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Carg12857 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12857
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr09:5577806..5579070
RNA-Seq ExpressionCarg12857
SyntenyCarg12857
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645980.1 hypothetical protein Csa_015455 [Cucumis sativus]1.5e-1292.86Show/hide
Query:  GKKQVPRWKGQVELARSKAEFWLLDVKKAEASKERDGLRGRN
        GKKQVPRWKGQVE+ARSKAEFWLLDVKKAE SKER+GLRGRN
Subjt:  GKKQVPRWKGQVELARSKAEFWLLDVKKAEASKERDGLRGRN

KAG6592080.1 DUF21 domain-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.6e-4181.98Show/hide
Query:  YEEPCSDELGGRTSSEWKNNPVCSEHTAELACIDSDDSLRNSFCCLNSLAFCNRLNLSCSKAMEEFIALALQFSLLILKEKGGKKKP------ISYTSCF
        YEEPCSDELGGRTSSEWKNNPVCSEHTAELACIDSDDSLRNSFCCLNSLAFCNRLNLSCSKAMEEFIALALQFSLLILKEKGGKKK           SCF
Subjt:  YEEPCSDELGGRTSSEWKNNPVCSEHTAELACIDSDDSLRNSFCCLNSLAFCNRLNLSCSKAMEEFIALALQFSLLILKEKGGKKKP------ISYTSCF

Query:  LRASPKSLSGK
             +   GK
Subjt:  LRASPKSLSGK

KAG7024956.1 hypothetical protein SDJN02_13776, partial [Cucurbita argyrosperma subsp. argyrosperma]7.9e-102100Show/hide
Query:  MTVSLDPMYEEPCSDELGGRTSSEWKNNPVCSEHTAELACIDSDDSLRNSFCCLNSLAFCNRLNLSCSKAMEEFIALALQFSLLILKEKGGKKKPISYTS
        MTVSLDPMYEEPCSDELGGRTSSEWKNNPVCSEHTAELACIDSDDSLRNSFCCLNSLAFCNRLNLSCSKAMEEFIALALQFSLLILKEKGGKKKPISYTS
Subjt:  MTVSLDPMYEEPCSDELGGRTSSEWKNNPVCSEHTAELACIDSDDSLRNSFCCLNSLAFCNRLNLSCSKAMEEFIALALQFSLLILKEKGGKKKPISYTS

Query:  CFLRASPKSLSGKKQVPRWKGQVELARSKAEFWLLDVKKAEASKERDGLRGRNNSTCAIHNGDFSLKQKNPTIMDEYHSHMAYYSR
        CFLRASPKSLSGKKQVPRWKGQVELARSKAEFWLLDVKKAEASKERDGLRGRNNSTCAIHNGDFSLKQKNPTIMDEYHSHMAYYSR
Subjt:  CFLRASPKSLSGKKQVPRWKGQVELARSKAEFWLLDVKKAEASKERDGLRGRNNSTCAIHNGDFSLKQKNPTIMDEYHSHMAYYSR

TrEMBL top hitse value%identityAlignment
A0A0A0LDZ2 Uncharacterized protein7.4e-1392.86Show/hide
Query:  GKKQVPRWKGQVELARSKAEFWLLDVKKAEASKERDGLRGRN
        GKKQVPRWKGQVE+ARSKAEFWLLDVKKAE SKER+GLRGRN
Subjt:  GKKQVPRWKGQVELARSKAEFWLLDVKKAEASKERDGLRGRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGTTTCTCTCGACCCCATGTATGAAGAGCCTTGTAGTGATGAGCTAGGTGGAAGAACTAGTTCAGAATGGAAAAATAACCCAGTTTGCTCGGAACACACTGCTGA
ATTGGCCTGTATCGACTCAGACGACAGCCTTCGAAACTCTTTCTGCTGTCTCAACTCTTTAGCTTTCTGCAATCGTCTAAATCTCTCCTGCAGCAAGGCAATGGAGGAGT
TCATTGCCCTGGCATTACAGTTTTCATTACTCATTCTCAAAGAAAAAGGAGGAAAAAAAAAACCAATCTCCTACACTTCGTGCTTCCTTCGTGCTTCGCCGAAGAGCCTG
TCAGGGAAGAAGCAGGTGCCAAGATGGAAAGGCCAAGTAGAACTGGCCAGGAGCAAAGCTGAGTTTTGGTTGTTGGATGTGAAGAAGGCAGAGGCTTCCAAAGAGAGAGA
TGGATTGAGAGGCAGGAATAACTCAACATGTGCAATACACAATGGTGATTTTTCTTTAAAACAAAAGAACCCTACCATCATGGATGAGTATCACTCTCATATGGCGTACT
ACTCAAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGACTGTTTCTCTCGACCCCATGTATGAAGAGCCTTGTAGTGATGAGCTAGGTGGAAGAACTAGTTCAGAATGGAAAAATAACCCAGTTTGCTCGGAACACACTGCTGA
ATTGGCCTGTATCGACTCAGACGACAGCCTTCGAAACTCTTTCTGCTGTCTCAACTCTTTAGCTTTCTGCAATCGTCTAAATCTCTCCTGCAGCAAGGCAATGGAGGAGT
TCATTGCCCTGGCATTACAGTTTTCATTACTCATTCTCAAAGAAAAAGGAGGAAAAAAAAAACCAATCTCCTACACTTCGTGCTTCCTTCGTGCTTCGCCGAAGAGCCTG
TCAGGGAAGAAGCAGGTGCCAAGATGGAAAGGCCAAGTAGAACTGGCCAGGAGCAAAGCTGAGTTTTGGTTGTTGGATGTGAAGAAGGCAGAGGCTTCCAAAGAGAGAGA
TGGATTGAGAGGCAGGAATAACTCAACATGTGCAATACACAATGGTGATTTTTCTTTAAAACAAAAGAACCCTACCATCATGGATGAGTATCACTCTCATATGGCGTACT
ACTCAAGATAA
Protein sequenceShow/hide protein sequence
MTVSLDPMYEEPCSDELGGRTSSEWKNNPVCSEHTAELACIDSDDSLRNSFCCLNSLAFCNRLNLSCSKAMEEFIALALQFSLLILKEKGGKKKPISYTSCFLRASPKSL
SGKKQVPRWKGQVELARSKAEFWLLDVKKAEASKERDGLRGRNNSTCAIHNGDFSLKQKNPTIMDEYHSHMAYYSR