; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg12841 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12841
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionlipid-binding serum glycoprotein family protein
Genome locationCarg_Chr09:5449337..5449834
RNA-Seq ExpressionCarg12841
SyntenyCarg12841
Gene Ontology termsGO:0005615 - extracellular space (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR017942 - Lipid-binding serum glycoprotein, N-terminal
IPR017943 - Bactericidal permeability-increasing protein, alpha/beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592062.1 putative BPI/LBP family protein, partial [Cucurbita argyrosperma subsp. sororia]1.5e-48100Show/hide
Query:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD
        MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD
Subjt:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD

Query:  ASVQV
        ASVQV
Subjt:  ASVQV

KAG7024940.1 putative BPI/LBP family protein, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-85100Show/hide
Query:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD
        MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD
Subjt:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD

Query:  ASVQVIQLLCNAICFIDAEKYEHSRMHVLPSDLDVFEILKPHIETFVCYDLCGLLELALRTLLDL
        ASVQVIQLLCNAICFIDAEKYEHSRMHVLPSDLDVFEILKPHIETFVCYDLCGLLELALRTLLDL
Subjt:  ASVQVIQLLCNAICFIDAEKYEHSRMHVLPSDLDVFEILKPHIETFVCYDLCGLLELALRTLLDL

XP_022936260.1 putative BPI/LBP family protein At1g04970 isoform X1 [Cucurbita moschata]2.9e-4797.14Show/hide
Query:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD
        MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIA IGKVHIVLSDIIIG+VEVESSHIRIGDTGVNIV AKATANMSMKWQYTYNTWLFEISDEGD
Subjt:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD

Query:  ASVQV
        ASVQV
Subjt:  ASVQV

XP_022936262.1 putative BPI/LBP family protein At1g04970 isoform X3 [Cucurbita moschata]2.9e-4797.14Show/hide
Query:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD
        MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIA IGKVHIVLSDIIIG+VEVESSHIRIGDTGVNIV AKATANMSMKWQYTYNTWLFEISDEGD
Subjt:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD

Query:  ASVQV
        ASVQV
Subjt:  ASVQV

XP_023535011.1 putative BPI/LBP family protein At1g04970 [Cucurbita pepo subsp. pepo]5.0e-4797.14Show/hide
Query:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD
        MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVE+SHIRIGDTGVNIV AKATAN SMKWQYTYNTWLFEISDEGD
Subjt:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD

Query:  ASVQV
        ASVQV
Subjt:  ASVQV

TrEMBL top hitse value%identityAlignment
A0A5A7TX84 Putative BPI/LBP family protein1.2e-4184.76Show/hide
Query:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD
        M++SQKGLNFIKDFLI+KAVS IIPL LPD+EKTVNI LIGKVH+VLS+IIIGS EVESS IRIG+TGVNI+  KATANMSMKW+YTYNTWLFEISDEGD
Subjt:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD

Query:  ASVQV
        ASVQV
Subjt:  ASVQV

A0A6J1F708 putative BPI/LBP family protein At1g04970 isoform X11.4e-4797.14Show/hide
Query:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD
        MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIA IGKVHIVLSDIIIG+VEVESSHIRIGDTGVNIV AKATANMSMKWQYTYNTWLFEISDEGD
Subjt:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD

Query:  ASVQV
        ASVQV
Subjt:  ASVQV

A0A6J1F7Y6 putative BPI/LBP family protein At1g04970 isoform X31.4e-4797.14Show/hide
Query:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD
        MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIA IGKVHIVLSDIIIG+VEVESSHIRIGDTGVNIV AKATANMSMKWQYTYNTWLFEISDEGD
Subjt:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD

Query:  ASVQV
        ASVQV
Subjt:  ASVQV

A0A6J1IZJ3 putative BPI/LBP family protein At1g04970 isoform X21.4e-4286.67Show/hide
Query:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD
        M++SQKGLNFIKDFLIDKA+S+IIPLRLP+IEKT NIALIGKVH+ LSDIIIGS+EVESS IRIG+TGVNIV  KATANMSMKWQYTYNTWLFEISD+GD
Subjt:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD

Query:  ASVQV
        ASVQV
Subjt:  ASVQV

A0A6J1J1W5 putative BPI/LBP family protein At1g04970 isoform X11.4e-4286.67Show/hide
Query:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD
        M++SQKGLNFIKDFLIDKA+S+IIPLRLP+IEKT NIALIGKVH+ LSDIIIGS+EVESS IRIG+TGVNIV  KATANMSMKWQYTYNTWLFEISD+GD
Subjt:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD

Query:  ASVQV
        ASVQV
Subjt:  ASVQV

SwissProt top hitse value%identityAlignment
Q8VYC2 Putative BPI/LBP family protein At3g202705.7e-2251.43Show/hide
Query:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD
        +++S+ GL F KD+LI K ++T +PL+LPDIE  V I LIGKV + LS+I I +V V+SS +     G+ +    ATAN+SM W YTY    FEISD GD
Subjt:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD

Query:  ASVQV
        ASV+V
Subjt:  ASVQV

Q9MAU5 Putative BPI/LBP family protein At1g049702.1e-2449.53Show/hide
Query:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWL--FEISDE
        +L+SQ GL+F+K+ L++KA+++IIPL++P IEK++ I  +G + +V+S++ I  ++V SS++++G+TGV IVA+  T N+SM W Y+Y+TWL   EISD+
Subjt:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWL--FEISDE

Query:  GDASVQV
        G ASVQV
Subjt:  GDASVQV

Arabidopsis top hitse value%identityAlignment
AT1G04970.1 lipid-binding serum glycoprotein family protein1.5e-2549.53Show/hide
Query:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWL--FEISDE
        +L+SQ GL+F+K+ L++KA+++IIPL++P IEK++ I  +G + +V+S++ I  ++V SS++++G+TGV IVA+  T N+SM W Y+Y+TWL   EISD+
Subjt:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWL--FEISDE

Query:  GDASVQV
        G ASVQV
Subjt:  GDASVQV

AT3G20270.1 lipid-binding serum glycoprotein family protein4.1e-2351.43Show/hide
Query:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD
        +++S+ GL F KD+LI K ++T +PL+LPDIE  V I LIGKV + LS+I I +V V+SS +     G+ +    ATAN+SM W YTY    FEISD GD
Subjt:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD

Query:  ASVQV
        ASV+V
Subjt:  ASVQV

AT3G20270.2 lipid-binding serum glycoprotein family protein4.1e-2351.43Show/hide
Query:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD
        +++S+ GL F KD+LI K ++T +PL+LPDIE  V I LIGKV + LS+I I +V V+SS +     G+ +    ATAN+SM W YTY    FEISD GD
Subjt:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD

Query:  ASVQV
        ASV+V
Subjt:  ASVQV

AT3G20270.3 lipid-binding serum glycoprotein family protein4.1e-2351.43Show/hide
Query:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD
        +++S+ GL F KD+LI K ++T +PL+LPDIE  V I LIGKV + LS+I I +V V+SS +     G+ +    ATAN+SM W YTY    FEISD GD
Subjt:  MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGD

Query:  ASVQV
        ASV+V
Subjt:  ASVQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCATATCCCAAAAGGGTCTCAACTTCATCAAGGATTTCTTGATCGACAAGGCAGTTTCCACCATCATTCCACTTCGTTTGCCCGATATTGAGAAGACTGTCAATAT
CGCTCTTATTGGCAAAGTTCATATCGTTCTTTCCGACATAATCATCGGCAGCGTCGAGGTCGAATCCTCGCATATTCGGATCGGCGACACGGGTGTCAATATAGTTGCTG
CAAAGGCCACTGCTAATATGAGTATGAAATGGCAGTATACCTACAACACTTGGCTGTTTGAAATTTCTGATGAAGGAGACGCCTCTGTTCAGGTAATTCAGCTACTCTGT
AACGCTATTTGCTTTATTGATGCTGAAAAGTATGAACATAGCCGGATGCATGTGTTACCAAGTGATTTGGATGTTTTTGAGATACTTAAGCCTCATATAGAAACTTTTGT
GTGTTATGATCTTTGTGGTCTTTTGGAGCTGGCTTTGCGCACCCTTTTGGATTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCATATCCCAAAAGGGTCTCAACTTCATCAAGGATTTCTTGATCGACAAGGCAGTTTCCACCATCATTCCACTTCGTTTGCCCGATATTGAGAAGACTGTCAATAT
CGCTCTTATTGGCAAAGTTCATATCGTTCTTTCCGACATAATCATCGGCAGCGTCGAGGTCGAATCCTCGCATATTCGGATCGGCGACACGGGTGTCAATATAGTTGCTG
CAAAGGCCACTGCTAATATGAGTATGAAATGGCAGTATACCTACAACACTTGGCTGTTTGAAATTTCTGATGAAGGAGACGCCTCTGTTCAGGTAATTCAGCTACTCTGT
AACGCTATTTGCTTTATTGATGCTGAAAAGTATGAACATAGCCGGATGCATGTGTTACCAAGTGATTTGGATGTTTTTGAGATACTTAAGCCTCATATAGAAACTTTTGT
GTGTTATGATCTTTGTGGTCTTTTGGAGCTGGCTTTGCGCACCCTTTTGGATTTGTAG
Protein sequenceShow/hide protein sequence
MLISQKGLNFIKDFLIDKAVSTIIPLRLPDIEKTVNIALIGKVHIVLSDIIIGSVEVESSHIRIGDTGVNIVAAKATANMSMKWQYTYNTWLFEISDEGDASVQVIQLLC
NAICFIDAEKYEHSRMHVLPSDLDVFEILKPHIETFVCYDLCGLLELALRTLLDL