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Carg12854 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12854
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionATMRP3
Genome locationCarg_Chr09:5561047..5563585
RNA-Seq ExpressionCarg12854
SyntenyCarg12854
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024953.1 hypothetical protein SDJN02_13773, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-79100Show/hide
Query:  MKVKLWMDKLHGLVNYMCIKTNLDLEARPCHCQGLSLKIEPGSMTPTGIDTKKIKDEANVIEDNKSRRKQSHSIAAAVWNLGREFQVTSSRASMNINSLT
        MKVKLWMDKLHGLVNYMCIKTNLDLEARPCHCQGLSLKIEPGSMTPTGIDTKKIKDEANVIEDNKSRRKQSHSIAAAVWNLGREFQVTSSRASMNINSLT
Subjt:  MKVKLWMDKLHGLVNYMCIKTNLDLEARPCHCQGLSLKIEPGSMTPTGIDTKKIKDEANVIEDNKSRRKQSHSIAAAVWNLGREFQVTSSRASMNINSLT

Query:  LLRILPLGVESKNDMGARKMLVCILTKSSVAALKPAVTRRADLKKTYKELPMAKAT
        LLRILPLGVESKNDMGARKMLVCILTKSSVAALKPAVTRRADLKKTYKELPMAKAT
Subjt:  LLRILPLGVESKNDMGARKMLVCILTKSSVAALKPAVTRRADLKKTYKELPMAKAT
TrEMBL top hitse value%identityAlignment
A0A0A9G679 Uncharacterized protein2.4e-0456.86Show/hide
Query:  PLGVESKNDMGARKMLVCILTKSSVAALKPAVTRRADLKKTYKELPMAKAT
        PLGVESK D+GA  M +CIL  + VA L  AVTR + L +T+ ELP A AT
Subjt:  PLGVESKNDMGARKMLVCILTKSSVAALKPAVTRRADLKKTYKELPMAKAT
A0A0A9ITV8 ATMRP34.1e-0456.86Show/hide
Query:  PLGVESKNDMGARKMLVCILTKSSVAALKPAVTRRADLKKTYKELPMAKAT
        PLGVESK D+GA  M +CIL  + VA L  AVTR + L +T+ ELP A AT
Subjt:  PLGVESKNDMGARKMLVCILTKSSVAALKPAVTRRADLKKTYKELPMAKAT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGTCAAGTTATGGATGGACAAGTTACATGGTTTGGTGAACTATATGTGTATCAAGACGAACCTTGACTTAGAAGCAAGACCATGTCACTGTCAAGGACTGAGCTT
GAAAATTGAACCTGGATCAATGACTCCCACAGGGATAGATACCAAGAAAATCAAAGACGAGGCGAATGTGATCGAAGACAATAAATCGAGACGGAAGCAGAGCCATTCCA
TTGCTGCAGCTGTGTGGAACTTGGGTCGAGAGTTTCAAGTGACTAGTTCAAGAGCATCCATGAATATAAATTCACTCACTCTATTGAGGATTCTTCCACTCGGAGTAGAA
TCGAAGAACGACATGGGAGCCCGAAAGATGCTCGTGTGCATTTTAACGAAGAGTTCAGTTGCTGCTTTAAAACCAGCCGTCACAAGAAGGGCTGATCTCAAGAAGACATA
CAAAGAGCTTCCAATGGCCAAAGCAACATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGTCAAGTTATGGATGGACAAGTTACATGGTTTGGTGAACTATATGTGTATCAAGACGAACCTTGACTTAGAAGCAAGACCATGTCACTGTCAAGGACTGAGCTT
GAAAATTGAACCTGGATCAATGACTCCCACAGGGATAGATACCAAGAAAATCAAAGACGAGGCGAATGTGATCGAAGACAATAAATCGAGACGGAAGCAGAGCCATTCCA
TTGCTGCAGCTGTGTGGAACTTGGGTCGAGAGTTTCAAGTGACTAGTTCAAGAGCATCCATGAATATAAATTCACTCACTCTATTGAGGATTCTTCCACTCGGAGTAGAA
TCGAAGAACGACATGGGAGCCCGAAAGATGCTCGTGTGCATTTTAACGAAGAGTTCAGTTGCTGCTTTAAAACCAGCCGTCACAAGAAGGGCTGATCTCAAGAAGACATA
CAAAGAGCTTCCAATGGCCAAAGCAACATAG
Protein sequenceShow/hide protein sequence
MKVKLWMDKLHGLVNYMCIKTNLDLEARPCHCQGLSLKIEPGSMTPTGIDTKKIKDEANVIEDNKSRRKQSHSIAAAVWNLGREFQVTSSRASMNINSLTLLRILPLGVE
SKNDMGARKMLVCILTKSSVAALKPAVTRRADLKKTYKELPMAKAT