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Carg12758 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12758
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiondefensin-like protein 1
Genome locationCarg_Chr09:4863583..4863971
RNA-Seq ExpressionCarg12758
SyntenyCarg12758
Gene Ontology termsGO:0031640 - killing of cells of other organism (biological process)
GO:0050832 - defense response to fungus (biological process)
InterPro domainsIPR003614 - Knottin, scorpion toxin-like
IPR008176 - Defensin, plant
IPR036574 - Knottin, scorpion toxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024858.1 Defensin-like protein 19, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-41100Show/hide
Query:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
Subjt:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

XP_008454663.1 PREDICTED: defensin-like protein 1 [Cucumis melo]2.5e-3485.71Show/hide
Query:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        MAK + + AKM VAFLFL AL LSMN K GVVEAKVCERRSKTWSGWCG+T HCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
Subjt:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

XP_022935763.1 defensin-like protein 1 [Cucurbita moschata]1.5e-3996.43Show/hide
Query:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        MAKALAS AKMAVAFLFL ALMLSMNG+LGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
Subjt:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

XP_022976615.1 defensin-like protein 1 [Cucurbita maxima]1.3e-3895.24Show/hide
Query:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        MAKALA+ AKMAVAFLFL ALMLSMN KLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
Subjt:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

XP_023535147.1 defensin-like protein 1 [Cucurbita pepo subsp. pepo]1.4e-3792.86Show/hide
Query:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        MAKALA+ AKMAVAF+FL ALMLS N KLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
Subjt:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

TrEMBL top hitse value%identityAlignment
A0A0A0LFX9 Knot1 domain-containing protein1.6e-3485.71Show/hide
Query:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        MAK + + AKM VA LFL ALMLSMN K GVVEAKVCERRSKTWSGWCGNT HCDRQCKNWEGA HGACHAQFPGRACFCYFNC
Subjt:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

A0A1S3BZX7 defensin-like protein 11.2e-3485.71Show/hide
Query:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        MAK + + AKM VAFLFL AL LSMN K GVVEAKVCERRSKTWSGWCG+T HCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
Subjt:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

A0A5A7T656 Defensin-like protein 11.2e-3485.71Show/hide
Query:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        MAK + + AKM VAFLFL AL LSMN K GVVEAKVCERRSKTWSGWCG+T HCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
Subjt:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

A0A6J1FBE9 defensin-like protein 17.2e-4096.43Show/hide
Query:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        MAKALAS AKMAVAFLFL ALMLSMNG+LGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
Subjt:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

A0A6J1IJY9 defensin-like protein 16.1e-3995.24Show/hide
Query:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        MAKALA+ AKMAVAFLFL ALMLSMN KLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
Subjt:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

SwissProt top hitse value%identityAlignment
P0C8Y4 Defensin-like protein 18.2e-1768Show/hide
Query:  KVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        ++CE+ SKTWSG CGNT HCD QCK+WEGA HGACH +     CFCYFNC
Subjt:  KVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

P22357 Anther-specific protein SF18 (Fragment)8.5e-1453.57Show/hide
Query:  LGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        +  V  K+CE+ SKTW G C +T  CD++C +WEGAKHGACH +     CFCYF+C
Subjt:  LGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

P82787 Defensin-like protein 191.1e-2164.29Show/hide
Query:  FLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        FL LS  +++ + ++  VE ++CERRSKTW+G+CGNT  CD QCK WE A HGACHAQFPG ACFCYFNC
Subjt:  FLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

Q7M1F2 Defensin-like protein 17.7e-1567.35Show/hide
Query:  VCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        +CER S TW+G CGNT HCD QC+NWE AKHGACH +   + CFCYFNC
Subjt:  VCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

Q7M1F3 Defensin-like protein 16.5e-1465.96Show/hide
Query:  ERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        ER S+TWSG CGNT+HCD+QC++WE A HGACH +     CFCYFNC
Subjt:  ERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

Arabidopsis top hitse value%identityAlignment
AT1G19610.1 Arabidopsis defensin-like protein7.9e-2364.29Show/hide
Query:  FLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        FL LS  +++ + ++  VE ++CERRSKTW+G+CGNT  CD QCK WE A HGACHAQFPG ACFCYFNC
Subjt:  FLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

AT1G75830.1 low-molecular-weight cysteine-rich 671.3e-1247.06Show/hide
Query:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEA-KVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        MAK+         A +F +AL   M     VVEA K+CER S TWSG CGN++ C  QC N E A+HG+C+  FP   C CYF C
Subjt:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEA-KVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

AT2G26010.1 plant defensin 1.34.3e-1345.88Show/hide
Query:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEA-KVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        MAK+ A      + FLF + ++ +      +VEA K+CE+ S TWSG CGN++ C  QC N EGAKHG+C+  FP   C CYF C
Subjt:  MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEA-KVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

AT5G44420.1 plant defensin 1.21.6e-1243.21Show/hide
Query:  LASFAKMAVAFLFLSALMLSMNGKLGVVEA-KVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        +A FA + +  +F + ++ +      +VEA K+CE+ S TWSG CGN++ C  QC N EGAKHG+C+  FP   C CY  C
Subjt:  LASFAKMAVAFLFLSALMLSMNGKLGVVEA-KVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC

AT5G44430.1 plant defensin 1.2C5.7e-1346.58Show/hide
Query:  VAFLFLSALMLSMNGKLGVVEA-KVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC
        + FLF + ++ +      +VEA K+CE+ S TWSG CGN++ C  QC N EGAKHG+C+  FP   C CY  C
Subjt:  VAFLFLSALMLSMNGKLGVVEA-KVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGGCTTTGGCTAGCTTTGCTAAGATGGCTGTTGCTTTCCTCTTCCTCTCCGCCCTCATGCTTTCCATGAACGGGAAGCTCGGGGTGGTGGAGGCAAAGGTGTG
CGAGAGGCGGAGCAAGACGTGGTCGGGGTGGTGCGGGAACACGAGCCATTGCGATCGACAATGCAAGAATTGGGAAGGTGCCAAACATGGAGCTTGCCATGCCCAATTTC
CTGGAAGGGCTTGTTTTTGCTACTTCAACTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGGCTTTGGCTAGCTTTGCTAAGATGGCTGTTGCTTTCCTCTTCCTCTCCGCCCTCATGCTTTCCATGAACGGGAAGCTCGGGGTGGTGGAGGCAAAGGTGTG
CGAGAGGCGGAGCAAGACGTGGTCGGGGTGGTGCGGGAACACGAGCCATTGCGATCGACAATGCAAGAATTGGGAAGGTGCCAAACATGGAGCTTGCCATGCCCAATTTC
CTGGAAGGGCTTGTTTTTGCTACTTCAACTGTTGA
Protein sequenceShow/hide protein sequence
MAKALASFAKMAVAFLFLSALMLSMNGKLGVVEAKVCERRSKTWSGWCGNTSHCDRQCKNWEGAKHGACHAQFPGRACFCYFNC