; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg12958 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12958
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionFRIGIDA interacting protein 1
Genome locationCarg_Chr10:3556747..3564068
RNA-Seq ExpressionCarg12958
SyntenyCarg12958
Gene Ontology termsGO:0005765 - lysosomal membrane (cellular component)
GO:0005770 - late endosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR029399 - TMEM192 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590036.1 Protein FIP1, partial [Cucurbita argyrosperma subsp. sororia]6.2e-14082.95Show/hide
Query:  MHLVEPLLCSCDVVLLMLTGLEISFQFILRNQAIEIDHLSTSLIVLTYQKVLMNNSTKRYDYEMIFILFLEVEPLFIISGIFQQYLVYQVQKIRLQGYYS
        MHLVEPLLCSCDVVLLMLT                                                            GIFQQYLVYQVQKIRLQGYYS
Subjt:  MHLVEPLLCSCDVVLLMLTGLEISFQFILRNQAIEIDHLSTSLIVLTYQKVLMNNSTKRYDYEMIFILFLEVEPLFIISGIFQQYLVYQVQKIRLQGYYS

Query:  FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR
        FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR
Subjt:  FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR

Query:  LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE
        LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE
Subjt:  LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE

Query:  RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS
        RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS
Subjt:  RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS

KAG7023699.1 Transmembrane protein [Cucurbita argyrosperma subsp. argyrosperma]1.5e-181100Show/hide
Query:  MHLVEPLLCSCDVVLLMLTGLEISFQFILRNQAIEIDHLSTSLIVLTYQKVLMNNSTKRYDYEMIFILFLEVEPLFIISGIFQQYLVYQVQKIRLQGYYS
        MHLVEPLLCSCDVVLLMLTGLEISFQFILRNQAIEIDHLSTSLIVLTYQKVLMNNSTKRYDYEMIFILFLEVEPLFIISGIFQQYLVYQVQKIRLQGYYS
Subjt:  MHLVEPLLCSCDVVLLMLTGLEISFQFILRNQAIEIDHLSTSLIVLTYQKVLMNNSTKRYDYEMIFILFLEVEPLFIISGIFQQYLVYQVQKIRLQGYYS

Query:  FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR
        FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR
Subjt:  FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR

Query:  LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE
        LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE
Subjt:  LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE

Query:  RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS
        RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS
Subjt:  RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS

XP_022961268.1 uncharacterized protein LOC111461818 isoform X1 [Cucurbita moschata]6.2e-14082.95Show/hide
Query:  MHLVEPLLCSCDVVLLMLTGLEISFQFILRNQAIEIDHLSTSLIVLTYQKVLMNNSTKRYDYEMIFILFLEVEPLFIISGIFQQYLVYQVQKIRLQGYYS
        MHLVEPLLCSCDVVLLMLT                                                            GIFQQYLVYQVQKIRLQGYYS
Subjt:  MHLVEPLLCSCDVVLLMLTGLEISFQFILRNQAIEIDHLSTSLIVLTYQKVLMNNSTKRYDYEMIFILFLEVEPLFIISGIFQQYLVYQVQKIRLQGYYS

Query:  FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR
        FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR
Subjt:  FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR

Query:  LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE
        LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE
Subjt:  LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE

Query:  RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS
        RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS
Subjt:  RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS

XP_022961271.1 uncharacterized protein LOC111461818 isoform X2 [Cucurbita moschata]6.2e-14082.95Show/hide
Query:  MHLVEPLLCSCDVVLLMLTGLEISFQFILRNQAIEIDHLSTSLIVLTYQKVLMNNSTKRYDYEMIFILFLEVEPLFIISGIFQQYLVYQVQKIRLQGYYS
        MHLVEPLLCSCDVVLLMLT                                                            GIFQQYLVYQVQKIRLQGYYS
Subjt:  MHLVEPLLCSCDVVLLMLTGLEISFQFILRNQAIEIDHLSTSLIVLTYQKVLMNNSTKRYDYEMIFILFLEVEPLFIISGIFQQYLVYQVQKIRLQGYYS

Query:  FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR
        FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR
Subjt:  FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR

Query:  LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE
        LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE
Subjt:  LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE

Query:  RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS
        RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS
Subjt:  RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS

XP_022988290.1 uncharacterized protein LOC111485584 isoform X1 [Cucurbita maxima]6.2e-14082.95Show/hide
Query:  MHLVEPLLCSCDVVLLMLTGLEISFQFILRNQAIEIDHLSTSLIVLTYQKVLMNNSTKRYDYEMIFILFLEVEPLFIISGIFQQYLVYQVQKIRLQGYYS
        MHLVEPLLCSCDVVLLMLT                                                            GIFQQYLVYQVQKIRLQGYYS
Subjt:  MHLVEPLLCSCDVVLLMLTGLEISFQFILRNQAIEIDHLSTSLIVLTYQKVLMNNSTKRYDYEMIFILFLEVEPLFIISGIFQQYLVYQVQKIRLQGYYS

Query:  FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR
        FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR
Subjt:  FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR

Query:  LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE
        LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE
Subjt:  LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE

Query:  RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS
        RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS
Subjt:  RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS

TrEMBL top hitse value%identityAlignment
A0A5A7UKR5 Uncharacterized protein1.9e-13480.34Show/hide
Query:  HLVEPLLCSCDVVLLMLTGLEISFQFILRNQAIEIDHLSTSLIVLTYQKVLMNNSTKRYDYEMIFILFLEVEPLFIISGIFQQYLVYQVQKIRLQGYYSF
        HLVEPLLCSC VVLLMLT                                                            GIFQQYLVYQV KIRLQGYYSF
Subjt:  HLVEPLLCSCDVVLLMLTGLEISFQFILRNQAIEIDHLSTSLIVLTYQKVLMNNSTKRYDYEMIFILFLEVEPLFIISGIFQQYLVYQVQKIRLQGYYSF

Query:  SQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGRL
        SQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILR+IMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGRL
Subjt:  SQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGRL

Query:  SDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENER
        SDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENER
Subjt:  SDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENER

Query:  LRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS
        LRAILGEWSTRAAKLERALEAER+SN+ELQKRISTLKK  HASETSE Q S
Subjt:  LRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS

A0A6J1H9W4 uncharacterized protein LOC111461818 isoform X23.0e-14082.95Show/hide
Query:  MHLVEPLLCSCDVVLLMLTGLEISFQFILRNQAIEIDHLSTSLIVLTYQKVLMNNSTKRYDYEMIFILFLEVEPLFIISGIFQQYLVYQVQKIRLQGYYS
        MHLVEPLLCSCDVVLLMLT                                                            GIFQQYLVYQVQKIRLQGYYS
Subjt:  MHLVEPLLCSCDVVLLMLTGLEISFQFILRNQAIEIDHLSTSLIVLTYQKVLMNNSTKRYDYEMIFILFLEVEPLFIISGIFQQYLVYQVQKIRLQGYYS

Query:  FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR
        FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR
Subjt:  FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR

Query:  LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE
        LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE
Subjt:  LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE

Query:  RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS
        RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS
Subjt:  RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS

A0A6J1HBP9 uncharacterized protein LOC111461818 isoform X13.0e-14082.95Show/hide
Query:  MHLVEPLLCSCDVVLLMLTGLEISFQFILRNQAIEIDHLSTSLIVLTYQKVLMNNSTKRYDYEMIFILFLEVEPLFIISGIFQQYLVYQVQKIRLQGYYS
        MHLVEPLLCSCDVVLLMLT                                                            GIFQQYLVYQVQKIRLQGYYS
Subjt:  MHLVEPLLCSCDVVLLMLTGLEISFQFILRNQAIEIDHLSTSLIVLTYQKVLMNNSTKRYDYEMIFILFLEVEPLFIISGIFQQYLVYQVQKIRLQGYYS

Query:  FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR
        FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR
Subjt:  FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR

Query:  LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE
        LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE
Subjt:  LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE

Query:  RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS
        RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS
Subjt:  RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS

A0A6J1JCN1 uncharacterized protein LOC111485584 isoform X23.0e-14082.95Show/hide
Query:  MHLVEPLLCSCDVVLLMLTGLEISFQFILRNQAIEIDHLSTSLIVLTYQKVLMNNSTKRYDYEMIFILFLEVEPLFIISGIFQQYLVYQVQKIRLQGYYS
        MHLVEPLLCSCDVVLLMLT                                                            GIFQQYLVYQVQKIRLQGYYS
Subjt:  MHLVEPLLCSCDVVLLMLTGLEISFQFILRNQAIEIDHLSTSLIVLTYQKVLMNNSTKRYDYEMIFILFLEVEPLFIISGIFQQYLVYQVQKIRLQGYYS

Query:  FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR
        FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR
Subjt:  FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR

Query:  LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE
        LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE
Subjt:  LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE

Query:  RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS
        RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS
Subjt:  RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS

A0A6J1JJ60 uncharacterized protein LOC111485584 isoform X13.0e-14082.95Show/hide
Query:  MHLVEPLLCSCDVVLLMLTGLEISFQFILRNQAIEIDHLSTSLIVLTYQKVLMNNSTKRYDYEMIFILFLEVEPLFIISGIFQQYLVYQVQKIRLQGYYS
        MHLVEPLLCSCDVVLLMLT                                                            GIFQQYLVYQVQKIRLQGYYS
Subjt:  MHLVEPLLCSCDVVLLMLTGLEISFQFILRNQAIEIDHLSTSLIVLTYQKVLMNNSTKRYDYEMIFILFLEVEPLFIISGIFQQYLVYQVQKIRLQGYYS

Query:  FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR
        FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR
Subjt:  FSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGR

Query:  LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE
        LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE
Subjt:  LSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENE

Query:  RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS
        RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS
Subjt:  RLRAILGEWSTRAAKLERALEAERISNLELQKRISTLKKLSHASETSEQQGS

SwissProt top hitse value%identityAlignment
Q8S8K9 Protein FIP14.1e-10274.64Show/hide
Query:  LFIISGIFQQYLVYQVQKIRLQGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQP
        L +++G+FQQY VYQVQKIRLQGYYSFSQKLKH+VRLPFA+ AYGTAA+LLV+VW PQI  LSI  + R+IML+EAV AG FM +YI YV +YNS+NS+P
Subjt:  LFIISGIFQQYLVYQVQKIRLQGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQP

Query:  DVLKSLYSPLQQSSSLEDLRYHDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLA
        DVLKSLYSPLQ SSS+E LRY++ GRLSDQQ ALLQYQRENLHFL+EEIL LQE LSKYE+S DGSTPQVDLAH+LAARDQELRTLSAEMNQ+ SELRLA
Subjt:  DVLKSLYSPLQQSSSLEDLRYHDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLA

Query:  RSVIAERDTEIQKLLTTNKQYVEENERLRAILGEWSTRAAKLERALEAERISNLELQKRI-STLKKLSHASETSEQ
        RS+IAERD E+Q++ +TN QY+EENERLRAIL EWS RAA LERALE ER+SN ELQK + ST +K    + TSEQ
Subjt:  RSVIAERDTEIQKLLTTNKQYVEENERLRAILGEWSTRAAKLERALEAERISNLELQKRI-STLKKLSHASETSEQ

Q9CXT7 Transmembrane protein 1924.7e-0525.32Show/hide
Query:  LFIISGIFQQYLVYQVQKIRLQGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWE---PQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLN
        L+I+  +F++Y+ Y  +K+R +GY    +  +H+  L   + + G  ALLL++  +   P+ S L + +IL  ++ +E +C+ S +I+YI  ++++N   
Subjt:  LFIISGIFQQYLVYQVQKIRLQGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWE---PQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLN

Query:  SQPDVLKSLYSPLQQSSSLEDLRYHDVGRLS---DQQMALLQYQRENLHFLNEEILRL
          PDVL+        S++  +  +  V  L    ++Q  ++ Y + +   L++ +L L
Subjt:  SQPDVLKSLYSPLQQSSSLEDLRYHDVGRLS---DQQMALLQYQRENLHFLNEEILRL

Arabidopsis top hitse value%identityAlignment
AT2G06005.1 FRIGIDA interacting protein 12.9e-10374.64Show/hide
Query:  LFIISGIFQQYLVYQVQKIRLQGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQP
        L +++G+FQQY VYQVQKIRLQGYYSFSQKLKH+VRLPFA+ AYGTAA+LLV+VW PQI  LSI  + R+IML+EAV AG FM +YI YV +YNS+NS+P
Subjt:  LFIISGIFQQYLVYQVQKIRLQGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQP

Query:  DVLKSLYSPLQQSSSLEDLRYHDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLA
        DVLKSLYSPLQ SSS+E LRY++ GRLSDQQ ALLQYQRENLHFL+EEIL LQE LSKYE+S DGSTPQVDLAH+LAARDQELRTLSAEMNQ+ SELRLA
Subjt:  DVLKSLYSPLQQSSSLEDLRYHDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLA

Query:  RSVIAERDTEIQKLLTTNKQYVEENERLRAILGEWSTRAAKLERALEAERISNLELQKRI-STLKKLSHASETSEQ
        RS+IAERD E+Q++ +TN QY+EENERLRAIL EWS RAA LERALE ER+SN ELQK + ST +K    + TSEQ
Subjt:  RSVIAERDTEIQKLLTTNKQYVEENERLRAILGEWSTRAAKLERALEAERISNLELQKRI-STLKKLSHASETSEQ

AT2G06005.2 FRIGIDA interacting protein 15.0e-9571.74Show/hide
Query:  LFIISGIFQQYLVYQVQKIRLQGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQP
        L +++G+FQQY VYQVQKIRLQGYYSFSQKLKH+VRLPFA+ AYGTAA+LLV+VW PQI  LSI  + R+IML+EAV AG FM +YI             
Subjt:  LFIISGIFQQYLVYQVQKIRLQGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQP

Query:  DVLKSLYSPLQQSSSLEDLRYHDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLA
        DVLKSLYSPLQ SSS+E LRY++ GRLSDQQ ALLQYQRENLHFL+EEIL LQE LSKYE+S DGSTPQVDLAH+LAARDQELRTLSAEMNQ+ SELRLA
Subjt:  DVLKSLYSPLQQSSSLEDLRYHDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLA

Query:  RSVIAERDTEIQKLLTTNKQYVEENERLRAILGEWSTRAAKLERALEAERISNLELQKRI-STLKKLSHASETSEQ
        RS+IAERD E+Q++ +TN QY+EENERLRAIL EWS RAA LERALE ER+SN ELQK + ST +K    + TSEQ
Subjt:  RSVIAERDTEIQKLLTTNKQYVEENERLRAILGEWSTRAAKLERALEAERISNLELQKRI-STLKKLSHASETSEQ

AT5G20580.1 BEST Arabidopsis thaliana protein match is: FRIGIDA interacting protein 1 (TAIR:AT2G06005.1)1.3e-9570.83Show/hide
Query:  LFIISGIFQQYLVYQVQKIRLQGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQP
        L +++G+FQQY V QVQKIRLQGYYSFSQKLKH+VRLPFA+ AYGTA++LL M W P +S L I  + R IM +EA+ A SFMI+++ YV++YNS+NSQP
Subjt:  LFIISGIFQQYLVYQVQKIRLQGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQP

Query:  DVLKSLYSPLQQSSSLEDLRYHDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLA
        DVL SLYSPL Q ++LE LRYH+ GRLSDQQMALLQYQRENLH+L+EEILRLQE LSKYE ++  STPQVDLAH++A RDQELRTLSAE++Q+ SEL LA
Subjt:  DVLKSLYSPLQQSSSLEDLRYHDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLA

Query:  RSVIAERDTEIQKLLTTNKQYVEENERLRAILGEWSTRAAKLERALEAERISNLELQKRISTLK
        RS+I+ERD EIQ +  TN QYV ENERLRAILGEWS RAAKLERALE ERISN+EL+K++S L+
Subjt:  RSVIAERDTEIQKLLTTNKQYVEENERLRAILGEWSTRAAKLERALEAERISNLELQKRISTLK

AT5G20580.2 BEST Arabidopsis thaliana protein match is: FRIGIDA interacting protein 1 (TAIR:AT2G06005.1)1.3e-9570.83Show/hide
Query:  LFIISGIFQQYLVYQVQKIRLQGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQP
        L +++G+FQQY V QVQKIRLQGYYSFSQKLKH+VRLPFA+ AYGTA++LL M W P +S L I  + R IM +EA+ A SFMI+++ YV++YNS+NSQP
Subjt:  LFIISGIFQQYLVYQVQKIRLQGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQP

Query:  DVLKSLYSPLQQSSSLEDLRYHDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLA
        DVL SLYSPL Q ++LE LRYH+ GRLSDQQMALLQYQRENLH+L+EEILRLQE LSKYE ++  STPQVDLAH++A RDQELRTLSAE++Q+ SEL LA
Subjt:  DVLKSLYSPLQQSSSLEDLRYHDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLA

Query:  RSVIAERDTEIQKLLTTNKQYVEENERLRAILGEWSTRAAKLERALEAERISNLELQKRISTLK
        RS+I+ERD EIQ +  TN QYV ENERLRAILGEWS RAAKLERALE ERISN+EL+K++S L+
Subjt:  RSVIAERDTEIQKLLTTNKQYVEENERLRAILGEWSTRAAKLERALEAERISNLELQKRISTLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTTGGTTGAACCATTGCTCTGCAGTTGCGATGTCGTTCTCTTGATGCTCACAGGATTAGAAATTTCATTTCAGTTCATTCTTAGGAATCAAGCTATTGAAATCGA
TCATTTAAGCACATCTTTAATCGTCTTGACATATCAAAAGGTTTTGATGAATAATTCAACCAAGAGGTATGATTATGAAATGATCTTTATACTTTTTTTAGAAGTTGAAC
CACTGTTTATTATTTCAGGTATATTTCAGCAATATCTAGTATACCAAGTCCAGAAAATTCGATTGCAGGGTTATTATAGCTTTAGCCAGAAGTTAAAGCATATTGTTCGT
CTACCTTTTGCAGTTACTGCATATGGAACTGCTGCCCTTTTACTTGTCATGGTATGGGAACCTCAGATCAGTGCACTCTCGATCCCCATAATTTTAAGGATGATTATGTT
AATTGAAGCGGTATGTGCTGGATCGTTTATGATTATCTATATCAGTTATGTTCAAAAGTACAATTCATTAAATTCTCAGCCTGATGTTTTGAAGTCATTGTATTCTCCAC
TTCAGCAATCAAGTTCTTTGGAAGATCTAAGGTATCATGATGTTGGTCGACTTTCTGATCAGCAAATGGCTCTGTTGCAATATCAGCGAGAGAACCTTCATTTTCTGAAT
GAGGAGATTCTTCGGTTGCAAGAGTGCTTGAGTAAATATGAACGGTCCAGTGATGGAAGCACGCCTCAGGTTGATCTTGCCCATATGCTAGCTGCTCGTGATCAGGAATT
GAGGACACTTTCAGCTGAGATGAATCAGGTGACATCAGAACTTAGGCTTGCTCGATCTGTGATAGCCGAGAGGGATACCGAGATTCAGAAATTACTCACCACCAACAAGC
AGTATGTAGAAGAAAATGAAAGACTGAGAGCTATTCTAGGAGAATGGAGTACACGGGCTGCAAAGCTCGAGAGGGCGCTTGAAGCCGAGCGTATATCAAATCTTGAATTG
CAAAAGAGGATTTCAACACTAAAAAAGCTATCACATGCATCTGAAACATCAGAGCAGCAGGGGAGTTGA
mRNA sequenceShow/hide mRNA sequence
AAAACTCGTATGCTGAAATTAGTTGCAGAAGAATCAGTCTCTCTCCGGAGAAATCACCGATCGTCGGAATTGGAAAAGCCTAACTGACGGTTTCTAAAGCCTTCAGCACC
GCAATTCAGCCTCCAATTCTTGTTTCATCTCCGTTTAAGCCTCTACATTCCAAACATGGCAGCGGAGAGGCACGCCTCTTCGCGCGCAACATCATCTGAAGACAACGCGA
TTTCCTTCGTTGGACTGCTACAGGTTTCTTGATATACTGCATGAGGCCCCGTTATTTGGTCATCGGAAGCCTGCAAGAACAGTTGGGAGCATAATTTATTGTTTCGTTTT
GGCAAGCTATGCTGCTCTGGCTATTGGAGCGCCATGGATTTTTCGTCCTATAATGCACTTGGTTGAACCATTGCTCTGCAGTTGCGATGTCGTTCTCTTGATGCTCACAG
GATTAGAAATTTCATTTCAGTTCATTCTTAGGAATCAAGCTATTGAAATCGATCATTTAAGCACATCTTTAATCGTCTTGACATATCAAAAGGTTTTGATGAATAATTCA
ACCAAGAGGTATGATTATGAAATGATCTTTATACTTTTTTTAGAAGTTGAACCACTGTTTATTATTTCAGGTATATTTCAGCAATATCTAGTATACCAAGTCCAGAAAAT
TCGATTGCAGGGTTATTATAGCTTTAGCCAGAAGTTAAAGCATATTGTTCGTCTACCTTTTGCAGTTACTGCATATGGAACTGCTGCCCTTTTACTTGTCATGGTATGGG
AACCTCAGATCAGTGCACTCTCGATCCCCATAATTTTAAGGATGATTATGTTAATTGAAGCGGTATGTGCTGGATCGTTTATGATTATCTATATCAGTTATGTTCAAAAG
TACAATTCATTAAATTCTCAGCCTGATGTTTTGAAGTCATTGTATTCTCCACTTCAGCAATCAAGTTCTTTGGAAGATCTAAGGTATCATGATGTTGGTCGACTTTCTGA
TCAGCAAATGGCTCTGTTGCAATATCAGCGAGAGAACCTTCATTTTCTGAATGAGGAGATTCTTCGGTTGCAAGAGTGCTTGAGTAAATATGAACGGTCCAGTGATGGAA
GCACGCCTCAGGTTGATCTTGCCCATATGCTAGCTGCTCGTGATCAGGAATTGAGGACACTTTCAGCTGAGATGAATCAGGTGACATCAGAACTTAGGCTTGCTCGATCT
GTGATAGCCGAGAGGGATACCGAGATTCAGAAATTACTCACCACCAACAAGCAGTATGTAGAAGAAAATGAAAGACTGAGAGCTATTCTAGGAGAATGGAGTACACGGGC
TGCAAAGCTCGAGAGGGCGCTTGAAGCCGAGCGTATATCAAATCTTGAATTGCAAAAGAGGATTTCAACACTAAAAAAGCTATCACATGCATCTGAAACATCAGAGCAGC
AGGGGAGTTGAGTTGTAAAGCATCATCAGTTTAATCTCAAGGTTGGAACGGAAGTGCCGCCCTCAGCATAGGCTACATTTATATTCTCTTGAATATGAGCAGCAGCAGAT
GAGACCCGTTCTTTCTCGTGCATTCTGGCCTCCAATATCGACCAAATACCGGCAGTAGCTGTGTAAACAAATGAAGGTTCGTTTCTTTTTTTCCTTTTTGATCTTGGTAC
TAAAATTTGAATTTCTTTGATTGTACATCTACTTTTTTCTTTTGAGGTTCTCTTTTCTTTCGATGCATTTTGATTTTAATGCACTTCGAAGGGAGATGATAATGCACACT
CGTACTGGCATGGTGCATTTAGTTCTTTGAAGTCGACACACACTCGTGCTTGTCTGTTCTCTTGCGTACTAGCACGATGAGAACCAACATTTGCGATTCTCATATGATAG
AGAGAGGGGTTGAAGTACACATAAATGGTCGTCGATTTTTATCAAAATATGGCCTAGCTCTTGGTTCGATTACCATCCCGTTAAGGACAGGTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MHLVEPLLCSCDVVLLMLTGLEISFQFILRNQAIEIDHLSTSLIVLTYQKVLMNNSTKRYDYEMIFILFLEVEPLFIISGIFQQYLVYQVQKIRLQGYYSFSQKLKHIVR
LPFAVTAYGTAALLLVMVWEPQISALSIPIILRMIMLIEAVCAGSFMIIYISYVQKYNSLNSQPDVLKSLYSPLQQSSSLEDLRYHDVGRLSDQQMALLQYQRENLHFLN
EEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEMNQVTSELRLARSVIAERDTEIQKLLTTNKQYVEENERLRAILGEWSTRAAKLERALEAERISNLEL
QKRISTLKKLSHASETSEQQGS