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Carg12885 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12885
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionbranched-chain-amino-acid aminotransferase-like protein 1
Genome locationCarg_Chr05:10429231..10429721
RNA-Seq ExpressionCarg12885
SyntenyCarg12885
Gene Ontology termsGO:0008483 - transaminase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063686.1 branched-chain-amino-acid aminotransferase-like protein 1 [Cucumis melo var. makuwa]8.5e-2080Show/hide
Query:  MVEVLGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKAVEILNHF
        M E LGIDVSVPPSLHL+SAFL+MEPADSLL +AR+LG GLVTETVQ+FIWDHCI+KA E +NHF
Subjt:  MVEVLGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKAVEILNHF
KAG6599265.1 Protein-lysine N-methyltransferase EEF2KMT, partial [Cucurbita argyrosperma subsp. sororia]5.7e-2495.38Show/hide
Query:  MVEVLGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKAVEILNHF
        MVEVLGIDVSVPPSLHLISAFLAME ADSLLCMARELGRGLVTETVQRFIWDHCISKA EI NHF
Subjt:  MVEVLGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKAVEILNHF
KAG7030264.1 hypothetical protein SDJN02_08611 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-30100Show/hide
Query:  MVEVLGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKAVEILNHFTSISLF
        MVEVLGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKAVEILNHFTSISLF
Subjt:  MVEVLGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKAVEILNHFTSISLF
XP_022946299.1 LOW QUALITY PROTEIN: branched-chain-amino-acid aminotransferase-like protein 1 [Cucurbita moschata]1.6e-2393.85Show/hide
Query:  MVEVLGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKAVEILNHF
        M EVLGIDVSVPPSLHLISAFLAME ADSLLCMARELGRGLVTETVQRFIWDHCISKA EI NHF
Subjt:  MVEVLGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKAVEILNHF
XP_022998961.1 branched-chain-amino-acid aminotransferase-like protein 1 [Cucurbita maxima]4.8e-2392.31Show/hide
Query:  MVEVLGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKAVEILNHF
        M E LGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRG VTETVQRFIWDHCISKA EI NHF
Subjt:  MVEVLGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKAVEILNHF
TrEMBL top hitse value%identityAlignment
A0A1S3C025 LOW QUALITY PROTEIN: branched-chain-amino-acid aminotransferase-like protein 12.7e-1978.46Show/hide
Query:  MVEVLGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKAVEILNHF
        M E LGID SVPPSLHL+SAFL+MEPADSLL +AR+LG GLVTETVQ+FIWDHCI+KA E +NHF
Subjt:  MVEVLGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKAVEILNHF
A0A5A7VB82 Branched-chain-amino-acid aminotransferase-like protein 14.1e-2080Show/hide
Query:  MVEVLGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKAVEILNHF
        M E LGIDVSVPPSLHL+SAFL+MEPADSLL +AR+LG GLVTETVQ+FIWDHCI+KA E +NHF
Subjt:  MVEVLGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKAVEILNHF
A0A6J1DAX0 LOW QUALITY PROTEIN: branched-chain-amino-acid aminotransferase-like protein 12.9e-1879.37Show/hide
Query:  MVEVLGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKAVEILN
        M E  GI+V V PSLHL+SAFLAMEPADSLL MARELG GLVTETVQ+FIWDHCISKA E+ N
Subjt:  MVEVLGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKAVEILN
A0A6J1G3E7 LOW QUALITY PROTEIN: branched-chain-amino-acid aminotransferase-like protein 18.0e-2493.85Show/hide
Query:  MVEVLGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKAVEILNHF
        M EVLGIDVSVPPSLHLISAFLAME ADSLLCMARELGRGLVTETVQRFIWDHCISKA EI NHF
Subjt:  MVEVLGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKAVEILNHF
A0A6J1KBP2 branched-chain-amino-acid aminotransferase-like protein 12.3e-2392.31Show/hide
Query:  MVEVLGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKAVEILNHF
        M E LGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRG VTETVQRFIWDHCISKA EI NHF
Subjt:  MVEVLGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKAVEILNHF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G27400.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein1.1e-0647.73Show/hide
Query:  LHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKA
        L+++SAFLA+EP DS++ +AR    G +TE  QRF W+ C+  A
Subjt:  LHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKA
AT5G27410.2 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein1.1e-0647.73Show/hide
Query:  LHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKA
        L+++SAFLA+EP DS++ +AR    G +TE  QRF W+ C+  A
Subjt:  LHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAGGTGCTCGGCATCGACGTCTCTGTTCCTCCTAGCCTCCATCTCATCTCTGCTTTCCTCGCCATGGAGCCAGCTGATTCTTTACTTTGCATGGCCAGGGAATT
GGGTCGCGGATTAGTGACCGAGACAGTGCAGAGGTTCATTTGGGATCATTGCATTAGCAAAGCTGTTGAGATTCTAAACCATTTCACTTCCATTTCATTGTTTTAA
mRNA sequenceShow/hide mRNA sequence
TTTCTCTATTCTCGCCGCTTCCCAGTTTCGCATTGCGATTTGATCGCTACGGCTCGCACTGTCTGTACAATCCGACCACCAACCATGGTGGAGGTGCTCGGCATCGACGT
CTCTGTTCCTCCTAGCCTCCATCTCATCTCTGCTTTCCTCGCCATGGAGCCAGCTGATTCTTTACTTTGCATGGCCAGGGAATTGGGTCGCGGATTAGTGACCGAGACAG
TGCAGAGGTTCATTTGGGATCATTGCATTAGCAAAGCTGTTGAGATTCTAAACCATTTCACTTCCATTTCATTGTTTTAA
Protein sequenceShow/hide protein sequence
MVEVLGIDVSVPPSLHLISAFLAMEPADSLLCMARELGRGLVTETVQRFIWDHCISKAVEILNHFTSISLF