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Carg12779 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12779
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr09:5025482..5028407
RNA-Seq ExpressionCarg12779
SyntenyCarg12779
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592004.1 hypothetical protein SDJN03_14350, partial [Cucurbita argyrosperma subsp. sororia]2.9e-49100Show/hide
Query:  CSCCKDPLTILSSDKKRWAERNQKQILYEFQALSLAMENRCFGITKHFLVIFMIFKSPFGPSCQVIGKGRQAIICNNADDDPVVEENMHGMNYVSI
        CSCCKDPLTILSSDKKRWAERNQKQILYEFQALSLAMENRCFGITKHFLVIFMIFKSPFGPSCQVIGKGRQAIICNNADDDPVVEENMHGMNYVSI
Subjt:  CSCCKDPLTILSSDKKRWAERNQKQILYEFQALSLAMENRCFGITKHFLVIFMIFKSPFGPSCQVIGKGRQAIICNNADDDPVVEENMHGMNYVSI

KAG7024879.1 hypothetical protein SDJN02_13698, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-63100Show/hide
Query:  CKCWNYEDMQQLKLSTILLSIECSCCKDPLTILSSDKKRWAERNQKQILYEFQALSLAMENRCFGITKHFLVIFMIFKSPFGPSCQVIGKGRQAIICNNA
        CKCWNYEDMQQLKLSTILLSIECSCCKDPLTILSSDKKRWAERNQKQILYEFQALSLAMENRCFGITKHFLVIFMIFKSPFGPSCQVIGKGRQAIICNNA
Subjt:  CKCWNYEDMQQLKLSTILLSIECSCCKDPLTILSSDKKRWAERNQKQILYEFQALSLAMENRCFGITKHFLVIFMIFKSPFGPSCQVIGKGRQAIICNNA

Query:  DDDPVVEENMHGMNYVSI
        DDDPVVEENMHGMNYVSI
Subjt:  DDDPVVEENMHGMNYVSI

XP_038896213.1 uncharacterized protein LOC120084489 [Benincasa hispida]1.6e-2671Show/hide
Query:  IECSCCKDPLTILSSDKKRWAERNQKQILYEFQALSLAMENRCFGITKHFLVIFMIFKSPFGPSCQVIGKGRQAIICNNAD--DDPVVEENMHGMNYVSI
        I CSCCKDPL ILSSDKKRWAERNQK ILYEFQALSLAMENRCFGITK FLVIFMIFKS FGPSCQ           +NAD  DDP V    H  N V +
Subjt:  IECSCCKDPLTILSSDKKRWAERNQKQILYEFQALSLAMENRCFGITKHFLVIFMIFKSPFGPSCQVIGKGRQAIICNNAD--DDPVVEENMHGMNYVSI

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGCAAGTGTTGGAACTACGAAGACATGCAACAGTTAAAATTGTCAACCATTCTTCTTAGCATAGAGTGTTCGTGCTGTAAGGACCCACTGACTATCCTATCAAGCGACAA
GAAGCGATGGGCTGAAAGGAACCAGAAACAAATATTATATGAATTCCAAGCACTTAGCTTAGCGATGGAAAATCGTTGCTTTGGAATCACTAAACACTTTCTTGTCATCT
TCATGATTTTTAAATCTCCTTTTGGTCCATCATGTCAGGTAATTGGCAAGGGGAGGCAGGCCATCATTTGTAATAATGCTGATGATGATCCTGTTGTCGAGGAAAACATG
CATGGAATGAACTACGTGTCGATATGA
mRNA sequenceShow/hide mRNA sequence
TGCAAGTGTTGGAACTACGAAGACATGCAACAGTTAAAATTGTCAACCATTCTTCTTAGCATAGAGTGTTCGTGCTGTAAGGACCCACTGACTATCCTATCAAGCGACAA
GAAGCGATGGGCTGAAAGGAACCAGAAACAAATATTATATGAATTCCAAGCACTTAGCTTAGCGATGGAAAATCGTTGCTTTGGAATCACTAAACACTTTCTTGTCATCT
TCATGATTTTTAAATCTCCTTTTGGTCCATCATGTCAGGTAATTGGCAAGGGGAGGCAGGCCATCATTTGTAATAATGCTGATGATGATCCTGTTGTCGAGGAAAACATG
CATGGAATGAACTACGTGTCGATATGA
Protein sequenceShow/hide protein sequence
CKCWNYEDMQQLKLSTILLSIECSCCKDPLTILSSDKKRWAERNQKQILYEFQALSLAMENRCFGITKHFLVIFMIFKSPFGPSCQVIGKGRQAIICNNADDDPVVEENM
HGMNYVSI