGREP--SRSIRSTCRSFSFSGMVRSGRNVMTAGGDKFRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMSMAE

XP_011652880.1 uncharacterized protein LOC105435142 [Cucumis sativus]1.9e-3074.26Show/hide
Query:  MPTIFQSQPQPDRRPSLAAAAGREP--SRSIRSTCRSFSFSGMVRSGRNVMTAGGDKFRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMSMAE
        MPTIFQSQP P R PS+   AGREP  +R++RSTCRSFSF GMVR GRN+M   GD+ RRNQG REVLRRALMPP+R+PTLRW+NFRPTPSRLS MSMAE
Subjt:  MPTIFQSQPQPDRRPSLAAAAGREP--SRSIRSTCRSFSFSGMVRSGRNVMTAGGDKFRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMSMAE

Query:  A
        +
Subjt:  A

TrEMBL top hitse value%identityAlignment
A0A0A0LD23 Uncharacterized protein9.4e-3174.26Show/hide
Query:  MPTIFQSQPQPDRRPSLAAAAGREP--SRSIRSTCRSFSFSGMVRSGRNVMTAGGDKFRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMSMAE
        MPTIFQSQP P R PS+   AGREP  +R++RSTCRSFSF GMVR GRN+M   GD+ RRNQG REVLRRALMPP+R+PTLRW+NFRPTPSRLS MSMAE
Subjt:  MPTIFQSQPQPDRRPSLAAAAGREP--SRSIRSTCRSFSFSGMVRSGRNVMTAGGDKFRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMSMAE

Query:  A
        +
Subjt:  A

A0A5A7T5L7 Uncharacterized protein2.3e-2973Show/hide
Query:  MPTIFQSQPQPDRRPSLAA-AAGREPSRSIRSTCRSFSFSGMVRSGRNVMTAGGDKFRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMSMAEA
        MPTIFQSQP P R PS+A   AGR  +R++RSTCRS SF GMVR GRN+M   GD+ RRNQG REVLRRALMPP+R+PTLRW+NFRPTPSRLS MSMAE+
Subjt:  MPTIFQSQPQPDRRPSLAA-AAGREPSRSIRSTCRSFSFSGMVRSGRNVMTAGGDKFRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMSMAEA

A0A6M2EHA0 Uncharacterized protein1.1e-1059.42Show/hide
Query:  RSTCRSFSFSGMVRSGRNVMTAGGDK-FRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMSMA
        RSTC   +  G VR  ++     GDK  RR+Q  +E+LRRAL PP R+ TLRW NFRPTPSRLSNMSMA
Subjt:  RSTCRSFSFSGMVRSGRNVMTAGGDK-FRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMSMA

A0A6N2MHB8 Uncharacterized protein6.3e-1151.76Show/hide
Query:  RRPSLAAAAGREPSRSIRSTCRSFSFSGMVRSGRNVMTAGGDKFRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMSMA
        RR + AA+    P    RSTC   +  G VR  ++      D+ RR+Q  RE+LRRAL PP R+ TLRW NF+PTPSRLSNMSMA
Subjt:  RRPSLAAAAGREPSRSIRSTCRSFSFSGMVRSGRNVMTAGGDKFRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMSMA

B9N1L2 Uncharacterized protein8.3e-1146.3Show/hide
Query:  MPTIFQSQP----QPDRRPSLAAAAGREPSRSI-------RSTCRSFSFSGMVRSGRNVMTAGGDKFRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPS
        M TI Q Q     QP  R SL        +  +       RSTC   +  G VR  ++      DK RRNQ   E+LRRAL PP R+ TLRW NF+PTPS
Subjt:  MPTIFQSQP----QPDRRPSLAAAAGREPSRSI-------RSTCRSFSFSGMVRSGRNVMTAGGDKFRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPS

Query:  RLSNMSMA
        RLSNMSMA
Subjt:  RLSNMSMA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15518.1 unknown protein1.7e-0845.71Show/hide
Query:  IRSTCRSFSFSGMVRSGRNVMTAGGDK---FRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMS
        +R  C      G  +  R+      D+    + + G REVLRRAL PP R+  LRWLNFRPTPSRL  MS
Subjt:  IRSTCRSFSFSGMVRSGRNVMTAGGDK---FRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTACCATTTTCCAGTCTCAGCCCCAGCCTGATCGGAGGCCCTCCCTCGCCGCCGCCGCCGGCAGAGAACCCAGCCGGAGTATTAGATCCACTTGCAGGAGCTTTAG
TTTTAGTGGGATGGTTAGGAGTGGCCGGAATGTGATGACGGCTGGTGGAGATAAGTTCCGGCGGAATCAAGGGAGGAGAGAGGTTTTGAGAAGGGCGTTGATGCCTCCCA
CCCGGAAACCCACTCTCCGGTGGCTGAATTTCCGTCCAACTCCTAGTCGGCTTTCCAATATGTCTATGGCGGAAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTACCATTTTCCAGTCTCAGCCCCAGCCTGATCGGAGGCCCTCCCTCGCCGCCGCCGCCGGCAGAGAACCCAGCCGGAGTATTAGATCCACTTGCAGGAGCTTTAG
TTTTAGTGGGATGGTTAGGAGTGGCCGGAATGTGATGACGGCTGGTGGAGATAAGTTCCGGCGGAATCAAGGGAGGAGAGAGGTTTTGAGAAGGGCGTTGATGCCTCCCA
CCCGGAAACCCACTCTCCGGTGGCTGAATTTCCGTCCAACTCCTAGTCGGCTTTCCAATATGTCTATGGCGGAAGCTTAA
Protein sequenceShow/hide protein sequence
MPTIFQSQPQPDRRPSLAAAAGREPSRSIRSTCRSFSFSGMVRSGRNVMTAGGDKFRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMSMAEA