; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg12833 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12833
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCCR4-NOT transcription complex subunit 9-like
Genome locationCarg_Chr09:5397087..5403237
RNA-Seq ExpressionCarg12833
SyntenyCarg12833
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0000932 - P-body (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
InterPro domainsIPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592054.1 CCR4-NOT transcription complex subunit 9, partial [Cucurbita argyrosperma subsp. sororia]6.9e-102100Show/hide
Query:  MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
        MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
Subjt:  MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL

Query:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
        TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
Subjt:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT

KAG6607791.1 CCR4-NOT transcription complex subunit 9, partial [Cucurbita argyrosperma subsp. sororia]1.9e-9695.96Show/hide
Query:  MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
        MSNLPQS SM+AAFGGPG G SIPS+SGA PNKERKMASSEQLVLDLSNP+LRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
Subjt:  MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL

Query:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
        TPAQSNRVCNALALLQCVASH DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
Subjt:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT

KAG7024932.1 CCR4-NOT transcription complex subunit 9 [Cucurbita argyrosperma subsp. argyrosperma]4.0e-110100Show/hide
Query:  MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
        MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
Subjt:  MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL

Query:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTGC
        TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTGC
Subjt:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTGC

Query:  NIYRAENFTG
        NIYRAENFTG
Subjt:  NIYRAENFTG

XP_022936269.1 CCR4-NOT transcription complex subunit 9-like [Cucurbita moschata]1.5e-10199.49Show/hide
Query:  MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
        MSNLPQSHSMNAAFGGPGIGSSIPS+SGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
Subjt:  MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL

Query:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
        TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
Subjt:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT

XP_022976660.1 CCR4-NOT transcription complex subunit 9-like [Cucurbita maxima]1.5e-10199.49Show/hide
Query:  MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
        MSNLPQSHSMNAAFGGPGIGSSIPS+SGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
Subjt:  MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL

Query:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
        TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
Subjt:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT

TrEMBL top hitse value%identityAlignment
A0A6J1CDH6 CCR4-NOT transcription complex subunit 9 isoform X21.5e-9494.95Show/hide
Query:  MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
        MSNLPQS SMNA FGGP  G SIPS+SGA P KERKMA SEQLVLDLSNP+LRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
Subjt:  MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL

Query:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
        TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
Subjt:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT

A0A6J1F7U4 CCR4-NOT transcription complex subunit 9-like7.4e-10299.49Show/hide
Query:  MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
        MSNLPQSHSMNAAFGGPGIGSSIPS+SGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
Subjt:  MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL

Query:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
        TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
Subjt:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT

A0A6J1FRT6 CCR4-NOT transcription complex subunit 9-like9.4e-9795.96Show/hide
Query:  MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
        MSNLPQS SM+AAFGGPG G SIPS+SGA PNKERKMASSEQLVLDLSNP+LRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
Subjt:  MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL

Query:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
        TPAQSNRVCNALALLQCVASH DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
Subjt:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT

A0A6J1IK32 CCR4-NOT transcription complex subunit 9-like7.4e-10299.49Show/hide
Query:  MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
        MSNLPQSHSMNAAFGGPGIGSSIPS+SGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
Subjt:  MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL

Query:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
        TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
Subjt:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT

A0A6J1IU99 CCR4-NOT transcription complex subunit 9-like3.0e-9595Show/hide
Query:  MSNLPQSHSMNAAFG--GPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPP
        MSNLPQS SM+AAFG  GPG G SIPS+SGA PNKERKMASSEQLVLDLSNP+LRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPP
Subjt:  MSNLPQSHSMNAAFG--GPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPP

Query:  NLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
        NLTPAQSNRVCNALALLQCVASH DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
Subjt:  NLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT

SwissProt top hitse value%identityAlignment
A7MB47 CCR4-NOT transcription complex subunit 97.7e-6478.98Show/hide
Query:  QLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFL
        Q + +LS+PE RENALLELSKKRE   DLAP+LW+SFGTIAALLQEIV+IYP ++PP LT  QSNRVCNALALLQCVASHP+TR  FL AHIPL+LYPFL
Subjt:  QLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFL

Query:  NTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
        +T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKT
Subjt:  NTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT

Q4R347 CCR4-NOT transcription complex subunit 97.7e-6478.98Show/hide
Query:  QLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFL
        Q + +LS+PE RENALLELSKKRE   DLAP+LW+SFGTIAALLQEIV+IYP ++PP LT  QSNRVCNALALLQCVASHP+TR  FL AHIPL+LYPFL
Subjt:  QLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFL

Query:  NTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
        +T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKT
Subjt:  NTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT

Q5R6Z6 CCR4-NOT transcription complex subunit 97.7e-6478.98Show/hide
Query:  QLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFL
        Q + +LS+PE RENALLELSKKRE   DLAP+LW+SFGTIAALLQEIV+IYP ++PP LT  QSNRVCNALALLQCVASHP+TR  FL AHIPL+LYPFL
Subjt:  QLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFL

Query:  NTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
        +T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKT
Subjt:  NTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT

Q92600 CCR4-NOT transcription complex subunit 97.7e-6478.98Show/hide
Query:  QLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFL
        Q + +LS+PE RENALLELSKKRE   DLAP+LW+SFGTIAALLQEIV+IYP ++PP LT  QSNRVCNALALLQCVASHP+TR  FL AHIPL+LYPFL
Subjt:  QLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFL

Query:  NTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
        +T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKT
Subjt:  NTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT

Q9JKY0 CCR4-NOT transcription complex subunit 97.7e-6478.98Show/hide
Query:  QLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFL
        Q + +LS+PE RENALLELSKKRE   DLAP+LW+SFGTIAALLQEIV+IYP ++PP LT  QSNRVCNALALLQCVASHP+TR  FL AHIPL+LYPFL
Subjt:  QLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFL

Query:  NTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
        +T SK+RPFEYLRLTSLGVIGALVK D+ EVI+FLL+TEIIPLCLR ME GSELSKT
Subjt:  NTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT

Arabidopsis top hitse value%identityAlignment
AT2G32550.1 Cell differentiation, Rcd1-like protein8.0e-1633.16Show/hide
Query:  SSIPSSSGAAPNKERKMASSE-----QLVLDLSNPE--LRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLS--------PPNLTPAQS
        S+  SSS A P +   +A        Q V D+  P+  + + AL  L+  R  F+ L  LLW S  T+  +LQE+   Y  L+        P  L P   
Subjt:  SSIPSSSGAAPNKERKMASSE-----QLVLDLSNPE--LRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLS--------PPNLTPAQS

Query:  NRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKV-DDTEVISFLLSTEIIPLCLRTMEMGSELSK
         RV N   L Q +A HPDT   FL A +P Y YP ++T    +  E +RL +LGVI  ++K  +D  V  +L+ + ++  C++ +E GS  +K
Subjt:  NRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKV-DDTEVISFLLSTEIIPLCLRTMEMGSELSK

AT3G20800.1 Cell differentiation, Rcd1-like protein1.9e-8986.87Show/hide
Query:  MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
        M+NLP S SM   FGGP   +  P  +GA  NK+R +AS+EQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIY VL+PPNL
Subjt:  MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL

Query:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
        TPAQSNRVCN+LALLQCVASH DTRMLFL AHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
Subjt:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT

AT5G12980.1 Cell differentiation, Rcd1-like protein5.6e-7877.27Show/hide
Query:  MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL
        M+NLP   SM +       G+S PSSS    N +RK++S+EQL+LDLSNPELRENAL ELSKKRE+FQDLAPLLW+S GTI ALLQEI+++YP LSPP +
Subjt:  MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNL

Query:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT
        TPAQSNRVCNALALLQCVASH DTRMLFL AH+PLYLY FLNT+SKSRPFEYLRLTSLGVIGALVKVDDTEVI FLL TEI+PLCLRTME GSELSKT
Subjt:  TPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAATCTTCCCCAATCGCACTCCATGAATGCTGCGTTTGGAGGTCCTGGTATCGGTTCGTCGATCCCCAGTTCCTCAGGAGCTGCACCGAACAAGGAGCGAAAAAT
GGCTTCTTCGGAGCAACTAGTGCTCGACCTCAGCAACCCGGAACTCCGGGAGAACGCTCTCCTTGAACTGTCGAAGAAGAGGGAACTGTTTCAAGATTTGGCTCCACTGT
TATGGAACTCCTTTGGAACCATTGCTGCCTTGTTGCAAGAAATTGTATCAATATATCCTGTTCTGTCTCCCCCTAATCTGACCCCGGCGCAGTCGAATAGAGTTTGCAAT
GCTCTTGCTCTTCTTCAGTGTGTAGCTTCACACCCAGATACAAGGATGTTGTTTCTCAACGCTCACATACCGTTGTATTTGTATCCTTTCCTCAACACGACTAGCAAGTC
GAGGCCTTTTGAGTACTTGCGCCTTACTAGCTTGGGTGTCATCGGTGCATTGGTGAAGGTAGATGATACAGAAGTAATAAGTTTTCTGCTGTCAACTGAAATAATTCCTC
TATGCCTGCGTACAATGGAAATGGGAAGCGAGTTGTCAAAAACAGGTTGCAACATTTATCGTGCAGAAAATTTTACTGGATGA
mRNA sequenceShow/hide mRNA sequence
AAATAATATTAAAGATTTATATGCATATATATATATGTGTGTGTGTACACTCCATCTAGGCCTAGAAATCGACGCCCTCTCCGCTGCTAAAGAGAGGAACTTCCTTCGCC
GGCGTGAAATCGGAGGAGTCTTGTTGAGACTTGAAGGTTTTTGATCGTCGAAAATGTCGAATCTTCCCCAATCGCACTCCATGAATGCTGCGTTTGGAGGTCCTGGTATC
GGTTCGTCGATCCCCAGTTCCTCAGGAGCTGCACCGAACAAGGAGCGAAAAATGGCTTCTTCGGAGCAACTAGTGCTCGACCTCAGCAACCCGGAACTCCGGGAGAACGC
TCTCCTTGAACTGTCGAAGAAGAGGGAACTGTTTCAAGATTTGGCTCCACTGTTATGGAACTCCTTTGGAACCATTGCTGCCTTGTTGCAAGAAATTGTATCAATATATC
CTGTTCTGTCTCCCCCTAATCTGACCCCGGCGCAGTCGAATAGAGTTTGCAATGCTCTTGCTCTTCTTCAGTGTGTAGCTTCACACCCAGATACAAGGATGTTGTTTCTC
AACGCTCACATACCGTTGTATTTGTATCCTTTCCTCAACACGACTAGCAAGTCGAGGCCTTTTGAGTACTTGCGCCTTACTAGCTTGGGTGTCATCGGTGCATTGGTGAA
GGTAGATGATACAGAAGTAATAAGTTTTCTGCTGTCAACTGAAATAATTCCTCTATGCCTGCGTACAATGGAAATGGGAAGCGAGTTGTCAAAAACAGGTTGCAACATTT
ATCGTGCAGAAAATTTTACTGGATGATGTCGGGTTGGATTATATTTGTACTACAGCCGAAAGATTTTTCGCTGTTGGTCGAGTTCTGGGGAATATGGTTGCAGCTCTCGC
TGAGCAACCTTCATCTCGTCTCTTGAAGCACATAATTCGATGTTATCTTCGATTGTCCGATAACCCGAAAGCTTGCGACGCCTTAAGGAGCTGTCTTCCAGACATGCTGA
GAGATTCTACTTTCAATGGCTGTCTTCGGGATGATCCAACCACTAGGAGGTGGCTGCAACAGTTGCTTATCAGTGTAGGGATGAGTAGGGTTCCTACACTTCAGGCAGGG
GCTGGATTTGATCACATGATGTGAACTAAACCCGTAATGT
Protein sequenceShow/hide protein sequence
MSNLPQSHSMNAAFGGPGIGSSIPSSSGAAPNKERKMASSEQLVLDLSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCN
ALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTGCNIYRAENFTG