CuGenDBv2

Gene ID	Carg12809
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	SBP-type domain-containing protein
Genome location	Carg_Chr09:5231000..5231554
RNA-Seq Expression	Carg12809
Synteny	Carg12809
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6592032.1 hypothetical protein SDJN03_14378, partial [Cucurbita argyrosperma subsp. sororia]

6.2e-91

98.91

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Query:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN
        MVQKLQPIKGGGGSINVGATGTISSLMMRELESMR DPKKSVTPRIK SSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN
Subjt:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN

Query:  NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA
        NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA
Subjt:  NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA

KAG7024908.1 hypothetical protein SDJN02_13728, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.0e-93

100

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Query:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN
        MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN
Subjt:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN

Query:  NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA
        NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA
Subjt:  NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA

XP_022937400.1 uncharacterized protein LOC111443703 [Cucurbita moschata]

1.8e-90

98.37

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Query:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN
        MVQKLQPIKGGGGSINVGATGTISSLMMRELESMR DPKKSVTPRIK  SSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN
Subjt:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN

Query:  NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA
        NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA
Subjt:  NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA

XP_022976588.1 uncharacterized protein LOC111476940 [Cucurbita maxima]

7.9e-86

94.57

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Query:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN
        MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRS PKK V  +IK  SSS+TRTVSSAASIPNRL QSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN
Subjt:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN

Query:  NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA
        NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDG+SYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA
Subjt:  NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA

XP_023536516.1 uncharacterized protein LOC111797670 [Cucurbita pepo subsp. pepo]

2.9e-88

96.2

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Query:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN
        MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRS+PKK VTP++K  SSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN
Subjt:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN

Query:  NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA
        NRSFGKSHNATKAGSRDV RMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA
Subjt:  NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LAQ8 Uncharacterized protein

3.6e-68

79.35

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Query:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN
        MVQKLQPIKGGGGS+ VGATGTISSLMMRELESMRS  KK VT + KSSS+++T TVSS               AASIP RL QSKSF EVS+RRYN+VN
Subjt:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN

Query:  NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA
        NRSFG SHNATK GSRDVHRMPML SNDVYTDG+SYREKPERKGLRAV IVDVKCNNPDRAW+SRPLSSRLRKLGFSKLSETFA
Subjt:  NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA

A0A1S3BYW8 uncharacterized protein LOC103494914

8.9e-67

78.26

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Query:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN
        MVQKLQPIKGGGGSI VGATGTISSLMMRELESMRS  KK VT + KSSS+++T T  S+A+              SIP RL QSKSF EVS+RRYN+VN
Subjt:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN

Query:  NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA
        NRSFG SHNATK GSRDVHRMPML SNDVYTDG+SYREKPERKGLRAV IVDVKCNNPDRAW+SRPLSSRLRKLGFSKLSETFA
Subjt:  NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA

A0A5D3B9E2 Uncharacterized protein

8.9e-67

78.26

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Query:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN
        MVQKLQPIKGGGGSI VGATGTISSLMMRELESMRS  KK VT + KSSS+++T T  S+A+              SIP RL QSKSF EVS+RRYN+VN
Subjt:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN

Query:  NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA
        NRSFG SHNATK GSRDVHRMPML SNDVYTDG+SYREKPERKGLRAV IVDVKCNNPDRAW+SRPLSSRLRKLGFSKLSETFA
Subjt:  NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA

A0A6J1FA89 uncharacterized protein LOC111443703

8.8e-91

98.37

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Query:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN
        MVQKLQPIKGGGGSINVGATGTISSLMMRELESMR DPKKSVTPRIK  SSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN
Subjt:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN

Query:  NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA
        NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA
Subjt:  NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA

A0A6J1INY9 uncharacterized protein LOC111476940

3.8e-86

94.57

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Query:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN
        MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRS PKK V  +IK  SSS+TRTVSSAASIPNRL QSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN
Subjt:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVN

Query:  NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA
        NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDG+SYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA
Subjt:  NRSFGKSHNATKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G54850.1 unknown protein

1.7e-25

38.54

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Query:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIP---NRLQQSKSFDEVSNRRYN
        MVQKL+ IKGGGGSI +GATGT+++LM REL+SM+    K+ T R   ++   +    +++S P R +  KS D AS     N ++  K  +  +  + +
Subjt:  MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIP---NRLQQSKSFDEVSNRRYN

Query:  TV--NNRSFGKSHNATKA------------------GSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFS
         +  +N    K HNA                      ++  H++PMLGS +V   G   RE    K +  V IVDVKC NPDRAW++ P++SRL+KLGFS
Subjt:  TV--NNRSFGKSHNATKA------------------GSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFS

Query:  KLSET
        KL+E+
Subjt:  KLSET

Sequences

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CDS sequence

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ATGGTTCAGAAACTGCAACCTATCAAAGGAGGTGGAGGATCCATCAATGTTGGAGCCACCGGAACGATTAGCTCCCTAATGATGAGGGAATTAGAGTCTATGAGATCCGA
CCCGAAAAAGTCGGTAACTCCCAGAATCAAATCTTCATCTTCATCTTCTACTAGGACTGTTTCATCTGCTGCTTCCATTCCTAACAGACTACAACAAAGTAAATCGTTCG
ACGCTGCATCCATTCCTAACAGACTACAACAAAGTAAATCGTTCGACGAGGTAAGCAATAGAAGGTATAATACCGTTAATAACCGAAGCTTTGGGAAGTCTCATAATGCT
ACTAAAGCCGGTTCGAGGGATGTCCATCGTATGCCAATGCTTGGTTCTAATGATGTTTATACAGATGGGCATAGCTATAGAGAGAAACCAGAAAGGAAAGGACTTAGAGC
AGTTCCAATTGTGGACGTTAAGTGTAATAACCCGGATAGAGCTTGGTCTAGCCGCCCTCTATCAAGTCGACTCAGAAAACTCGGTTTTTCAAAACTATCAGAAACCTTCG
CTTGA

mRNA sequence

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Protein sequence

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MVQKLQPIKGGGGSINVGATGTISSLMMRELESMRSDPKKSVTPRIKSSSSSSTRTVSSAASIPNRLQQSKSFDAASIPNRLQQSKSFDEVSNRRYNTVNNRSFGKSHNA
TKAGSRDVHRMPMLGSNDVYTDGHSYREKPERKGLRAVPIVDVKCNNPDRAWSSRPLSSRLRKLGFSKLSETFA

Carg12809 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome