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Carg12843 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12843
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionsyntaxin-51-like
Genome locationCarg_Chr09:5458639..5462156
RNA-Seq ExpressionCarg12843
SyntenyCarg12843
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006906 - vesicle fusion (biological process)
GO:0048278 - vesicle docking (biological process)
GO:0012505 - endomembrane system (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031201 - SNARE complex (cellular component)
GO:0000149 - SNARE binding (molecular function)
GO:0005484 - SNAP receptor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048124.1 syntaxin-51-like [Cucumis melo var. makuwa]4.7e-6290.34Show/hide
Query:  MAYTLESWAKEYNEAMKLSEDINGMISGRSS--ASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLN
        MAYTLESW KEYNEA+KLSEDINGMIS RSS  ASGPEAQRHASAIRRKITILGTRLDTLQ+QLPKLQGKQPIPEKEMNRRRDMI NLRSKA QMAS LN
Subjt:  MAYTLESWAKEYNEAMKLSEDINGMISGRSS--ASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLN

Query:  MSNFANRDSLLGPEIKPAE--NRTEGLDNRGLLGFQRQVMRGRFI
        MSNFANRDSLLGPEIKPA+  NRTEGLDNRGL+GFQRQ+MRGRFI
Subjt:  MSNFANRDSLLGPEIKPAE--NRTEGLDNRGLLGFQRQVMRGRFI

KAG7024942.1 Syntaxin-51 [Cucurbita argyrosperma subsp. argyrosperma]7.9e-70100Show/hide
Query:  MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMS
        MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMS
Subjt:  MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMS

Query:  NFANRDSLLGPEIKPAENRTEGLDNRGLLGFQRQVMRGRFI
        NFANRDSLLGPEIKPAENRTEGLDNRGLLGFQRQVMRGRFI
Subjt:  NFANRDSLLGPEIKPAENRTEGLDNRGLLGFQRQVMRGRFI

XP_022936274.1 syntaxin-51-like [Cucurbita moschata]2.2e-67100Show/hide
Query:  MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMS
        MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMS
Subjt:  MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMS

Query:  NFANRDSLLGPEIKPAENRTEGLDNRGLLGFQRQVMR
        NFANRDSLLGPEIKPAENRTEGLDNRGLLGFQRQVMR
Subjt:  NFANRDSLLGPEIKPAENRTEGLDNRGLLGFQRQVMR

XP_022976367.1 syntaxin-51-like [Cucurbita maxima]6.3e-6799.27Show/hide
Query:  MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMS
        MAYTLESW KEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMS
Subjt:  MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMS

Query:  NFANRDSLLGPEIKPAENRTEGLDNRGLLGFQRQVMR
        NFANRDSLLGPEIKPAENRTEGLDNRGLLGFQRQVMR
Subjt:  NFANRDSLLGPEIKPAENRTEGLDNRGLLGFQRQVMR

XP_023535353.1 syntaxin-51-like [Cucurbita pepo subsp. pepo]2.2e-67100Show/hide
Query:  MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMS
        MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMS
Subjt:  MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMS

Query:  NFANRDSLLGPEIKPAENRTEGLDNRGLLGFQRQVMR
        NFANRDSLLGPEIKPAENRTEGLDNRGLLGFQRQVMR
Subjt:  NFANRDSLLGPEIKPAENRTEGLDNRGLLGFQRQVMR

TrEMBL top hitse value%identityAlignment
A0A0A0K2Y5 t-SNARE coiled-coil homology domain-containing protein1.6e-6090.78Show/hide
Query:  MAYTLESWAKEYNEAMKLSEDINGMISGRSS--ASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLN
        MAYTLESW KEYNEA+KLSEDINGMIS RSS  ASGPEAQRHASAIRRKITILGTRLDTLQ+QLPKLQGKQPIPEKEMNRRRDMI NLRSKA QMASTLN
Subjt:  MAYTLESWAKEYNEAMKLSEDINGMISGRSS--ASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLN

Query:  MSNFANRDSLLGPEIKPAE--NRTEGLDNRGLLGFQRQVMR
        MSNFANRDSLLGPEIKPA+  NRTEGLDNRGL+GFQRQ+MR
Subjt:  MSNFANRDSLLGPEIKPAE--NRTEGLDNRGLLGFQRQVMR

A0A5A7TYL4 Syntaxin-51-like2.3e-6290.34Show/hide
Query:  MAYTLESWAKEYNEAMKLSEDINGMISGRSS--ASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLN
        MAYTLESW KEYNEA+KLSEDINGMIS RSS  ASGPEAQRHASAIRRKITILGTRLDTLQ+QLPKLQGKQPIPEKEMNRRRDMI NLRSKA QMAS LN
Subjt:  MAYTLESWAKEYNEAMKLSEDINGMISGRSS--ASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLN

Query:  MSNFANRDSLLGPEIKPAE--NRTEGLDNRGLLGFQRQVMRGRFI
        MSNFANRDSLLGPEIKPA+  NRTEGLDNRGL+GFQRQ+MRGRFI
Subjt:  MSNFANRDSLLGPEIKPAE--NRTEGLDNRGLLGFQRQVMRGRFI

A0A5D3DIH2 Syntaxin-51-like6.2e-6090.07Show/hide
Query:  MAYTLESWAKEYNEAMKLSEDINGMISGRSS--ASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLN
        MAYTLESW KEYNEA+KLSEDINGMIS RSS  ASGPEAQRHASAIRRKITILGTRLDTLQ+QLPKLQGKQPIPEKEMNRRRDMI NLRSKA QMAS LN
Subjt:  MAYTLESWAKEYNEAMKLSEDINGMISGRSS--ASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLN

Query:  MSNFANRDSLLGPEIKPAE--NRTEGLDNRGLLGFQRQVMR
        MSNFANRDSLLGPEIKPA+  NRTEGLDNRGL+GFQRQ+MR
Subjt:  MSNFANRDSLLGPEIKPAE--NRTEGLDNRGLLGFQRQVMR

A0A6J1F7U9 syntaxin-51-like1.0e-67100Show/hide
Query:  MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMS
        MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMS
Subjt:  MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMS

Query:  NFANRDSLLGPEIKPAENRTEGLDNRGLLGFQRQVMR
        NFANRDSLLGPEIKPAENRTEGLDNRGLLGFQRQVMR
Subjt:  NFANRDSLLGPEIKPAENRTEGLDNRGLLGFQRQVMR

A0A6J1IFJ4 syntaxin-51-like3.0e-6799.27Show/hide
Query:  MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMS
        MAYTLESW KEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMS
Subjt:  MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMS

Query:  NFANRDSLLGPEIKPAENRTEGLDNRGLLGFQRQVMR
        NFANRDSLLGPEIKPAENRTEGLDNRGLLGFQRQVMR
Subjt:  NFANRDSLLGPEIKPAENRTEGLDNRGLLGFQRQVMR

SwissProt top hitse value%identityAlignment
Q94KK7 Syntaxin-523.5e-4467.38Show/hide
Query:  MAYTLESWAKEYNEAMKLSEDINGMISGR--SSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLN
        MA + + W +EYNEA+KLSEDINGM+S R  S  +GP+AQR ASAIRRKITILGTRLD+LQ+ L K+ GKQ + EKEMNRR+DM+ NLRSK NQ+AS LN
Subjt:  MAYTLESWAKEYNEAMKLSEDINGMISGR--SSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLN

Query:  MSNFANRDSLLGPEIKP--AENRTEGLDNRGLLGFQRQVMR
        MSNFANRDSL G ++KP  A NR  G+DN+G++ FQRQVMR
Subjt:  MSNFANRDSLLGPEIKP--AENRTEGLDNRGLLGFQRQVMR

Q9SA23 Syntaxin-512.0e-4467.38Show/hide
Query:  MAYTLESWAKEYNEAMKLSEDINGMISGRSSA--SGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLN
        MA + +SW + YNEA+KLSE+INGMIS RSS+  +GP+AQR ASAIRRKITI G +LD+LQ+ L ++ GK PI EKEMNRR+DM+ NLRSKANQMA+ LN
Subjt:  MAYTLESWAKEYNEAMKLSEDINGMISGRSSA--SGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLN

Query:  MSNFANRDSLLGPEIKPAE--NRTEGLDNRGLLGFQRQVMR
        MSNFANRDSLLGP+IKP +  +R  G+DN+G++G+QRQVMR
Subjt:  MSNFANRDSLLGPEIKPAE--NRTEGLDNRGLLGFQRQVMR

Arabidopsis top hitse value%identityAlignment
AT1G16240.1 syntaxin of plants 511.5e-4567.38Show/hide
Query:  MAYTLESWAKEYNEAMKLSEDINGMISGRSSA--SGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLN
        MA + +SW + YNEA+KLSE+INGMIS RSS+  +GP+AQR ASAIRRKITI G +LD+LQ+ L ++ GK PI EKEMNRR+DM+ NLRSKANQMA+ LN
Subjt:  MAYTLESWAKEYNEAMKLSEDINGMISGRSSA--SGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLN

Query:  MSNFANRDSLLGPEIKPAE--NRTEGLDNRGLLGFQRQVMR
        MSNFANRDSLLGP+IKP +  +R  G+DN+G++G+QRQVMR
Subjt:  MSNFANRDSLLGPEIKPAE--NRTEGLDNRGLLGFQRQVMR

AT1G16240.2 syntaxin of plants 511.5e-4567.38Show/hide
Query:  MAYTLESWAKEYNEAMKLSEDINGMISGRSSA--SGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLN
        MA + +SW + YNEA+KLSE+INGMIS RSS+  +GP+AQR ASAIRRKITI G +LD+LQ+ L ++ GK PI EKEMNRR+DM+ NLRSKANQMA+ LN
Subjt:  MAYTLESWAKEYNEAMKLSEDINGMISGRSSA--SGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLN

Query:  MSNFANRDSLLGPEIKPAE--NRTEGLDNRGLLGFQRQVMR
        MSNFANRDSLLGP+IKP +  +R  G+DN+G++G+QRQVMR
Subjt:  MSNFANRDSLLGPEIKPAE--NRTEGLDNRGLLGFQRQVMR

AT1G16240.3 syntaxin of plants 511.5e-4567.38Show/hide
Query:  MAYTLESWAKEYNEAMKLSEDINGMISGRSSA--SGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLN
        MA + +SW + YNEA+KLSE+INGMIS RSS+  +GP+AQR ASAIRRKITI G +LD+LQ+ L ++ GK PI EKEMNRR+DM+ NLRSKANQMA+ LN
Subjt:  MAYTLESWAKEYNEAMKLSEDINGMISGRSSA--SGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLN

Query:  MSNFANRDSLLGPEIKPAE--NRTEGLDNRGLLGFQRQVMR
        MSNFANRDSLLGP+IKP +  +R  G+DN+G++G+QRQVMR
Subjt:  MSNFANRDSLLGPEIKPAE--NRTEGLDNRGLLGFQRQVMR

AT1G79590.1 syntaxin of plants 522.5e-4567.38Show/hide
Query:  MAYTLESWAKEYNEAMKLSEDINGMISGR--SSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLN
        MA + + W +EYNEA+KLSEDINGM+S R  S  +GP+AQR ASAIRRKITILGTRLD+LQ+ L K+ GKQ + EKEMNRR+DM+ NLRSK NQ+AS LN
Subjt:  MAYTLESWAKEYNEAMKLSEDINGMISGR--SSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLN

Query:  MSNFANRDSLLGPEIKP--AENRTEGLDNRGLLGFQRQVMR
        MSNFANRDSL G ++KP  A NR  G+DN+G++ FQRQVMR
Subjt:  MSNFANRDSLLGPEIKP--AENRTEGLDNRGLLGFQRQVMR

AT1G79590.2 syntaxin of plants 522.5e-4567.38Show/hide
Query:  MAYTLESWAKEYNEAMKLSEDINGMISGR--SSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLN
        MA + + W +EYNEA+KLSEDINGM+S R  S  +GP+AQR ASAIRRKITILGTRLD+LQ+ L K+ GKQ + EKEMNRR+DM+ NLRSK NQ+AS LN
Subjt:  MAYTLESWAKEYNEAMKLSEDINGMISGR--SSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLN

Query:  MSNFANRDSLLGPEIKP--AENRTEGLDNRGLLGFQRQVMR
        MSNFANRDSL G ++KP  A NR  G+DN+G++ FQRQVMR
Subjt:  MSNFANRDSLLGPEIKP--AENRTEGLDNRGLLGFQRQVMR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTATACTTTGGAATCATGGGCGAAGGAATACAATGAAGCCATGAAACTCTCTGAAGATATCAATGGCATGATTTCTGGGAGAAGTTCTGCTTCTGGACCAGAAGC
TCAGCGTCATGCCTCAGCTATACGCAGGAAGATCACAATATTGGGTACCAGACTTGATACCTTGCAGACTCAGTTACCCAAGCTTCAAGGAAAGCAACCAATACCGGAGA
AAGAGATGAATCGACGCAGGGATATGATAGCGAATTTGAGATCGAAAGCTAACCAGATGGCTTCAACTTTGAACATGTCTAACTTTGCTAACCGAGATAGCTTACTTGGT
CCAGAAATAAAGCCAGCAGAGAATAGGACGGAAGGCTTAGACAACCGAGGCCTACTCGGTTTTCAACGACAAGTTATGAGAGGCAGGTTTATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAGGTTTGTGCTATTACAAATGGTATCAGAGTCAAAGATACTAAAAAAAAATGGGTATCATAATTGTTGTTAGAACGATTATACGATTACAGGTACATATGAGACC
CACAGCAGTGTCCAATAATCTCGAGGAACGCTTTTCTTTCTTTATATTTTTTCATTTTCTTCTTGATTTTCTCCCTTCAGGAATTTTCAAACCAATTTGCGCAGATCCAA
ATTCCGACGTTCTGATTCCTGATTCCAATTGATCGACGAATGTTGGTCGCCGGCGGTGGCGGATTTGTACCATCCTTCATAGCTATTCTATAAATTCCCCAGCCGATCTG
CCATTGCCGCCGGTTGAATTCTCATTTTTCGATCGTCAATTCTGATTTCCAAACGGCCAATGGCGTATACTTTGGAATCATGGGCGAAGGAATACAATGAAGCCATGAAA
CTCTCTGAAGATATCAATGGCATGATTTCTGGGAGAAGTTCTGCTTCTGGACCAGAAGCTCAGCGTCATGCCTCAGCTATACGCAGGAAGATCACAATATTGGGTACCAG
ACTTGATACCTTGCAGACTCAGTTACCCAAGCTTCAAGGAAAGCAACCAATACCGGAGAAAGAGATGAATCGACGCAGGGATATGATAGCGAATTTGAGATCGAAAGCTA
ACCAGATGGCTTCAACTTTGAACATGTCTAACTTTGCTAACCGAGATAGCTTACTTGGTCCAGAAATAAAGCCAGCAGAGAATAGGACGGAAGGCTTAGACAACCGAGGC
CTACTCGGTTTTCAACGACAAGTTATGAGAGGCAGGTTTATTTAGCAAGATGAAGGCCTCGAGAAACTGGAAGGGACTATAATGAGCACAAAACATATTGCATTGGCTGT
CAATGAAGAACTTAGCCTTCACACGAGACTTATCGATGATTTGGATGAACATGTCGATGTTACAGATTCCCGATTACGGAGAGTGCAGAAGAGGCTGGCAATAATGAACA
AGCGGACCAAGGGTGGATGCACTTGCATGTCAATGATTTCATCAATTGTTGGAATTGTCGTTCTCATCACTCTCATATGGCTACTCATCAAGTATTTGTAAATTCACTGT
CTTGGTATGAATTTACTAGAACATAAACTTTTGGTGTAAGATTCTGATATCTGTTGATTTTCTTAGTGAATTTGTGTGTTTTTTTCTTCATCTTTCACTTGGATTCCATG
AGATTTAGGAGATTTTGGGCTTACCAACTCTTCACCCT
Protein sequenceShow/hide protein sequence
MAYTLESWAKEYNEAMKLSEDINGMISGRSSASGPEAQRHASAIRRKITILGTRLDTLQTQLPKLQGKQPIPEKEMNRRRDMIANLRSKANQMASTLNMSNFANRDSLLG
PEIKPAENRTEGLDNRGLLGFQRQVMRGRFI