; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg12971 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg12971
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRING-type E3 ubiquitin transferase
Genome locationCarg_Chr10:3479810..3480361
RNA-Seq ExpressionCarg12971
SyntenyCarg12971
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044675 - E3 ubiquitin-protein ligase RING1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590024.1 RING-H2 finger protein ATL1, partial [Cucurbita argyrosperma subsp. sororia]3.1e-98100Show/hide
Query:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAAA
        MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAAA
Subjt:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAAA

Query:  EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV
        EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV
Subjt:  EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV

XP_022960602.1 E3 ubiquitin-protein ligase EL5-like [Cucurbita moschata]1.1e-9598.91Show/hide
Query:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAAA
        MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAA  AAA
Subjt:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAAA

Query:  EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV
        EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV
Subjt:  EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV

XP_022968369.1 RING-H2 finger protein ATL52-like [Cucurbita maxima]5.3e-7479.57Show/hide
Query:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAAA
        M DSAS + AQPTSHPAKSSLPMLYYGLVVIGTA IVLVLYN I+I WCSDN  G+ASPALAGSYAEMVNSSRS QSSNRNLL SFKFKKGS A ATA  
Subjt:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAAA

Query:  EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQT---AAEQQGNSGHGLPESGGLV
        EEEG GNEC VCLSAFE+GEEVKKLPRC HMFHA CIDMWL+SH DCPLCRAP   P L +R T   AAEQQ NSGHGL ES  LV
Subjt:  EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQT---AAEQQGNSGHGLPESGGLV

XP_022987479.1 E3 ubiquitin-protein ligase EL5-like [Cucurbita maxima]9.6e-9295.08Show/hide
Query:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAAA
        MSDSASN+F+QPT+HPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAA   AA 
Subjt:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAAA

Query:  EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV
        EEEGNGNECVVCLSAFEEGEEVKKLPRC+HMFHA CIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV
Subjt:  EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV

XP_023516728.1 E3 ubiquitin-protein ligase EL5-like [Cucurbita pepo subsp. pepo]3.0e-9396.2Show/hide
Query:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAA-
        MSDSASNYFAQPT+HPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAG+YAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAA AA 
Subjt:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAA-

Query:  AEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV
         EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHA CIDMWLFSHCDCPLCRAPVAVPGLSKRQT AEQQGNSGHGLPESGGLV
Subjt:  AEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV

TrEMBL top hitse value%identityAlignment
A0A6J1D0Z7 RING-type E3 ubiquitin transferase2.1e-6877.6Show/hide
Query:  SDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAAAE
        S S+S  F QPT HPAKSSLPMLYYGLVV+GTAAIVLV+YNFIVI WCSD RRGR SP +A SYAEM++SS S QSS+RNLL SF+FKKG+ AAA A AE
Subjt:  SDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAAAE

Query:  EEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAV-PGLSKRQTAAEQQGNSGHGLPESGGLV
        EEGNG EC VCLSAFE+GEEVKKLPRC HMFHA CIDMWL+SH DCPLCRAPVA+ PGL +  TAAEQ  NSGHGL ESGGLV
Subjt:  EEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAV-PGLSKRQTAAEQQGNSGHGLPESGGLV

A0A6J1EGS5 RING-type E3 ubiquitin transferase6.7e-6780.24Show/hide
Query:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGS--AAAATA
        M DSAS + AQPTSHPAKSSLPMLYYGLVVIGTA IVLVLYN I+I WCSD+  G+AS ALAGSYAEMVNSSRS QSSNRNLL SFKFKKGS   AAATA
Subjt:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGS--AAAATA

Query:  AAEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTA
          EEEG GNEC VCLSAFE+GEEVKKLPRC HMFHA CIDMWL+SH DCPLCRAPV  P L +R TA
Subjt:  AAEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTA

A0A6J1H7W2 RING-type E3 ubiquitin transferase5.3e-9698.91Show/hide
Query:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAAA
        MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAA  AAA
Subjt:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAAA

Query:  EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV
        EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV
Subjt:  EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV

A0A6J1HZG2 RING-type E3 ubiquitin transferase2.6e-7479.57Show/hide
Query:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAAA
        M DSAS + AQPTSHPAKSSLPMLYYGLVVIGTA IVLVLYN I+I WCSDN  G+ASPALAGSYAEMVNSSRS QSSNRNLL SFKFKKGS A ATA  
Subjt:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAAA

Query:  EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQT---AAEQQGNSGHGLPESGGLV
        EEEG GNEC VCLSAFE+GEEVKKLPRC HMFHA CIDMWL+SH DCPLCRAP   P L +R T   AAEQQ NSGHGL ES  LV
Subjt:  EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQT---AAEQQGNSGHGLPESGGLV

A0A6J1JJ05 RING-type E3 ubiquitin transferase4.6e-9295.08Show/hide
Query:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAAA
        MSDSASN+F+QPT+HPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAA   AA 
Subjt:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAAA

Query:  EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV
        EEEGNGNECVVCLSAFEEGEEVKKLPRC+HMFHA CIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV
Subjt:  EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV

SwissProt top hitse value%identityAlignment
P0C041 Putative RING-H2 finger protein ATL531.0e-1133.33Show/hide
Query:  SHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEM-VNSSR--------SLQSSNRNLLCSFKFKKGSAAAATAAAEEEG
        S+P  S L +  +G   I   A +L  Y  +V  +C+++    A+     S   + VNS          +L+SS   L  +   K G           + 
Subjt:  SHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEM-VNSSR--------SLQSSNRNLLCSFKFKKGSAAAATAAAEEEG

Query:  NGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVP
        NG +C +CL  F E E ++ LP+C H FH  CID WL SH +CPLCRA + VP
Subjt:  NGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVP

P93823 RING-H2 finger protein ATL11.4e-1333.77Show/hide
Query:  PTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSD-------NRRGRAS---PALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAAAE
        P +  + ++ P+L   ++ I   A +LV Y   VI  C +        RR R+S   P +  S  E+   +R L  S    +  FKFKK    A     +
Subjt:  PTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSD-------NRRGRAS---PALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAAAE

Query:  EEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVA
        +  N  EC VCL+ F+E E+++ +P C H+FH  CID+WL  + +CPLCR  V+
Subjt:  EEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVA

Q9LF64 RING-H2 finger protein ATL522.0e-1532.07Show/hide
Query:  NYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPAL------AGSYAEMVNSSRSLQSSNRNLLCS---FKFKKGSAAAAT
        ++F    S  + SS   L   L+ I T+A++LV Y  ++  +C  + +  +S  L       G ++     S +    N +++ S   +K+K G      
Subjt:  NYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPAL------AGSYAEMVNSSRSLQSSNRNLLCS---FKFKKGSAAAAT

Query:  AAAEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRA-------PVAVPGLSKRQTAAEQQGNSGH
               +G++C VCLS FEE E ++ LP+C H FH  CID WL SH +CPLCRA       P A  G +     A  Q NS H
Subjt:  AAAEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRA-------PVAVPGLSKRQTAAEQQGNSGH

Q9LRB7 E3 ubiquitin-protein ligase EL54.0e-1634.88Show/hide
Query:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIV---LVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSN------------RNLLCS
        M +S+S+    P S PA     M   G+  +    IV   L L   ++  +C + RR   + + +G         RS    +            R+L  +
Subjt:  MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIV---LVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSN------------RNLLCS

Query:  FKFKKGSAAAATAAAEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVP
           +  +AAAA    EE+ +G EC VCL+  E+GEE + LPRC H FHA C+DMWL SH  CPLCR  V VP
Subjt:  FKFKKGSAAAATAAAEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVP

Q9LSW9 RING-H2 finger protein ATL162.1e-1234.34Show/hide
Query:  PTSHPAKS---SLPMLYYGLVVIGTAAIVLVLYNFIVIMWC--------------SDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKK----
        P  H A S   S P+L   ++ I   A +LV Y   VI  C              S  RR    P +  S  E+   SR L  S    +  FKFKK    
Subjt:  PTSHPAKS---SLPMLYYGLVVIGTAAIVLVLYNFIVIMWC--------------SDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKK----

Query:  -GSAAAATAAAEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVA
                   EEE    EC VCLS F++ E+++ +P C H+FH  CID+WL ++ +CPLCR  V+
Subjt:  -GSAAAATAAAEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVA

Arabidopsis top hitse value%identityAlignment
AT1G04360.1 RING/U-box superfamily protein1.0e-1433.77Show/hide
Query:  PTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSD-------NRRGRAS---PALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAAAE
        P +  + ++ P+L   ++ I   A +LV Y   VI  C +        RR R+S   P +  S  E+   +R L  S    +  FKFKK    A     +
Subjt:  PTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSD-------NRRGRAS---PALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAAAE

Query:  EEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVA
        +  N  EC VCL+ F+E E+++ +P C H+FH  CID+WL  + +CPLCR  V+
Subjt:  EEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVA

AT4G17905.1 RING/U-box superfamily protein7.2e-1333.33Show/hide
Query:  SHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEM-VNSSR--------SLQSSNRNLLCSFKFKKGSAAAATAAAEEEG
        S+P  S L +  +G   I   A +L  Y  +V  +C+++    A+     S   + VNS          +L+SS   L  +   K G           + 
Subjt:  SHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEM-VNSSR--------SLQSSNRNLLCSFKFKKGSAAAATAAAEEEG

Query:  NGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVP
        NG +C +CL  F E E ++ LP+C H FH  CID WL SH +CPLCRA + VP
Subjt:  NGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVP

AT4G33565.1 RING/U-box superfamily protein1.1e-1361.22Show/hide
Query:  GNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPV
        G +C VCLS FEE E ++ LP+C H FH  CID WL SH +CPLCRAP+
Subjt:  GNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPV

AT5G17600.1 RING/U-box superfamily protein1.4e-1632.07Show/hide
Query:  NYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPAL------AGSYAEMVNSSRSLQSSNRNLLCS---FKFKKGSAAAAT
        ++F    S  + SS   L   L+ I T+A++LV Y  ++  +C  + +  +S  L       G ++     S +    N +++ S   +K+K G      
Subjt:  NYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPAL------AGSYAEMVNSSRSLQSSNRNLLCS---FKFKKGSAAAAT

Query:  AAAEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRA-------PVAVPGLSKRQTAAEQQGNSGH
               +G++C VCLS FEE E ++ LP+C H FH  CID WL SH +CPLCRA       P A  G +     A  Q NS H
Subjt:  AAAEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRA-------PVAVPGLSKRQTAAEQQGNSGH

AT5G43420.1 RING/U-box superfamily protein1.5e-1334.34Show/hide
Query:  PTSHPAKS---SLPMLYYGLVVIGTAAIVLVLYNFIVIMWC--------------SDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKK----
        P  H A S   S P+L   ++ I   A +LV Y   VI  C              S  RR    P +  S  E+   SR L  S    +  FKFKK    
Subjt:  PTSHPAKS---SLPMLYYGLVVIGTAAIVLVLYNFIVIMWC--------------SDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKK----

Query:  -GSAAAATAAAEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVA
                   EEE    EC VCLS F++ E+++ +P C H+FH  CID+WL ++ +CPLCR  V+
Subjt:  -GSAAAATAAAEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGATTCTGCTTCAAATTATTTTGCTCAACCAACGTCTCATCCAGCAAAATCAAGCCTACCCATGTTGTATTACGGCCTTGTGGTAATCGGAACGGCGGCGATTGT
GTTAGTTCTTTACAATTTCATCGTTATCATGTGGTGTTCCGACAACCGTCGTGGCCGAGCTTCGCCGGCGCTGGCTGGAAGTTATGCGGAGATGGTGAATTCAAGCCGTA
GCTTGCAGAGCTCAAATAGGAATTTGTTGTGCAGCTTTAAGTTCAAGAAGGGGTCTGCAGCGGCGGCGACGGCGGCGGCCGAAGAAGAAGGGAATGGGAATGAATGTGTG
GTTTGTTTGTCGGCGTTTGAGGAGGGGGAAGAGGTTAAGAAACTGCCGAGATGTATGCATATGTTTCATGCTTGTTGTATAGATATGTGGCTTTTTTCTCACTGTGATTG
CCCCCTCTGCCGTGCTCCGGTGGCGGTGCCGGGGTTGAGCAAACGCCAAACCGCGGCGGAGCAACAGGGGAATTCAGGGCATGGGTTGCCGGAATCCGGTGGCTTGGTTT
GA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGATTCTGCTTCAAATTATTTTGCTCAACCAACGTCTCATCCAGCAAAATCAAGCCTACCCATGTTGTATTACGGCCTTGTGGTAATCGGAACGGCGGCGATTGT
GTTAGTTCTTTACAATTTCATCGTTATCATGTGGTGTTCCGACAACCGTCGTGGCCGAGCTTCGCCGGCGCTGGCTGGAAGTTATGCGGAGATGGTGAATTCAAGCCGTA
GCTTGCAGAGCTCAAATAGGAATTTGTTGTGCAGCTTTAAGTTCAAGAAGGGGTCTGCAGCGGCGGCGACGGCGGCGGCCGAAGAAGAAGGGAATGGGAATGAATGTGTG
GTTTGTTTGTCGGCGTTTGAGGAGGGGGAAGAGGTTAAGAAACTGCCGAGATGTATGCATATGTTTCATGCTTGTTGTATAGATATGTGGCTTTTTTCTCACTGTGATTG
CCCCCTCTGCCGTGCTCCGGTGGCGGTGCCGGGGTTGAGCAAACGCCAAACCGCGGCGGAGCAACAGGGGAATTCAGGGCATGGGTTGCCGGAATCCGGTGGCTTGGTTT
GA
Protein sequenceShow/hide protein sequence
MSDSASNYFAQPTSHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGSYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAATAAAEEEGNGNECV
VCLSAFEEGEEVKKLPRCMHMFHACCIDMWLFSHCDCPLCRAPVAVPGLSKRQTAAEQQGNSGHGLPESGGLV