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Carg13030 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13030
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionnudix hydrolase 8-like
Genome locationCarg_Chr10:3133181..3134435
RNA-Seq ExpressionCarg13030
SyntenyCarg13030
Gene Ontology termsNA
InterPro domainsIPR003293 - Nudix hydrolase 6-like
IPR040618 - Pre-nudix hydrolase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7147629.1 hypothetical protein RHSIM_Rhsim03G0235800 [Rhododendron simsii]1.3e-1858.97Show/hide
Query:  SFQSWP-KGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL
        S  +W  KGKRG+WLK+  EQAE+V +AI EGFNYHHAE+GY MLT+WIPD   ML +  SH  G+A F++ND +E L
Subjt:  SFQSWP-KGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL

KAF9602094.1 hypothetical protein IFM89_024861 [Coptis chinensis]1.3e-1860.56Show/hide
Query:  KGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL
        KGK+G+WL++ TEQA++V +AI EGF+YHHAE GY MLT+WIPD   +L    SHH GV AF+IN+N+E L
Subjt:  KGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL

KAG6589965.1 Nudix hydrolase 8, partial [Cucurbita argyrosperma subsp. sororia]3.4e-2472.15Show/hide
Query:  KGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEALPPCGLLRT
        +GK+G        +  +    +  GFNYHHAEAGYAMLTFWIPDL SMLSSDSSHHFGVAAFLINDNKEALPPCGLLRT
Subjt:  KGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEALPPCGLLRT

KAG7023627.1 Nudix hydrolase 8, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-49100Show/hide
Query:  MRFPLTRRWTSFQSWPKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEALPPCGLLRT
        MRFPLTRRWTSFQSWPKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEALPPCGLLRT
Subjt:  MRFPLTRRWTSFQSWPKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEALPPCGLLRT

XP_022145002.1 nudix hydrolase 8-like [Momordica charantia]2.2e-2367.06Show/hide
Query:  FPLTRRWTSFQSWPKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL
        F    R + FQ   KGK+G+WLKL TEQA +V +AINEGFNYH+AEAGY MLT+WIPDL  ML S  SHH GVA FLINDNKE L
Subjt:  FPLTRRWTSFQSWPKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL

TrEMBL top hitse value%identityAlignment
A0A068U6L1 Nudix hydrolase domain-containing protein1.8e-1857.69Show/hide
Query:  SFQSW-PKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL
        S  +W  KGK+G+WLKL  EQ+E+V +AI EGF+YHHAE GY MLT+WIPD   ML +  SH  G+A F+IND++E L
Subjt:  SFQSW-PKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL

A0A6A4LU00 Nudix hydrolase domain-containing protein (Fragment)6.1e-1958.97Show/hide
Query:  SFQSWP-KGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL
        S  +W  KGKRG+WLK+  EQAE+V +AI EGFNYHHAE+GY MLT+WIPD   ML +  SH  G+A F++ND +E L
Subjt:  SFQSWP-KGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL

A0A6J1CVA2 nudix hydrolase 8-like1.1e-2367.06Show/hide
Query:  FPLTRRWTSFQSWPKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL
        F    R + FQ   KGK+G+WLKL TEQA +V +AINEGFNYH+AEAGY MLT+WIPDL  ML S  SHH GVA FLINDNKE L
Subjt:  FPLTRRWTSFQSWPKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL

A0A6P6SHD6 nudix hydrolase 8-like1.8e-1857.69Show/hide
Query:  SFQSW-PKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL
        S  +W  KGK+G+WLKL  EQ+E+V +AI EGF+YHHAE GY MLT+WIPD   ML +  SH  G+A F+IND++E L
Subjt:  SFQSW-PKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL

A0A6P6STF6 nudix hydrolase 8-like1.0e-1857.69Show/hide
Query:  SFQSW-PKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL
        S  +W  KGK+G+WLKL  EQ+++V +AI EGF+YHHAE GY MLT+WIPD   ML +  SH  G+A F+INDN+E L
Subjt:  SFQSW-PKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL

SwissProt top hitse value%identityAlignment
Q6NPD7 Nudix hydrolase 109.6e-1444.74Show/hide
Query:  SFQSWP-KGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKE
        SF+ W  +GK+G+WL L      +V  A+ EGF YHHAE  Y ML +WIP+  S +  ++SH   V A ++N NKE
Subjt:  SFQSWP-KGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKE

Q8L7W2 Nudix hydrolase 84.5e-1955.7Show/hide
Query:  SFQSW-PKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLS-SMLSSDSSHHFGVAAFLINDNKEAL
        S   W  KGK+G+WLKL  EQ+E+V +AI EGF YHHAE GY MLT+WIP+   SML +++SH  GV  F++N +KE L
Subjt:  SFQSW-PKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLS-SMLSSDSSHHFGVAAFLINDNKEAL

Q94B74 Nudix hydrolase 25.7e-1443.04Show/hide
Query:  TSFQSWP-KGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL
        +S  +W  +GK+G+W+KL  +   +   A+ EGF +HHAE  Y ML +WIP     L +++SH  G+ AF+IN NKE L
Subjt:  TSFQSWP-KGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL

Q9SJC6 Nudix hydrolase 54.6e-1647.44Show/hide
Query:  SFQSW-PKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL
        S ++W  +GK+G+W+KL +E + +V  AI +GF YHHAE  Y MLTFW+P+  S L  ++SH  G+ AF++N N E L
Subjt:  SFQSW-PKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL

Q9SU14 Nudix hydrolase 72.0e-1143.04Show/hide
Query:  SFQSW-PKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDN-KEAL
        S   W  +GK+G+W+KL    A +V  A++EGF YHHAE  Y ML  WI +    + +++SH  G  A +IN N KE L
Subjt:  SFQSW-PKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDN-KEAL

Arabidopsis top hitse value%identityAlignment
AT2G04430.1 nudix hydrolase homolog 53.3e-1747.44Show/hide
Query:  SFQSW-PKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL
        S ++W  +GK+G+W+KL +E + +V  AI +GF YHHAE  Y MLTFW+P+  S L  ++SH  G+ AF++N N E L
Subjt:  SFQSW-PKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL

AT2G04440.1 MutT/nudix family protein2.1e-1643.59Show/hide
Query:  SFQSW-PKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL
        SF++W  +GK+G+W+KL  E + +V +A+ +GF YHHAE  YA+L+ WI DL + + +++SH  G+ A ++N N+E L
Subjt:  SFQSW-PKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL

AT4G25434.1 nudix hydrolase homolog 106.8e-1544.74Show/hide
Query:  SFQSWP-KGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKE
        SF+ W  +GK+G+WL L      +V  A+ EGF YHHAE  Y ML +WIP+  S +  ++SH   V A ++N NKE
Subjt:  SFQSWP-KGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKE

AT5G47240.1 nudix hydrolase homolog 83.2e-2055.7Show/hide
Query:  SFQSW-PKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLS-SMLSSDSSHHFGVAAFLINDNKEAL
        S   W  KGK+G+WLKL  EQ+E+V +AI EGF YHHAE GY MLT+WIP+   SML +++SH  GV  F++N +KE L
Subjt:  SFQSW-PKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLS-SMLSSDSSHHFGVAAFLINDNKEAL

AT5G47650.1 nudix hydrolase homolog 24.0e-1543.04Show/hide
Query:  TSFQSWP-KGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL
        +S  +W  +GK+G+W+KL  +   +   A+ EGF +HHAE  Y ML +WIP     L +++SH  G+ AF+IN NKE L
Subjt:  TSFQSWP-KGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCTTTCCTTTGACAAGAAGGTGGACAAGTTTCCAGAGCTGGCCAAAAGGGAAAAGAGGGCTATGGCTCAAATTACATACAGAGCAGGCTGAAGTTGTTCTTGTGGC
TATTAATGAGGGGTTCAACTATCATCATGCTGAAGCAGGGTATGCCATGCTCACTTTCTGGATTCCTGATCTGTCCTCCATGCTTTCTTCTGACTCCTCGCATCATTTTG
GCGTTGCAGCATTCCTCATCAATGACAACAAGGAGGCATTGCCACCTTGTGGCCTTTTGAGGACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCTTTCCTTTGACAAGAAGGTGGACAAGTTTCCAGAGCTGGCCAAAAGGGAAAAGAGGGCTATGGCTCAAATTACATACAGAGCAGGCTGAAGTTGTTCTTGTGGC
TATTAATGAGGGGTTCAACTATCATCATGCTGAAGCAGGGTATGCCATGCTCACTTTCTGGATTCCTGATCTGTCCTCCATGCTTTCTTCTGACTCCTCGCATCATTTTG
GCGTTGCAGCATTCCTCATCAATGACAACAAGGAGGCATTGCCACCTTGTGGCCTTTTGAGGACTTGA
Protein sequenceShow/hide protein sequence
MRFPLTRRWTSFQSWPKGKRGLWLKLHTEQAEVVLVAINEGFNYHHAEAGYAMLTFWIPDLSSMLSSDSSHHFGVAAFLINDNKEALPPCGLLRT