CuGenDBv2

Gene ID	Carg12894
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RING-type domain-containing protein
Genome location	Carg_Chr05:10372902..10376702
RNA-Seq Expression	Carg12894
Synteny	Carg12894
Gene Ontology terms	GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR001841 - Zinc finger, RING-type IPR013083 - Zinc finger, RING/FYVE/PHD-type IPR017907 - Zinc finger, RING-type, conserved site IPR018957 - Zinc finger, C3HC4 RING-type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7030255.1 E3 ubiquitin-protein ligase Topors [Cucurbita argyrosperma subsp. argyrosperma]

1.4e-160

100

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Query:  MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS
        MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS
Subjt:  MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS

Query:  FILSKAQKYRLQCYYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILD
        FILSKAQKYRLQCYYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILD
Subjt:  FILSKAQKYRLQCYYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILD

Query:  AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMAVENLGHEPVTPYLFIFDYDPDDGD
        AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMAVENLGHEPVTPYLFIFDYDPDDGD
Subjt:  AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMAVENLGHEPVTPYLFIFDYDPDDGD

XP_022946760.1 uncharacterized protein LOC111450733 [Cucurbita moschata]

1.6e-159

99.27

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Query:  MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS
        MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS
Subjt:  MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS

Query:  FILSKAQKYRLQCYYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILD
        FILSKAQKYRLQCYYTEPGFLDDIFSV+KYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILD
Subjt:  FILSKAQKYRLQCYYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILD

Query:  AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMAVENLGHEPVTPYLFIFDYDPDDGD
        AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMAVE+LGHEPVTPYLFIFDYDPDDGD
Subjt:  AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMAVENLGHEPVTPYLFIFDYDPDDGD

XP_022999126.1 uncharacterized protein LOC111493604 [Cucurbita maxima]

6.3e-156

97.44

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Query:  MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS
        MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS
Subjt:  MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS

Query:  FILSKAQKYRLQCYYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILD
        FILSKAQKYRLQCYYTEPGFLDDIF+V+KYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNE RYQTETPQLKR+RFNSMILD
Subjt:  FILSKAQKYRLQCYYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILD

Query:  AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMAVENLGHEPVTPYLFIFDYDPDDGD
        AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKP GPSMAVE+LG EPVTPYLFIFDYDPDDGD
Subjt:  AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMAVENLGHEPVTPYLFIFDYDPDDGD

XP_023545827.1 uncharacterized protein LOC111805146 [Cucurbita pepo subsp. pepo]

3.6e-159

98.9

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Query:  MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS
        MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS
Subjt:  MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS

Query:  FILSKAQKYRLQCYYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILD
        FILSKAQKYRLQCYYTEPGFLDDIFSV+KYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKR+RFNSMILD
Subjt:  FILSKAQKYRLQCYYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILD

Query:  AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMAVENLGHEPVTPYLFIFDYDPDDGD
        AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMAVE+LGHEPVTPYLFIFDYDPDDGD
Subjt:  AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMAVENLGHEPVTPYLFIFDYDPDDGD

XP_038889020.1 uncharacterized protein LOC120078783 isoform X1 [Benincasa hispida]

3.1e-139

87.87

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Query:  MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS
        MELQ TAP+E  TSSS SDDTNPCPICLG IIQPSYLDKCFHKFCYNCI+QWTKVVSGKHSC LSSIKCPLCKTES SIIHGLDGHC QRHYVN+DFQDS
Subjt:  MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS

Query:  FILSKAQKYRLQCYYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILD
        FILSKA KYRLQCYYTEPGFLDDIF+V++YWKLRKYLQANQWLEVWLKRELQALIQEED+DIIMHHLLG I+SFFSRNEPRYQTETP+LKRE FN M+LD
Subjt:  FILSKAQKYRLQCYYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILD

Query:  AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMAV-ENLGHEPVTPYLFIFDYDPDD
        AAKPFLS RADRFVLELELFLASGLNIEAYDSVYLQRLGWN+PV P MA+ E+LG +PVTPYL+IF+YDPDD
Subjt:  AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMAV-ENLGHEPVTPYLFIFDYDPDD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LLN5 RING-type domain-containing protein

2.4e-132

83.94

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Query:  MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS
        MELQ TA +EMET +S+SD TNPCPICLGPI Q SYLDKCFH FCYNCIVQWTKVVSGK SCTLSSIKCPLCKTES SIIHGLDGH FQRHYVN DFQDS
Subjt:  MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS

Query:  FILSKAQKYRLQCYYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILD
        FILSKA +YRLQCYYTEPGFL+DIF V++YWKL+KYLQANQWLEVWLKRELQALIQEEDVDIIMHH LG I+SFF RNEP YQTETP+LKR+RF+  ILD
Subjt:  FILSKAQKYRLQCYYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILD

Query:  AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMA-VENLGHEPVTPYLFIFDYDPDDGD
        AAKPFLS RADRF+LELELFLASGLNIEAYDSVYLQRLGWNKP+ PS+A  E+LG + VTPYL+IFD DPDDGD
Subjt:  AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMA-VENLGHEPVTPYLFIFDYDPDDGD

A0A5D3D454 RING zinc finger protein-like protein

3.0e-127

81.62

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Query:  MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS
        MELQ  A +E++TS+S+SD T+PCPICLGPI Q SYLDKCFH FCYNCIVQWTKVVSGK SC LSSIKCPLCKTES SIIHGLDGH FQRHYVN DFQDS
Subjt:  MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS

Query:  FILSKAQKYRLQCYYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILD
        FILSKA KYRLQCYYTEPGFL+DIF V++YWKL+KYLQANQWLEVWLKRELQALIQEEDVDIIMHH +G I+SFF RNEP+YQTETP+LKR+RF+  ILD
Subjt:  FILSKAQKYRLQCYYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILD

Query:  AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMA-VENLGHEPVTPYLFIFDYDPDD
        AAKPFLS RADRF+LELELFLASGLNIEAYDSVYLQRLGWN+P+  S+A  E+LG + VTPYL+IFD DPDD
Subjt:  AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMA-VENLGHEPVTPYLFIFDYDPDD

A0A6J1DAB4 uncharacterized protein LOC111018833

8.6e-135

84.31

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Query:  MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS
        MELQ TA  EMET+SSS DDTNPCPICLG II+PSYLDKCFHKFCYNCIVQWTKVVSGK SC LS IKCPLCKTES SIIHGLDGHCFQRHYVNQDFQDS
Subjt:  MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS

Query:  FILSKAQKYRLQCYYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILD
        FILSKA KYRLQCYYTEPGFL+DIF+V++YWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLG I+ FFSRNE +YQTE+P++K+E+F+S++ D
Subjt:  FILSKAQKYRLQCYYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILD

Query:  AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMAV-ENLGHEPVTPYLFIFDYDPDDGD
        AAKPFLS RADRFV ELELFLASGLNIEAYDSVYLQRLGW++PV PS+A+ E+LG +PVTPYL+IFDYDPDDG+
Subjt:  AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMAV-ENLGHEPVTPYLFIFDYDPDDGD

A0A6J1G4Z2 uncharacterized protein LOC111450733

7.8e-160

99.27

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Query:  MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS
        MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS
Subjt:  MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS

Query:  FILSKAQKYRLQCYYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILD
        FILSKAQKYRLQCYYTEPGFLDDIFSV+KYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILD
Subjt:  FILSKAQKYRLQCYYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILD

Query:  AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMAVENLGHEPVTPYLFIFDYDPDDGD
        AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMAVE+LGHEPVTPYLFIFDYDPDDGD
Subjt:  AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMAVENLGHEPVTPYLFIFDYDPDDGD

A0A6J1KC78 uncharacterized protein LOC111493604

3.0e-156

97.44

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Query:  MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS
        MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS
Subjt:  MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDS

Query:  FILSKAQKYRLQCYYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILD
        FILSKAQKYRLQCYYTEPGFLDDIF+V+KYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNE RYQTETPQLKR+RFNSMILD
Subjt:  FILSKAQKYRLQCYYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILD

Query:  AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMAVENLGHEPVTPYLFIFDYDPDDGD
        AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKP GPSMAVE+LG EPVTPYLFIFDYDPDDGD
Subjt:  AAKPFLSERADRFVLELELFLASGLNIEAYDSVYLQRLGWNKPVGPSMAVENLGHEPVTPYLFIFDYDPDDGD

SwissProt top hits

e value

%identity

Alignment

P29129 E3 ubiquitin-protein ligase ICP0

1.6e-05

39.34

Show/hide

Query:  CPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLD
        CPICL      +    C HKFC +CI +W          TL+S  CPLC     SI+H +D
Subjt:  CPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLD

Q80Z37 E3 ubiquitin-protein ligase Topors

4.4e-11

30.97

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Query:  GTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGH-CFQRHYVNQDFQDSFIL
        GT+ L+    + +S D+  CPICL      SYLD+C HKFC+ C+ +W+K          +  +CPLCK    SI H +     F+ + +   +  SF  
Subjt:  GTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGH-CFQRHYVNQDFQDSFIL

Query:  SKAQKYRLQCYYT
         + +++R +   T
Subjt:  SKAQKYRLQCYYT

Q9NS56 E3 ubiquitin-protein ligase Topors

2.2e-10

33.33

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Query:  GTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGH-CFQRHYVNQDFQDSFI
        GT+ L+    + +S D+  CPICL      SYLD+C HKFC+ C+ +W+K          +  +CPLCK    SI H +     F+ + +   +  SF+
Subjt:  GTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGH-CFQRHYVNQDFQDSFI

Arabidopsis top hits

e value

%identity

Alignment

AT2G39100.1 RING/U-box superfamily protein

7.5e-06

31.87

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Query:  LEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSV
        +E W++RELQA++ + D  +I+H           R   R   +T  L  +  +S+     + FLS++ D F  EL  F  S L +E YD+V
Subjt:  LEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILDAAKPFLSERADRFVLELELFLASGLNIEAYDSV

AT3G05250.1 RING/U-box superfamily protein

4.6e-80

53.93

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Query:  SSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQC
        S     D +PCPICLG  ++ SYLD CFHKFC+NCI QW KVVS K S   SS+ CPLCKTE+ SIIH  DG  F+RHY++ +  D F+L+K Q+YRLQC
Subjt:  SSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYRLQC

Query:  YYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLK---RERFNSMILDAAKPFLSERA
        YYTE GFL D+F V ++WKL+K+LQ N+ LE WL+RELQAL+QEEDVDI++HHL+G + SF  R + R + ET   +   +E+F +++ +AA+PF+  R 
Subjt:  YYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLK---RERFNSMILDAAKPFLSERA

Query:  DRFVLELELFLASGLNIEAYDSVYLQRLGWN--KPVGPSM-----AVENLGHEPVTPYLFIFDYDPD
        DRFV ELELFLA+GLN+EAYD++Y Q L  N  + +G +        E+     VTPYLFIF+ D D
Subjt:  DRFVLELELFLASGLNIEAYDSVYLQRLGWN--KPVGPSM-----AVENLGHEPVTPYLFIFDYDPD

AT4G10940.1 RING/U-box protein

2.4e-04

31.34

Show/hide

Query:  LEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTE
        +E+E +  +  +   C IC+  II    LD C H FC+ CI  W+ +++           CPLC+ E
Subjt:  LEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAATTGCAGGGCACTGCGCCATTGGAGATGGAGACAAGCAGTTCCTCTTCCGACGATACGAACCCTTGCCCGATCTGCCTCGGACCCATAATTCAACCTTCCTATCT
CGACAAATGCTTCCATAAATTTTGTTACAATTGCATTGTGCAATGGACTAAAGTGGTTTCTGGAAAGCACTCTTGCACACTTTCATCCATTAAGTGCCCTTTATGCAAGA
CAGAAAGTCCTTCTATAATACATGGATTAGATGGACATTGTTTCCAAAGACATTATGTTAATCAGGATTTTCAGGATAGCTTTATCTTATCAAAAGCTCAAAAGTATAGA
TTACAGTGCTATTATACTGAACCAGGTTTCTTGGATGACATATTCAGTGTAAAGAAGTATTGGAAGTTACGGAAGTATCTACAGGCAAACCAGTGGCTCGAAGTTTGGTT
GAAAAGGGAACTTCAAGCTTTGATTCAGGAAGAAGATGTTGACATAATTATGCACCACCTGCTTGGTTCAATTCATTCATTTTTTAGTAGAAATGAACCTAGGTATCAAA
CAGAAACTCCTCAGCTGAAGAGGGAAAGGTTTAACAGCATGATCCTTGATGCAGCGAAGCCATTCCTGTCAGAAAGAGCGGACCGGTTCGTGCTCGAGTTGGAGCTGTTT
CTTGCTTCAGGTTTAAACATCGAAGCCTATGATTCGGTTTACTTGCAACGGCTGGGTTGGAACAAGCCTGTCGGACCCAGCATGGCGGTAGAAAATCTTGGACACGAACC
TGTAACTCCATACTTGTTTATCTTTGACTATGACCCTGATGATGGTGATTAA

mRNA sequence

Show/hide mRNA sequence

CGTTCTCATTGTAAATCCTTGTCGGGAAGGGGCATGGAATTGCAGGGCACTGCGCCATTGGAGATGGAGACAAGCAGTTCCTCTTCCGACGATACGAACCCTTGCCCGAT
CTGCCTCGGACCCATAATTCAACCTTCCTATCTCGACAAATGCTTCCATAAATTTTGTTACAATTGCATTGTGCAATGGACTAAAGTGGTTTCTGGAAAGCACTCTTGCA
CACTTTCATCCATTAAGTGCCCTTTATGCAAGACAGAAAGTCCTTCTATAATACATGGATTAGATGGACATTGTTTCCAAAGACATTATGTTAATCAGGATTTTCAGGAT
AGCTTTATCTTATCAAAAGCTCAAAAGTATAGATTACAGTGCTATTATACTGAACCAGGTTTCTTGGATGACATATTCAGTGTAAAGAAGTATTGGAAGTTACGGAAGTA
TCTACAGGCAAACCAGTGGCTCGAAGTTTGGTTGAAAAGGGAACTTCAAGCTTTGATTCAGGAAGAAGATGTTGACATAATTATGCACCACCTGCTTGGTTCAATTCATT
CATTTTTTAGTAGAAATGAACCTAGGTATCAAACAGAAACTCCTCAGCTGAAGAGGGAAAGGTTTAACAGCATGATCCTTGATGCAGCGAAGCCATTCCTGTCAGAAAGA
GCGGACCGGTTCGTGCTCGAGTTGGAGCTGTTTCTTGCTTCAGGTTTAAACATCGAAGCCTATGATTCGGTTTACTTGCAACGGCTGGGTTGGAACAAGCCTGTCGGACC
CAGCATGGCGGTAGAAAATCTTGGACACGAACCTGTAACTCCATACTTGTTTATCTTTGACTATGACCCTGATGATGGTGATTAA

Protein sequence

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MELQGTAPLEMETSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESPSIIHGLDGHCFQRHYVNQDFQDSFILSKAQKYR
LQCYYTEPGFLDDIFSVKKYWKLRKYLQANQWLEVWLKRELQALIQEEDVDIIMHHLLGSIHSFFSRNEPRYQTETPQLKRERFNSMILDAAKPFLSERADRFVLELELF
LASGLNIEAYDSVYLQRLGWNKPVGPSMAVENLGHEPVTPYLFIFDYDPDDGD

Carg12894 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome