CuGenDBv2

Gene ID	Carg12803
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Vascular-related unknown protein 4
Genome location	Carg_Chr09:5188847..5190291
RNA-Seq Expression	Carg12803
Synteny	Carg12803
Gene Ontology terms	GO:0010089 - xylem development (biological process)
InterPro domains	IPR039280 - VASCULAR-RELATED UNKNOWN PROTEIN

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7024902.1 hypothetical protein SDJN02_13722, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.3e-76

100

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Query:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLLENHDGAAMDPGFSCKDHINLFKKRKMIYE
        MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLLENHDGAAMDPGFSCKDHINLFKKRKMIYE
Subjt:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLLENHDGAAMDPGFSCKDHINLFKKRKMIYE

Query:  LLVHERRETGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ
        LLVHERRETGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ
Subjt:  LLVHERRETGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ

XP_022937320.1 vascular-related unknown protein 4-like isoform X1 [Cucurbita moschata]

3.3e-68

75.56

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Query:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLLENHDGAAMDPGFSCKDHINLFKKRKMIYE
        MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYP+ADAASSVVDHKLLENHDGAAMDPGFSCKDHIN FKKRKMIYE
Subjt:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLLENHDGAAMDPGFSCKDHINLFKKRKMIYE

Query:  LL---------------------------------------VHERRETGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ
        +                                        VHERRE GDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ
Subjt:  LL---------------------------------------VHERRETGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ

XP_022976591.1 vascular-related unknown protein 4-like isoform X1 [Cucurbita maxima]

4.2e-63

72.22

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Query:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLLENHDGAAMDPGFSCKDHINLFKKRKMIYE
        MAKESSAHTS+ HGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSS+P SPDQSYPVADAASSVVDHKLL NHDGAAM PGFSCKDHIN FKKRKMIYE
Subjt:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLLENHDGAAMDPGFSCKDHINLFKKRKMIYE

Query:  LL---------------------------------------VHERRETGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ
        LL                                       V ERR+ GDLIGIGSEYTELKKRGLCLVPFSMI+NYMDQ
Subjt:  LL---------------------------------------VHERRETGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ

XP_022976592.1 vascular-related unknown protein 4-like isoform X2 [Cucurbita maxima]

1.1e-55

71.01

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Query:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLLENHDGAAMDPGFSCKDHINLFKKRKMIYE
        MAKESSAHTS+ HGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSS+P SPDQSYPVADAASSVVDHKLL NHDGAAM PGFSCKDHIN FKKRKMIYE
Subjt:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLLENHDGAAMDPGFSCKDHINLFKKRKMIYE

Query:  LLVHER-------------------------RETGDLIGIGSEY---TELKKRGLCLVPFSMILNYMDQ
        LLV +                          R  G LI    +     ELKKRGLCLVPFSMI+NYMDQ
Subjt:  LLVHER-------------------------RETGDLIGIGSEY---TELKKRGLCLVPFSMILNYMDQ

XP_023534855.1 vascular-related unknown protein 4-like isoform X1 [Cucurbita pepo subsp. pepo]

8.2e-59

73.96

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Query:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLLENHDGAAMDPGFSCKDHINLFKKRKMIYE
        MAKESSAHTSV HGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSS+PLSPDQSYPVADAASSVVDHKLL NHDGAAMDPGFSCKDHINLFKKRKMIYE
Subjt:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLLENHDGAAMDPGFSCKDHINLFKKRKMIYE

Query:  LLVHER-------------------------RETGDLIGIGSE---YTELKKRGLCLVPFSMILNYMDQ
        LLV +                          R  G LI    +    TELKKRGLCLVPFSMI+NYMDQ
Subjt:  LLVHER-------------------------RETGDLIGIGSE---YTELKKRGLCLVPFSMILNYMDQ

TrEMBL top hits

e value

%identity

Alignment

A0A6J1FA17 Uncharacterized protein

2.3e-51

94.29

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Query:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLLENHDGAAMDPGFSCKDHINLFKKRKMIYE
        MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYP+ADAASSVVDHKLLENHDGAAMDPGFSCKDHIN FKKRKMIYE
Subjt:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLLENHDGAAMDPGFSCKDHINLFKKRKMIYE

Query:  LLVHE
        + V +
Subjt:  LLVHE

A0A6J1FG95 Uncharacterized protein

1.6e-68

75.56

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Query:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLLENHDGAAMDPGFSCKDHINLFKKRKMIYE
        MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYP+ADAASSVVDHKLLENHDGAAMDPGFSCKDHIN FKKRKMIYE
Subjt:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLLENHDGAAMDPGFSCKDHINLFKKRKMIYE

Query:  LL---------------------------------------VHERRETGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ
        +                                        VHERRE GDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ
Subjt:  LL---------------------------------------VHERRETGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ

A0A6J1IG62 Uncharacterized protein

5.4e-56

71.01

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Query:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLLENHDGAAMDPGFSCKDHINLFKKRKMIYE
        MAKESSAHTS+ HGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSS+P SPDQSYPVADAASSVVDHKLL NHDGAAM PGFSCKDHIN FKKRKMIYE
Subjt:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLLENHDGAAMDPGFSCKDHINLFKKRKMIYE

Query:  LLVHER-------------------------RETGDLIGIGSEY---TELKKRGLCLVPFSMILNYMDQ
        LLV +                          R  G LI    +     ELKKRGLCLVPFSMI+NYMDQ
Subjt:  LLVHER-------------------------RETGDLIGIGSEY---TELKKRGLCLVPFSMILNYMDQ

A0A6J1IHA8 Uncharacterized protein

2.0e-63

72.22

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Query:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLLENHDGAAMDPGFSCKDHINLFKKRKMIYE
        MAKESSAHTS+ HGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSS+P SPDQSYPVADAASSVVDHKLL NHDGAAM PGFSCKDHIN FKKRKMIYE
Subjt:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLLENHDGAAMDPGFSCKDHINLFKKRKMIYE

Query:  LL---------------------------------------VHERRETGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ
        LL                                       V ERR+ GDLIGIGSEYTELKKRGLCLVPFSMI+NYMDQ
Subjt:  LL---------------------------------------VHERRETGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ

A0A6J1IMM8 Uncharacterized protein

7.1e-48

91.43

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Query:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLLENHDGAAMDPGFSCKDHINLFKKRKMIYE
        MAKESSAHTS+ HGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSS+P SPDQSYPVADAASSVVDHKLL NHDGAAM PGFSCKDHIN FKKRKMIYE
Subjt:  MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLLENHDGAAMDPGFSCKDHINLFKKRKMIYE

Query:  LLVHE
        LLV +
Subjt:  LLVHE

SwissProt top hits

e value

%identity

Alignment

Q5BPG5 Vascular-related unknown protein 4

1.9e-05

27.78

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Query:  SAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLL--ENHDGAAMDPGFSCKDHINLFKKRKM------
        S H +     DQ+ EES WT+YFEDF            S S   +    S  V+DAAS V   K L     +G+ +D   +    I   +   +      
Subjt:  SAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLL--ENHDGAAMDPGFSCKDHINLFKKRKM------

Query:  ------IYELL---VHERRETGDLIG-----------IGSEYTELKKRGLCLVPFSMILNYM
              +Y ++    +  R  G ++G            G    +LKK+GLCLVP SM+ N++
Subjt:  ------IYELL---VHERRETGDLIG-----------IGSEYTELKKRGLCLVPFSMILNYM

Arabidopsis top hits

e value

%identity

Alignment

AT5G54790.1 unknown protein

1.3e-06

27.78

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Query:  SAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLL--ENHDGAAMDPGFSCKDHINLFKKRKM------
        S H +     DQ+ EES WT+YFEDF            S S   +    S  V+DAAS V   K L     +G+ +D   +    I   +   +      
Subjt:  SAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLL--ENHDGAAMDPGFSCKDHINLFKKRKM------

Query:  ------IYELL---VHERRETGDLIG-----------IGSEYTELKKRGLCLVPFSMILNYM
              +Y ++    +  R  G ++G            G    +LKK+GLCLVP SM+ N++
Subjt:  ------IYELL---VHERRETGDLIG-----------IGSEYTELKKRGLCLVPFSMILNYM

Sequences

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CDS sequence

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ATGGCCAAAGAAAGCTCCGCCCATACTTCCGTCTGCCACGGCGGCGATCAGTCGTCGGAGGAGAGTGGTTGGACCATCTACTTTGAAGATTTCCTCAACAACCACCACCC
TACTAATCAACCACCCACCTCCTTCTCTTCTTTTCCTCTCTCTCCCGATCAAAGCTACCCTGTCGCCGACGCTGCTTCCTCCGTCGTGGACCACAAACTACTCGAAAACC
ACGACGGAGCCGCCATGGATCCCGGGTTTAGCTGCAAGGATCATATCAACTTGTTCAAGAAGAGGAAGATGATCTATGAGTTGTTGGTACATGAGAGAAGAGAAACAGGT
GATTTAATTGGAATTGGCAGTGAGTACACAGAATTGAAGAAAAGAGGGCTTTGCTTAGTACCTTTTTCTATGATACTTAATTATATGGATCAATAA

mRNA sequence

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Protein sequence

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MAKESSAHTSVCHGGDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPVADAASSVVDHKLLENHDGAAMDPGFSCKDHINLFKKRKMIYELLVHERRETG
DLIGIGSEYTELKKRGLCLVPFSMILNYMDQ

Carg12803 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome