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Carg13003 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13003
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPrenylated rab acceptor PRA1
Genome locationCarg_Chr10:3270519..3270995
RNA-Seq ExpressionCarg13003
SyntenyCarg13003
Gene Ontology termsGO:0016192 - vesicle-mediated transport (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR037759 - Uncharacterized protein At4g29660-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589991.1 hypothetical protein SDJN03_15414, partial [Cucurbita argyrosperma subsp. sororia]3.7e-27100Show/hide
Query:  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
        MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
Subjt:  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
KAG7023654.1 hypothetical protein SDJN02_14680 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-27100Show/hide
Query:  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYKV
        MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYKV
Subjt:  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYKV
XP_012076909.1 uncharacterized protein At4g29660 [Jatropha curcas]4.0e-2693.44Show/hide
Query:  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
        MASYLWRKYA+YLYTKWERTILWDM+DPYRRPKSFTPLVTIYIAAFYTGV+G+AITEQLYK
Subjt:  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
XP_022961093.1 uncharacterized protein At4g29660 [Cucurbita moschata]3.7e-27100Show/hide
Query:  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
        MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
Subjt:  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
XP_038878275.1 uncharacterized protein At4g29660 [Benincasa hispida]2.4e-2696.72Show/hide
Query:  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
        MASYLWRKYADY+YTKWERTILWDMVDPYRRPKSFTPLV+IYIAAFYTGVVGAAITEQLYK
Subjt:  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
TrEMBL top hitse value%identityAlignment
A0A067KFR3 Uncharacterized protein2.0e-2693.44Show/hide
Query:  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
        MASYLWRKYA+YLYTKWERTILWDM+DPYRRPKSFTPLVTIYIAAFYTGV+G+AITEQLYK
Subjt:  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
A0A1S3BPK6 uncharacterized protein At4g296602.6e-2693.44Show/hide
Query:  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
        MASYLWRKYADYLYTKWE+T+LWDM+DPYRRPKSFTPLV+IYIAAFYTGVVGAAITEQLYK
Subjt:  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
A0A6J1D1D0 uncharacterized protein At4g296603.3e-2695.08Show/hide
Query:  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
        MASYLWRKYADY+YTKWERTILWDMVDPYRRPKSFTPLV+IYIAAFY+GVVGAAITEQLYK
Subjt:  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
A0A6J1HAW0 uncharacterized protein At4g296601.8e-27100Show/hide
Query:  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
        MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
Subjt:  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
A0A6J1JKR6 uncharacterized protein At4g296601.8e-27100Show/hide
Query:  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
        MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
Subjt:  MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
SwissProt top hitse value%identityAlignment
Q94K18 Uncharacterized protein At4g296604.1e-2172.88Show/hide
Query:  SYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
        S LWRKYADY Y K+ER  +W+M++PYRRPK+FT L+TIY+AAFYTGV+GAA+TEQLYK
Subjt:  SYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
Arabidopsis top hitse value%identityAlignment
AT4G29660.1 embryo defective 27522.9e-2272.88Show/hide
Query:  SYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK
        S LWRKYADY Y K+ER  +W+M++PYRRPK+FT L+TIY+AAFYTGV+GAA+TEQLYK
Subjt:  SYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCTATCTATGGAGGAAGTACGCCGATTATCTCTACACCAAGTGGGAAAGAACGATTCTATGGGACATGGTTGATCCGTATAGGCGACCTAAATCGTTTACGCC
TTTGGTTACCATCTATATTGCTGCCTTTTACACTGGAGTCGTCGGCGCTGCCATTACCGAGCAGCTATACAAGGTTTAA
mRNA sequenceShow/hide mRNA sequence
AACCTCTTCATTGCACCGCAACTCACTAACCGCCGATTCTGGAACTGTTTTCGATTCCAATCTTAATTCGTCTCTTTCCAGTAGCCTTGTATTCGACGAATCAATCGCCG
GTTGTGCTCGAAATGGCGAGCTATCTATGGAGGAAGTACGCCGATTATCTCTACACCAAGTGGGAAAGAACGATTCTATGGGACATGGTTGATCCGTATAGGCGACCTAA
ATCGTTTACGCCTTTGGTTACCATCTATATTGCTGCCTTTTACACTGGAGTCGTCGGCGCTGCCATTACCGAGCAGCTATACAAGGTTTAA
Protein sequenceShow/hide protein sequence
MASYLWRKYADYLYTKWERTILWDMVDPYRRPKSFTPLVTIYIAAFYTGVVGAAITEQLYKV