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Carg12823 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12823
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein translation factor SUI1 homolog
Genome locationCarg_Chr09:5316227..5317286
RNA-Seq ExpressionCarg12823
SyntenyCarg12823
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsIPR001950 - SUI1 domain
IPR005874 - Eukaryotic translation initiation factor SUI1
IPR036877 - SUI1 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024922.1 Protein translation factor SUI1-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-65100Show/hide
Query:  MFSFLSSFFLPCSFDLFRAFLVFSFLIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKI
        MFSFLSSFFLPCSFDLFRAFLVFSFLIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKI
Subjt:  MFSFLSSFFLPCSFDLFRAFLVFSFLIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKI

Query:  IQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
        IQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Subjt:  IQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF

XP_004139787.1 protein translation factor SUI1 homolog 1 [Cucumis sativus]9.1e-5298.13Show/hide
Query:  FLIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKD
        F IPSAFDPFADAKDSDAPGTK YVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKD
Subjt:  FLIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKD

Query:  QIKIHGF
        QIKIHGF
Subjt:  QIKIHGF

XP_022936190.1 protein translation factor SUI1 homolog 1 [Cucurbita moschata]5.3e-5298.13Show/hide
Query:  FLIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKD
        F IPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQD+ELGKIIQLQGDQRKNVSQFLVQAGLVKKD
Subjt:  FLIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKD

Query:  QIKIHGF
        QIKIHGF
Subjt:  QIKIHGF

XP_022976609.1 protein translation factor SUI1 homolog 1 [Cucurbita maxima]2.4e-5299.07Show/hide
Query:  FLIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKD
        F IPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKD
Subjt:  FLIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKD

Query:  QIKIHGF
        QIKIHGF
Subjt:  QIKIHGF

XP_023536045.1 protein translation factor SUI1 homolog 1 [Cucurbita pepo subsp. pepo]5.3e-5298.13Show/hide
Query:  FLIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKD
        F IPSAFDPFAD+KDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKD
Subjt:  FLIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKD

Query:  QIKIHGF
        QIKIHGF
Subjt:  QIKIHGF

TrEMBL top hitse value%identityAlignment
A0A0A0K771 SUI1 domain-containing protein4.4e-5298.13Show/hide
Query:  FLIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKD
        F IPSAFDPFADAKDSDAPGTK YVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKD
Subjt:  FLIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKD

Query:  QIKIHGF
        QIKIHGF
Subjt:  QIKIHGF

A0A1S3BI45 protein translation factor SUI1 homolog 1-like4.4e-5298.13Show/hide
Query:  FLIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKD
        F IPSAFDPFADAKDSDAPGTK YVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKD
Subjt:  FLIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKD

Query:  QIKIHGF
        QIKIHGF
Subjt:  QIKIHGF

A0A5D3DHR8 SUI1 domain-containing protein4.4e-5292.98Show/hide
Query:  RAFLVFSFLIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQ
        R  +   F IPSAFDPFADAKDSDAPGTK YVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQ
Subjt:  RAFLVFSFLIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQ

Query:  AGLVKKDQIKIHGF
        AGLVKKDQIKIHGF
Subjt:  AGLVKKDQIKIHGF

A0A6J1FCX8 protein translation factor SUI1 homolog 12.6e-5298.13Show/hide
Query:  FLIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKD
        F IPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQD+ELGKIIQLQGDQRKNVSQFLVQAGLVKKD
Subjt:  FLIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKD

Query:  QIKIHGF
        QIKIHGF
Subjt:  QIKIHGF

A0A6J1IJY4 protein translation factor SUI1 homolog 11.2e-5299.07Show/hide
Query:  FLIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKD
        F IPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKD
Subjt:  FLIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKD

Query:  QIKIHGF
        QIKIHGF
Subjt:  QIKIHGF

SwissProt top hitse value%identityAlignment
A6MZM2 Protein translation factor SUI1 homolog6.8e-4276.85Show/hide
Query:  IPSAFDPFADAKDSD---APGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKK
        IP+AFDPFA+A   D   A G+K YVH+R+QQRNG+K LTTVQGLKKEFSY KILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKK
Subjt:  IPSAFDPFADAKDSD---APGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKK

Query:  DQIKIHGF
        + IKIHGF
Subjt:  DQIKIHGF

P41568 Protein translation factor SUI1 homolog 13.6e-4381.13Show/hide
Query:  IPSAFDPFADAKDSDA-PGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQ
        +P+AFDPFADA   D+  GTK YVHIRVQQRNG+K LTTVQGLKKE+SY KILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD 
Subjt:  IPSAFDPFADAKDSDA-PGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQ

Query:  IKIHGF
        IKIHGF
Subjt:  IKIHGF

P56330 Protein translation factor SUI1 homolog6.8e-4276.85Show/hide
Query:  IPSAFDPFADAKDSD---APGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKK
        IP+AFDPFA+A   D   A G+K YVH+R+QQRNG+K LTTVQGLKKEFSY KILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKK
Subjt:  IPSAFDPFADAKDSD---APGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKK

Query:  DQIKIHGF
        + IKIHGF
Subjt:  DQIKIHGF

Q94JV4 Protein translation factor SUI1 homolog 22.7e-4381.13Show/hide
Query:  IPSAFDPFADAKDSDA-PGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQ
        +P+AFDPFADA   D+  GTK YVHIRVQQRNG+K LTTVQGLKKE+SY KILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD 
Subjt:  IPSAFDPFADAKDSDA-PGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQ

Query:  IKIHGF
        IKIHGF
Subjt:  IKIHGF

Q9SQF4 Protein translation factor SUI1 homolog1.0e-4280.19Show/hide
Query:  IPSAFDPFADAKDSDA-PGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQ
        +P+AFDPFADA   D+  GTK YVHIRVQQRNG+K LTTVQGLKKE+SY KILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD 
Subjt:  IPSAFDPFADAKDSDA-PGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQ

Query:  IKIHGF
        I+IHGF
Subjt:  IKIHGF

Arabidopsis top hitse value%identityAlignment
AT1G54290.1 Translation initiation factor SUI1 family protein2.0e-4481.13Show/hide
Query:  IPSAFDPFADAKDSDA-PGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQ
        +P+AFDPFADA   D+  GTK YVHIRVQQRNG+K LTTVQGLKKE+SY KILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD 
Subjt:  IPSAFDPFADAKDSDA-PGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQ

Query:  IKIHGF
        IKIHGF
Subjt:  IKIHGF

AT4G27130.1 Translation initiation factor SUI1 family protein2.5e-4481.13Show/hide
Query:  IPSAFDPFADAKDSDA-PGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQ
        +P+AFDPFADA   D+  GTK YVHIRVQQRNG+K LTTVQGLKKE+SY KILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD 
Subjt:  IPSAFDPFADAKDSDA-PGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQ

Query:  IKIHGF
        IKIHGF
Subjt:  IKIHGF

AT5G54760.1 Translation initiation factor SUI1 family protein3.3e-4481.13Show/hide
Query:  IPSAFDPFADAKDSDA-PGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQ
        +P+AFDPFADA   D+  GTK YVHIRVQQRNG+K LTTVQGLKKE+SY KILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD 
Subjt:  IPSAFDPFADAKDSDA-PGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQ

Query:  IKIHGF
        IKIHGF
Subjt:  IKIHGF

AT5G54940.1 Translation initiation factor SUI1 family protein2.2e-4884.76Show/hide
Query:  IPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQI
        IPSA+DPFA+AKDSDAPG K  +HIR+QQRNGKK LTTVQGLKKE+SYE+ILKD+KK+FCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQ G+ KKDQI
Subjt:  IPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQI

Query:  KIHGF
        KIHGF
Subjt:  KIHGF

AT5G54940.2 Translation initiation factor SUI1 family protein2.2e-4884.76Show/hide
Query:  IPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQI
        IPSA+DPFA+AKDSDAPG K  +HIR+QQRNGKK LTTVQGLKKE+SYE+ILKD+KK+FCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQ G+ KKDQI
Subjt:  IPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQI

Query:  KIHGF
        KIHGF
Subjt:  KIHGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCATTCCTCTCATCGTTCTTCCTTCCTTGTTCCTTTGATCTCTTTCGCGCGTTCTTGGTCTTTAGCTTTCTGATCCCATCTGCTTTCGATCCATTCGCCGACGC
CAAGGATTCTGATGCCCCCGGAACTAAAGCTTATGTTCATATCCGCGTTCAGCAGAGGAATGGCAAAAAGTGCTTGACTACAGTTCAGGGTCTGAAGAAAGAGTTCAGCT
ACGAGAAGATCCTTAAGGACGTGAAGAAGGAATTCTGCTGTAATGGTAACGTTGTTCAAGACAAAGAATTGGGGAAGATAATCCAACTTCAAGGCGATCAACGCAAAAAC
GTGTCTCAGTTCCTTGTCCAGGCTGGTCTCGTTAAGAAGGATCAGATCAAAATTCATGGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTCATTCCTCTCATCGTTCTTCCTTCCTTGTTCCTTTGATCTCTTTCGCGCGTTCTTGGTCTTTAGCTTTCTGATCCCATCTGCTTTCGATCCATTCGCCGACGC
CAAGGATTCTGATGCCCCCGGAACTAAAGCTTATGTTCATATCCGCGTTCAGCAGAGGAATGGCAAAAAGTGCTTGACTACAGTTCAGGGTCTGAAGAAAGAGTTCAGCT
ACGAGAAGATCCTTAAGGACGTGAAGAAGGAATTCTGCTGTAATGGTAACGTTGTTCAAGACAAAGAATTGGGGAAGATAATCCAACTTCAAGGCGATCAACGCAAAAAC
GTGTCTCAGTTCCTTGTCCAGGCTGGTCTCGTTAAGAAGGATCAGATCAAAATTCATGGGTTTTGA
Protein sequenceShow/hide protein sequence
MFSFLSSFFLPCSFDLFRAFLVFSFLIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKN
VSQFLVQAGLVKKDQIKIHGF