CuGenDBv2

Gene ID	Carg13018
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Genome location	Carg_Chr10:3188927..3192716
RNA-Seq Expression	Carg13018
Synteny	Carg13018
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6589974.1 hypothetical protein SDJN03_15397, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-77

73.64

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Query:  MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIVQQ
        MAIKRLGRIWMKS KDAASLPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWR                     TVFAAFLFCFVAFLLYSIVQQ
Subjt:  MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIVQQ

Query:  VSSPFEL------------------------------------SSYQRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLL
        VSSPFEL                                    SSYQRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLL
Subjt:  VSSPFEL------------------------------------SSYQRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLL

Query:  AESSEEIRKLRGYMYSYKAS
        AESSEEIRKLRGYMYSYKAS
Subjt:  AESSEEIRKLRGYMYSYKAS

KAG7023638.1 hypothetical protein SDJN02_14664 [Cucurbita argyrosperma subsp. argyrosperma]

3.7e-99

100

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Query:  MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIVQQ
        MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIVQQ
Subjt:  MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIVQQ

Query:  VSSPFELSSYQRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAS
        VSSPFELSSYQRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAS
Subjt:  VSSPFELSSYQRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAS

XP_022960854.1 uncharacterized protein LOC111461536 isoform X2 [Cucurbita moschata]

6.7e-77

72.27

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Query:  MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIVQQ
        MAIKRLGRIWMKSGKDAAS PSRDDPSFDDFCPIDSQVQE+MVRSFERANDQQSLLWR                     TVFAAFLFCFVAFLLYSIVQQ
Subjt:  MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIVQQ

Query:  VSSPFEL------------------------------------SSYQRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLL
        VSSPFEL                                    SSYQRRWLWCSFF+SILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLL
Subjt:  VSSPFEL------------------------------------SSYQRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLL

Query:  AESSEEIRKLRGYMYSYKAS
        AESSEEIRKLRGYMYSYKA+
Subjt:  AESSEEIRKLRGYMYSYKAS

XP_022987865.1 uncharacterized protein LOC111485278 isoform X2 [Cucurbita maxima]

4.8e-75

70.91

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Query:  MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIVQQ
        MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQE+MVRSFERANDQQSLLWR                     TVFAAFLFCFVAFLLYSIVQQ
Subjt:  MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIVQQ

Query:  VSSPFEL------------------------------------SSYQRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLL
        VSSPFEL                                    S+Y RRWLWCSFFISILLSVFWLYFMMRLPRFRW+VIWRPFGPLS AGICLYVDHLL
Subjt:  VSSPFEL------------------------------------SSYQRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLL

Query:  AESSEEIRKLRGYMYSYKAS
        AESSEEIRKLRGYMY+YKA+
Subjt:  AESSEEIRKLRGYMYSYKAS

XP_023516764.1 uncharacterized protein LOC111780569 isoform X2 [Cucurbita pepo subsp. pepo]

4.8e-75

70.45

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Query:  MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIVQQ
        MAIKRLGRIWMKSGKDAAS+PSRDDPSFDDFCPIDSQVQE+MVRSFERANDQQSLLWR                     TVFAAFLFCFVAFLLYSIVQQ
Subjt:  MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIVQQ

Query:  VSSPFEL------------------------------------SSYQRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLL
        VSSPFEL                                    S+Y RRWLWCSFFISILLSVFWLYFMMRLPRFRW+VIWRP GPLSG GICLYVDHLL
Subjt:  VSSPFEL------------------------------------SSYQRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLL

Query:  AESSEEIRKLRGYMYSYKAS
        AESSEEIRKLRGYMYSYKA+
Subjt:  AESSEEIRKLRGYMYSYKAS

TrEMBL top hits

e value

%identity

Alignment

A0A6J1EIP3 uncharacterized protein LOC111434892

2.0e-63

61.82

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Query:  MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIVQQ
        MAIK+L R+ MKS +D  SLP+RDDPS DD  PIDSQ QE+MVRSFERANDQQSLLWR                     TVFAAFLFCF  FLLYSI+ Q
Subjt:  MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIVQQ

Query:  VSSPFEL------------------------------------SSYQRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLL
        VSSP+EL                                    S+Y RRWLWCSFFI  LLSVFWLYFM+ LPRFRW+VIWRPFGPLSGAGICLYVDHLL
Subjt:  VSSPFEL------------------------------------SSYQRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLL

Query:  AESSEEIRKLRGYMYSYKAS
        AESSEEIRKLRGYMYSYKA+
Subjt:  AESSEEIRKLRGYMYSYKAS

A0A6J1HAA3 uncharacterized protein LOC111461536 isoform X3

2.6e-66

74.46

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Query:  MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIVQQ
        MAIKRLGRIWMKSGKDAAS PSRDDPSFDDFCPIDSQVQE+MVRSFERANDQQSLLWR            +     V   +  A  +  +    +SI+  
Subjt:  MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIVQQ

Query:  VSSPFELSSYQRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAS
        VS     SSYQRRWLWCSFF+SILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKA+
Subjt:  VSSPFELSSYQRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAS

A0A6J1HCB3 uncharacterized protein LOC111461536 isoform X2

3.2e-77

72.27

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Query:  MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIVQQ
        MAIKRLGRIWMKSGKDAAS PSRDDPSFDDFCPIDSQVQE+MVRSFERANDQQSLLWR                     TVFAAFLFCFVAFLLYSIVQQ
Subjt:  MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIVQQ

Query:  VSSPFEL------------------------------------SSYQRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLL
        VSSPFEL                                    SSYQRRWLWCSFF+SILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLL
Subjt:  VSSPFEL------------------------------------SSYQRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLL

Query:  AESSEEIRKLRGYMYSYKAS
        AESSEEIRKLRGYMYSYKA+
Subjt:  AESSEEIRKLRGYMYSYKAS

A0A6J1JFJ9 uncharacterized protein LOC111485278 isoform X3

6.3e-65

72.83

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Query:  MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIVQQ
        MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQE+MVRSFERANDQQSLLWR      +           V   +  A  +  +    +SI+  
Subjt:  MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIVQQ

Query:  VSSPFELSSYQRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAS
        VS     S+Y RRWLWCSFFISILLSVFWLYFMMRLPRFRW+VIWRPFGPLS AGICLYVDHLLAESSEEIRKLRGYMY+YKA+
Subjt:  VSSPFELSSYQRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAS

A0A6J1JI02 uncharacterized protein LOC111485278 isoform X2

2.3e-75

70.91

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Query:  MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIVQQ
        MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQE+MVRSFERANDQQSLLWR                     TVFAAFLFCFVAFLLYSIVQQ
Subjt:  MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIVQQ

Query:  VSSPFEL------------------------------------SSYQRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLL
        VSSPFEL                                    S+Y RRWLWCSFFISILLSVFWLYFMMRLPRFRW+VIWRPFGPLS AGICLYVDHLL
Subjt:  VSSPFEL------------------------------------SSYQRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLL

Query:  AESSEEIRKLRGYMYSYKAS
        AESSEEIRKLRGYMY+YKA+
Subjt:  AESSEEIRKLRGYMYSYKAS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G26240.1 unknown protein

8.5e-38

41.18

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Query:  IKRLGRIWMKSGKDAAS----LPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIV
        +K+L R W ++ +D       LP+ +D    D  PID+Q QE+ VR  E A+ QQSL WR                     +VF   L CF AFL YSI 
Subjt:  IKRLGRIWMKSGKDAAS----LPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIV

Query:  QQVSSPFELSSY------------------------------------QRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDH
        QQ  SP+EL  +                                     RRW W S  +   L++FWLY+++RLP+FRW+ IW PFGPL GAGICLYVDH
Subjt:  QQVSSPFELSSY------------------------------------QRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDH

Query:  LLAESSEEIRKLRGYMYSYKA
        LL ESSEE++KLR YMY+YKA
Subjt:  LLAESSEEIRKLRGYMYSYKA

Sequences

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CDS sequence

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ATGGCTATCAAGAGATTAGGTAGAATTTGGATGAAATCGGGGAAAGATGCGGCGTCGCTTCCGTCTCGGGATGATCCGTCCTTCGACGATTTCTGTCCCATTGACAGCCA
AGTGCAAGAGAAGATGGTTCGTTCGTTCGAAAGGGCAAATGATCAACAGAGTCTTCTATGGAGGGTATCTGGAGGATTAGGGATTCTCATGTCGATTGTTCTTCTCTGTG
GATCGACTGTTCGTCAGACTGTGTTTGCGGCATTTCTTTTTTGCTTTGTGGCTTTTCTTCTTTACTCAATCGTTCAGCAGGTTTCTTCTCCATTTGAACTGTCAAGTTAC
CAACGGCGATGGCTTTGGTGCTCATTCTTTATCAGCATCCTACTCTCAGTTTTCTGGTTATATTTCATGATGAGATTGCCTAGATTTCGATGGGAGGTTATCTGGCGTCC
CTTTGGTCCTCTCAGTGGGGCTGGAATCTGTTTGTATGTTGATCATCTGCTGGCCGAGTCGTCCGAGGAAATAAGAAAACTTAGAGGTTATATGTATTCTTATAAAGCTT
CCTGA

mRNA sequence

Show/hide mRNA sequence

ACCTAAGGCTAAAGCATGGCATTTGCGTTTCGTGGATGACGATGGCAGAGGCTCAATCTTCAGGTTCCCGCTATTGGACTTCAATATTGGCATTCTTCCGCGAAGAGAAC
GCAGAGCCAGATCGCGGCGTGCGACGTTGAGTTGAAGATGGCTATCAAGAGATTAGGTAGAATTTGGATGAAATCGGGGAAAGATGCGGCGTCGCTTCCGTCTCGGGATG
ATCCGTCCTTCGACGATTTCTGTCCCATTGACAGCCAAGTGCAAGAGAAGATGGTTCGTTCGTTCGAAAGGGCAAATGATCAACAGAGTCTTCTATGGAGGGTATCTGGA
GGATTAGGGATTCTCATGTCGATTGTTCTTCTCTGTGGATCGACTGTTCGTCAGACTGTGTTTGCGGCATTTCTTTTTTGCTTTGTGGCTTTTCTTCTTTACTCAATCGT
TCAGCAGGTTTCTTCTCCATTTGAACTGTCAAGTTACCAACGGCGATGGCTTTGGTGCTCATTCTTTATCAGCATCCTACTCTCAGTTTTCTGGTTATATTTCATGATGA
GATTGCCTAGATTTCGATGGGAGGTTATCTGGCGTCCCTTTGGTCCTCTCAGTGGGGCTGGAATCTGTTTGTATGTTGATCATCTGCTGGCCGAGTCGTCCGAGGAAATA
AGAAAACTTAGAGGTTATATGTATTCTTATAAAGCTTCCTGAAAATTGCATGAACCTCGTATAATTCATGCATTTCCTTCCCTGAAGAAACTATATCTGGAGTTCATTTT
TTGACCCGAACAAGCTCGAGTTTTATAATGATTTACTATCAAGGTTCATCCTGTTCGAGTTTTATAATGATTTACTATCAAGGTTCATCCTTAAAAGAGAAGCAAGTTCA
ATAGTGAAAGGTAAAATTGATACTACAACGATAACCATTGCAAGCACAACTATAAATTATAAAAAGAAAAGAAAAATAAAAAAGCTGATTAGAAATGTACCGAAGGATGA
GACAATGAAGAACTCGAGTCTTTTACCAAAAATGTTGCCAAAAGTTGGAAATAACTGATAAAAAGGCAAATGGGTATGTGAAATCAATCTTCTTCATCGATGACCTTAGT
GCCCAATCCTTTCAAACCTTCTGCTGGGATTTCTGCAACAGTAACAAGCGAATACAGTTCTTCCTTTGCATCTTCATCGTCGTTCCTCTTGCGTGCAATACGAACTCTAA
TCCTCCTTGGAACACTTCGAATTCCTCTGCTCCAGATATGCTTGTTCAGTTTCACGTCCACCCTGACGTCCTTCGTTCCCATTGCTTTCTCTGCAAACTTCCTTATCTCC
TTGATGGCCTTAGGCGCCTTCTTCTTGAAGGTGCTGTCATTTAAAGTTTCAGCAAACATGAGAACTATGCAGTTGCTACAGTAGCAATATTGTAGACGAATTCGGGATTC
AAATTGGACGCGAAAGGGGAAAACGATTGGAATTAGACTACTGATACAATGAAGGGGGAAACAAAAAACATACAAACACAAAAAATACTAGACTATAAATTACAAATGAA
AAGTTGCGTAGAAACACAGAAGAAACAGCACATAAACCATCCACCAGACTGCTAGTCCAATATTTCACACTGCATAACAAACTGCCCATATTTCATCTCCTTAGTAGTTC
CATTGACCTTCTGTCTTATAAACTTGCATAAAAATTCTCCAAAACCTTGCTTTCATTACTCTTATTAATCTCGTCTACATCTTCAATATCCAAAACAGAGATTATACTAC
CAGTGCATTCTACATTTCTTAGATCAGCTGATACGTGTTCTTAATGAAATTCCACGATGAAATTTATCCTTTATTTCCTAACTCTTATCTTATACAAGCTTCACAATCAA
CATAGTCTTGATATATGTATACAAATAAACCACGTTAACTTACCATGCCAAGTAATCTTATAATTTAATTCACGAAAAACAAAAAAAAAGGTCTCATAACGAACAAATTA
GTTTCAAAGCATAAGAAATTGAAAATCTCTAGCCATAGATATTGGACGAACATCAAACAGTAGCTTAATAAATTAACTGAGCGGGAGATGGCATCTGTTAATATCGATGA
ATGAGATAAACTACGCAATCAAACGTTATGGAAACCAGAAGGAAAAATTATGAACGAGTTTGTACCAGCCATGCAAACGCTTGTGTAGATTGATGGTGTACTCTCTTGAG
ACCACCTCTTCCTTCCTCCCCTTCGTTTTCTCAACCATATCTGCAGTCGGCTACTTCGATTTTACCT

Protein sequence

Show/hide protein sequence

MAIKRLGRIWMKSGKDAASLPSRDDPSFDDFCPIDSQVQEKMVRSFERANDQQSLLWRVSGGLGILMSIVLLCGSTVRQTVFAAFLFCFVAFLLYSIVQQVSSPFELSSY
QRRWLWCSFFISILLSVFWLYFMMRLPRFRWEVIWRPFGPLSGAGICLYVDHLLAESSEEIRKLRGYMYSYKAS

Carg13018 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome