CuGenDBv2

Gene ID	Carg12883
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein
Genome location	Carg_Chr05:10442174..10448082
RNA-Seq Expression	Carg12883
Synteny	Carg12883
Gene Ontology terms	NA
InterPro domains	IPR016123 - Mog1/PsbP, alpha/beta/alpha sandwich

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7030266.1 hypothetical protein SDJN02_08613, partial [Cucurbita argyrosperma subsp. argyrosperma]

7.3e-129

100

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Query:  MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQ
        MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQ
Subjt:  MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQ

Query:  FEDLTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFRTYYFYE
        FEDLTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFRTYYFYE
Subjt:  FEDLTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFRTYYFYE

Query:  FGKNEEHVALVATVNSGQAFVAWSNRTIVQMG
        FGKNEEHVALVATVNSGQAFVAWSNRTIVQMG
Subjt:  FGKNEEHVALVATVNSGQAFVAWSNRTIVQMG

XP_022946289.1 uncharacterized protein LOC111450417 isoform X1 [Cucurbita moschata]

6.2e-120

95.69

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Query:  MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQ
        MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQ
Subjt:  MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQ

Query:  FEDLTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLE----------AKDITDIGSLREAAKIFVPGGATLFSARTFKIKDD
        FEDLTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLE          AKDITDIGSLREAAKIFVPGGATLFSARTFKIKDD
Subjt:  FEDLTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLE----------AKDITDIGSLREAAKIFVPGGATLFSARTFKIKDD

Query:  EGFRTYYFYEFGKNEEHVALVATVNSGQAFVA
        EGFRTYYFYEFGKNEEHVALVATVNSGQAFVA
Subjt:  EGFRTYYFYEFGKNEEHVALVATVNSGQAFVA

XP_022946291.1 uncharacterized protein LOC111450417 isoform X2 [Cucurbita moschata]

2.3e-122

100

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Query:  MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQ
        MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQ
Subjt:  MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQ

Query:  FEDLTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFRTYYFYE
        FEDLTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFRTYYFYE
Subjt:  FEDLTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFRTYYFYE

Query:  FGKNEEHVALVATVNSGQAFVA
        FGKNEEHVALVATVNSGQAFVA
Subjt:  FGKNEEHVALVATVNSGQAFVA

XP_022999130.1 uncharacterized protein LOC111493605 isoform X2 [Cucurbita maxima]

1.6e-120

99.54

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Query:  LLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFED
        LLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILK+ASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFED
Subjt:  LLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFED

Query:  LTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFRTYYFYEFGK
        LTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFRTYYFYEFGK
Subjt:  LTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFRTYYFYEFGK

Query:  NEEHVALVATVNSGQAFVA
        NEEHVALVATVNSGQAFVA
Subjt:  NEEHVALVATVNSGQAFVA

XP_023521934.1 uncharacterized protein LOC111785779 [Cucurbita pepo subsp. pepo]

6.6e-122

99.55

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Query:  MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQ
        MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPT+LNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQ
Subjt:  MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQ

Query:  FEDLTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFRTYYFYE
        FEDLTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFRTYYFYE
Subjt:  FEDLTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFRTYYFYE

Query:  FGKNEEHVALVATVNSGQAFVA
        FGKNEEHVALVATVNSGQAFVA
Subjt:  FGKNEEHVALVATVNSGQAFVA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJH6 Uncharacterized protein

2.1e-105

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Query:  MALLLSLCL-HPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPP
        MA+ LSLC+ HPPN  QNPT+ VP PTT+ F  PT+LNS SKRHFILKTASLCLIS IPKCPV QSS+ SPTSK GLP +ANTKSWFQFYGDGFSIRVPP
Subjt:  MALLLSLCL-HPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPP

Query:  QFEDLTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFRTYYFY
        QFEDLTEPED++AGLSLYGDK KTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGG+TLFSARTFKIK+DEGFRTYYFY
Subjt:  QFEDLTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFRTYYFY

Query:  EFGKNEEHVALVATVNSGQAFVA
        EFGKNE+HVALVATVNSGQ FVA
Subjt:  EFGKNEEHVALVATVNSGQAFVA

A0A6J1G382 uncharacterized protein LOC111450417 isoform X2

1.1e-122

100

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Query:  MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQ
        MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQ
Subjt:  MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQ

Query:  FEDLTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFRTYYFYE
        FEDLTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFRTYYFYE
Subjt:  FEDLTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFRTYYFYE

Query:  FGKNEEHVALVATVNSGQAFVA
        FGKNEEHVALVATVNSGQAFVA
Subjt:  FGKNEEHVALVATVNSGQAFVA

A0A6J1G3F8 uncharacterized protein LOC111450417 isoform X1

3.0e-120

95.69

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Query:  MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQ
        MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQ
Subjt:  MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQ

Query:  FEDLTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLE----------AKDITDIGSLREAAKIFVPGGATLFSARTFKIKDD
        FEDLTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLE          AKDITDIGSLREAAKIFVPGGATLFSARTFKIKDD
Subjt:  FEDLTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLE----------AKDITDIGSLREAAKIFVPGGATLFSARTFKIKDD

Query:  EGFRTYYFYEFGKNEEHVALVATVNSGQAFVA
        EGFRTYYFYEFGKNEEHVALVATVNSGQAFVA
Subjt:  EGFRTYYFYEFGKNEEHVALVATVNSGQAFVA

A0A6J1KC82 uncharacterized protein LOC111493605 isoform X2

7.9e-121

99.54

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Query:  LLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFED
        LLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILK+ASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFED
Subjt:  LLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFED

Query:  LTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFRTYYFYEFGK
        LTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFRTYYFYEFGK
Subjt:  LTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFRTYYFYEFGK

Query:  NEEHVALVATVNSGQAFVA
        NEEHVALVATVNSGQAFVA
Subjt:  NEEHVALVATVNSGQAFVA

A0A6J1KIQ9 uncharacterized protein LOC111493605 isoform X1

1.6e-118

95.61

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Query:  LLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFED
        LLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILK+ASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFED
Subjt:  LLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFED

Query:  LTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLE---------AKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFR
        LTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLE         AKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFR
Subjt:  LTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLE---------AKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFR

Query:  TYYFYEFGKNEEHVALVATVNSGQAFVA
        TYYFYEFGKNEEHVALVATVNSGQAFVA
Subjt:  TYYFYEFGKNEEHVALVATVNSGQAFVA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G27390.1 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein

1.0e-67

57.89

Show/hide

Query:  MALLL-SLCLHPPNLQ-QNPTAAVPHPTTVGFHEPTTLNSNS--KRHFILKTASLCLISLI--PKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFS
        MA+LL SL LHPPN + QNP            ++P  L+S++  +R  +L+TASLC +S I   + P + +  +  T    L G+ANTKSWFQ++G GF+
Subjt:  MALLL-SLCLHPPNLQ-QNPTAAVPHPTTVGFHEPTTLNSNS--KRHFILKTASLCLISLI--PKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFS

Query:  IRVPPQFEDLTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFR
        IRVPP FED+ EPED++AGLSLYGDK K +TFAARF +PDGSEVLSVV RP+NQLKITFLEAKDI+D+GSL+ AA++FVPG AT++SART K+K++EG R
Subjt:  IRVPPQFEDLTEPEDFNAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFR

Query:  TYYFYEFGKNEEHVALVATVNSGQAFVA
         YYFYEFG++EE +ALVA+VN G+ ++A
Subjt:  TYYFYEFGKNEEHVALVATVNSGQAFVA

Sequences

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CDS sequence

Show/hide CDS sequence

mRNA sequence

Show/hide mRNA sequence

ATGGCCCTTCTTCTTTCTTTATGCCTCCACCCTCCAAACCTTCAGCAAAACCCCACCGCCGCCGTCCCCCACCCGACCACCGTCGGATTTCACGAGCCTACAACGCTGAA
TTCCAATTCCAAGAGACATTTCATCCTCAAAACGGCTTCACTCTGTCTAATTTCATTGATTCCAAAATGCCCAGTTGCCCAATCTTCCCAAATTTCGCCTACTTCGAAAC
AAGGCCTTCCTGGCCTTGCAAATACAAAGTCTTGGTTTCAGTTTTATGGTGATGGGTTCTCCATTCGTGTGCCGCCTCAGTTTGAAGACCTCACGGAGCCTGAGGATTTC
AATGCTGGACTCTCTCTTTATGGAGATAAGGTAAAAACGAAAACGTTCGCAGCTCGGTTTGGATCTCCTGATGGCTCTGAAGTTCTAAGCGTTGTCACTCGTCCAACGAA
TCAACTTAAGATCACCTTTCTAGAGGCGAAAGATATAACTGATATAGGTTCCTTGAGGGAGGCTGCAAAAATCTTTGTTCCAGGTGGTGCAACGTTATTTTCGGCCCGAA
CGTTTAAAATTAAGGATGATGAAGGTTTCAGGACGTATTACTTCTACGAGTTTGGGAAGAACGAAGAACACGTCGCGTTAGTAGCAACTGTTAACAGTGGACAGGCGTTT
GTTGCCTGGAGCAACCGCACCATTGTCCAAATGGGATGAAGATGGCATAAAACTCCGTTCTGCTGCTATATCTCTAACCGTGCTATAATCAATTGCTGATCAAGTTATTT
TCATTAGCTTGAGGAAGCTTTTGGTAAGTCCCCCAGTTGGCAGAGAGACAGCTAGATTTGTGTATACATTTTTGTAAGAATTGTACTTTGAAATGGGTATGCTGAGTGAT
GAGTGGTGCTTGATTAATGTGGTACCCTTTGTTCTTATATGATCGTTGTCAAACTTGAACTCGTTTTTTCTCTTTTGATAAGGTATATAGAGATGTCCACGGGATGGAGA
GTGGAGACTGGGAAGCTTTCCTTGTCTCTGTCTACATCTCTTGTTTATGTAACAGTTTAAGTTCACCGCTAATGGATATTGTCTGCTTTGGCCTA

Protein sequence

Show/hide protein sequence

MALLLSLCLHPPNLQQNPTAAVPHPTTVGFHEPTTLNSNSKRHFILKTASLCLISLIPKCPVAQSSQISPTSKQGLPGLANTKSWFQFYGDGFSIRVPPQFEDLTEPEDF
NAGLSLYGDKVKTKTFAARFGSPDGSEVLSVVTRPTNQLKITFLEAKDITDIGSLREAAKIFVPGGATLFSARTFKIKDDEGFRTYYFYEFGKNEEHVALVATVNSGQAF
VAWSNRTIVQMG

Carg12883 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome