; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13060 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13060
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein SEH1
Genome locationCarg_Chr04:3687991..3692463
RNA-Seq ExpressionCarg13060
SyntenyCarg13060
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0034198 - cellular response to amino acid starvation (biological process)
GO:1904263 - positive regulation of TORC1 signaling (biological process)
GO:0031080 - nuclear pore outer ring (cellular component)
GO:0035859 - Seh1-associated complex (cellular component)
GO:0005198 - structural molecule activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily
IPR037363 - Sec13/Seh1 family
IPR037597 - Nucleoporin Seh1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600526.1 Protein SEH1, partial [Cucurbita argyrosperma subsp. sororia]7.5e-18899.39Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHE AIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
Subjt:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST
        DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKG+AIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST
Subjt:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

KAG7031165.1 Protein SEH1 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-188100Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
Subjt:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST
        DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST
Subjt:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

XP_022942103.1 protein SEH1 [Cucurbita moschata]1.3e-18799.39Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHE AIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGN+KVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
Subjt:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST
        DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST
Subjt:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

XP_022981824.1 protein SEH1 [Cucurbita maxima]1.8e-18698.47Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVV+FDSLDPSSSSTSLTRTSNFKAHE AIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        LSKHFKSNSSQI+DIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
Subjt:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST
        DSAKVWEFD+AHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHN EVWDMEWDMGGMTLAST
Subjt:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

XP_023547085.1 protein SEH1 [Cucurbita pepo subsp. pepo]1.1e-18698.78Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFK HE AIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        LSKHFKSNSSQI+DIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAF SDTPQL
Subjt:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST
        DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST
Subjt:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

TrEMBL top hitse value%identityAlignment
A0A0A0KWZ8 WD_REPEATS_REGION domain-containing protein4.8e-16486.85Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        MEKAMATF KGT+CSAWNYS++RL T S+DGT+VIFDS  PSSSSTS T TSNFKAHE AI KIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        L K FKSNSSQI+D+QFGNSSSGLKMIAAFSDG +KVYELMDPL+LK+WQLQAEFQNVIDSISTVRK++C SASISWNP+RGE QQSSFV+AF S+TPQL
Subjt:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST
        +SAKVWEFDQAH RWLPVAELAL A+KGD VYAVAWAQNIGRPYEVIAVATQ+GIAIW LGL+PD DGRLS ERVALLSGHNGEVW+MEWDMGGMTLAST
Subjt:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A1S3BTS7 protein SEH18.4e-16989.3Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        MEKAMATFDKGT+CSAWN+S+SRL T S+DGT+VIFDS  PSSSSTSLTRTSNFKAHE AI KIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPL+WK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        L K FKSNSSQI+D+QFGNSSSGLKMIAAFSDG +KVYELMDPLDLKSWQLQAEFQNVIDSISTVRK++C SASISWNP+RGE QQSSFVLAF S+TPQL
Subjt:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST
        +SAKVWEFDQAHQRWLPVAELAL A+KGD VYAVAWAQNIGRPYEVIAVATQ+GIAIWRLGL+PD+DGRLSTERVALLSGHNGEVW+MEWDMGGMTLAST
Subjt:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1C5X6 protein SEH13.8e-16989.6Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        ME AMA+FDKGT+CSAWNYSASRL T S DGT+VIFDS DPSSSSTSLTRTSNFKAHE AI KIVWVPPEYGDS+ACICSDG+SSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        L K FKSNS+Q++DIQFGNSSSGLKMIAAFS  +VKVYELMDPLDLK+WQLQAEFQNVIDSISTVRKA+CLSASISWNP+RGERQQSSFVLA  S+TPQL
Subjt:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST
        +SAKVWEFDQAHQRWLPVAELAL ADKGD VYAVAWAQNIGRPYEVIAVATQKGIAIW LG NPD DGRLSTERVALLSGHNGEVW+MEWDMGGMTLAST
Subjt:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQ AAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1FTY0 protein SEH16.2e-18899.39Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHE AIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGN+KVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
Subjt:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST
        DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST
Subjt:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1J2X1 protein SEH18.9e-18798.47Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVV+FDSLDPSSSSTSLTRTSNFKAHE AIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        LSKHFKSNSSQI+DIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
Subjt:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST
        DSAKVWEFD+AHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHN EVWDMEWDMGGMTLAST
Subjt:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEPTS
        GKDGMVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEPTS

SwissProt top hitse value%identityAlignment
C1BK83 Nucleoporin SEH13.8e-3329.3Show/hide
Query:  AWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFK-----SNSS
        ++++   R+ T S+D +V ++D  D    +     T+++K H  +++++ W  PE+G  +A    D ++++WEE+V ++   Q  LS   K      + +
Subjt:  AWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFK-----SNSS

Query:  QIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQLDSAKV--WEF
         + D++F     GL +    +DG V++YE  D ++L  W LQ E       IS     +C    ISWNP+   R  S  +     D+    S KV  +E+
Subjt:  QIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQLDSAKV--WEF

Query:  DQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRL---GLNPDSDG--RLSTERVALLSGHNGEVWDMEWDMGGMTLASTGKD
         +  +++  V  L    D    V+ +A+A N+GR + V+A+AT K + I++L        S G  +L  +  A   GHN +VW + W++    LAS+G D
Subjt:  DQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRL---GLNPDSDG--RLSTERVALLSGHNGEVWDMEWDMGGMTLASTGKD

Query:  GMVRLWQSNLNGVW
        G VRLW++N    W
Subjt:  GMVRLWQSNLNGVW

Q4FZW5 Nucleoporin SEH1-A2.7e-3126.43Show/hide
Query:  AWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQ-----PLQWKLSKHFKSNSS
        ++++   R+ T S+D +V ++D     S + +   T+++K H  +++++ W  PE+G  +A    D ++++WEE+V ++         W        + +
Subjt:  AWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQ-----PLQWKLSKHFKSNSS

Query:  QIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQ-LDSAKVWEFD
         + D++F     GL +    +DG V++YE  D ++L  W LQ E       IS     +C    ISWNP+          +     +P  +   +++E++
Subjt:  QIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQ-LDSAKVWEFD

Query:  QAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWR---LGLNPDSDG---RLSTERVALLSGHNGEVWDMEWDMGGMTLASTGKD
        +  +++     L       D V+ +A+A N+GR + ++AVAT K + I+    L     S G   +     VA    HN +VW + W++ G  LAS+G D
Subjt:  QAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWR---LGLNPDSDG---RLSTERVALLSGHNGEVWDMEWDMGGMTLASTGKD

Query:  GMVRLWQSNLNGVW
        G VRLW++N    W
Subjt:  GMVRLWQSNLNGVW

Q5U4Y8 Nucleoporin SEH13.5e-3126.43Show/hide
Query:  AWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQ-----PLQWKLSKHFKSNSS
        ++++   R+ T S+D +V ++D     S +     T+++K H  +++++ W  PE+G  +A    D ++++WEE+V ++         W        + +
Subjt:  AWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQ-----PLQWKLSKHFKSNSS

Query:  QIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQ-LDSAKVWEFD
         + D++F     GL +    +DG V++YE  D ++L  W LQ E       IS     +C    ISWNP+          +     +P  +   +++E++
Subjt:  QIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQ-LDSAKVWEFD

Query:  QAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWR---LGLNPDSDG---RLSTERVALLSGHNGEVWDMEWDMGGMTLASTGKD
        +  +++     L       D V+ +A+A N+GR + ++AVAT K + I+    L     S G   +     VA    HN +VW + W++ G  LAS+G D
Subjt:  QAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWR---LGLNPDSDG---RLSTERVALLSGHNGEVWDMEWDMGGMTLASTGKD

Query:  GMVRLWQSNLNGVW
        G VRLW++N    W
Subjt:  GMVRLWQSNLNGVW

Q6GNF1 Nucleoporin SEH1-B1.2e-3126.43Show/hide
Query:  AWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQ-----PLQWKLSKHFKSNSS
        ++++   R+ T S+D +V ++D     S + +   T+++K H  +++++ W  PE+G  +A    D ++++WEE+V ++         W        + +
Subjt:  AWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQ-----PLQWKLSKHFKSNSS

Query:  QIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQ-LDSAKVWEFD
         + D++F     GL +    +DG V++YE  D ++L  W LQ E       IS     +C    ISWNP+          +     +P  +   +++E++
Subjt:  QIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQ-LDSAKVWEFD

Query:  QAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWR---LGLNPDSDG---RLSTERVALLSGHNGEVWDMEWDMGGMTLASTGKD
        +  +++     L       D V+ +A+A N+GR + ++AVAT K + I+    L     S G   +     VA    HN +VW + W++ G  LAS+G D
Subjt:  QAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWR---LGLNPDSDG---RLSTERVALLSGHNGEVWDMEWDMGGMTLASTGKD

Query:  GMVRLWQSNLNGVW
        G VRLW++N    W
Subjt:  GMVRLWQSNLNGVW

Q93VR9 Protein SEH16.1e-12462.77Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        M K+MAT D GT CS+WN S  RL  GS +G + I++S   +SSS++ + TS  +  E++I KIVW+P EYGD++AC+C DGS S+WEE+ EDA  L+WK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        L K  K+ SSQ++D+QFG S   LKM+AA+SDG ++V+EL++PL+LK+WQLQAEFQNVIDS+ST+ K + LSAS+SWNP +GE Q+ SFVLAF SD+P L
Subjt:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST
        +S+K+WEFD+AH RWL VAELAL  DKGD VYA++WA NIGRPYEV+AVAT KGI IW +GL PD +GRL  ++V+ LSGH GEVW MEWDM GMTLAST
Subjt:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEP
        G DGMV+LWQSNLNG WH+ A  EP
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEP

Arabidopsis top hitse value%identityAlignment
AT1G64350.1 Transducin/WD40 repeat-like superfamily protein4.3e-12562.77Show/hide
Query:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK
        M K+MAT D GT CS+WN S  RL  GS +G + I++S   +SSS++ + TS  +  E++I KIVW+P EYGD++AC+C DGS S+WEE+ EDA  L+WK
Subjt:  MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWK

Query:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL
        L K  K+ SSQ++D+QFG S   LKM+AA+SDG ++V+EL++PL+LK+WQLQAEFQNVIDS+ST+ K + LSAS+SWNP +GE Q+ SFVLAF SD+P L
Subjt:  LSKHFKSNSSQIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQL

Query:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST
        +S+K+WEFD+AH RWL VAELAL  DKGD VYA++WA NIGRPYEV+AVAT KGI IW +GL PD +GRL  ++V+ LSGH GEVW MEWDM GMTLAST
Subjt:  DSAKVWEFDQAHQRWLPVAELALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLAST

Query:  GKDGMVRLWQSNLNGVWHQHAAFEP
        G DGMV+LWQSNLNG WH+ A  EP
Subjt:  GKDGMVRLWQSNLNGVWHQHAAFEP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAGCTATGGCGACCTTCGACAAAGGCACGGTTTGTTCGGCTTGGAACTACTCCGCCAGCAGATTAGTCACTGGTTCGGCGGACGGAACCGTAGTCATCTTCGA
TTCTCTCGACCCTTCTTCCTCATCCACATCCTTAACTCGCACTTCAAACTTCAAGGCTCATGAGACTGCAATATTTAAGATTGTTTGGGTCCCTCCAGAGTATGGTGATT
CTATTGCATGCATTTGTTCAGATGGAAGTTCGTCATTGTGGGAGGAGGTTGTTGAAGATGCCCAGCCTCTGCAGTGGAAGCTATCCAAACACTTCAAAAGTAATTCATCT
CAAATCATAGACATCCAATTTGGAAATTCCTCTTCTGGTCTGAAAATGATTGCAGCATTTTCTGATGGCAATGTAAAAGTTTATGAGCTTATGGATCCTTTGGATTTGAA
GAGTTGGCAACTTCAGGCTGAATTTCAGAATGTCATTGATTCCATTTCTACAGTCAGGAAAGCAGCGTGCTTGTCTGCAAGTATATCTTGGAATCCAAATCGTGGTGAAA
GACAGCAATCGAGTTTTGTTTTGGCTTTTCGTTCGGATACACCACAGCTTGATTCTGCCAAGGTTTGGGAATTTGATCAGGCTCATCAAAGATGGCTTCCTGTTGCAGAG
TTGGCTTTGGAAGCAGACAAAGGTGATGGGGTTTATGCTGTTGCGTGGGCACAAAATATTGGAAGGCCATATGAGGTAATAGCTGTTGCAACCCAGAAAGGAATTGCAAT
ATGGCGCCTCGGATTAAACCCGGATTCAGATGGAAGGCTCTCAACAGAACGAGTTGCTCTGCTTTCTGGGCATAACGGCGAGGTGTGGGACATGGAGTGGGACATGGGTG
GTATGACATTAGCATCAACAGGAAAGGATGGGATGGTCCGGTTATGGCAATCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCCACTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ACAAAACCGAAATCAAAGGGGTTTTGTTGGAGCAGACGAGGGCGCGAAATAGAGAATTGAGATGGAGAAAGCTATGGCGACCTTCGACAAAGGCACGGTTTGTTCGGCTT
GGAACTACTCCGCCAGCAGATTAGTCACTGGTTCGGCGGACGGAACCGTAGTCATCTTCGATTCTCTCGACCCTTCTTCCTCATCCACATCCTTAACTCGCACTTCAAAC
TTCAAGGCTCATGAGACTGCAATATTTAAGATTGTTTGGGTCCCTCCAGAGTATGGTGATTCTATTGCATGCATTTGTTCAGATGGAAGTTCGTCATTGTGGGAGGAGGT
TGTTGAAGATGCCCAGCCTCTGCAGTGGAAGCTATCCAAACACTTCAAAAGTAATTCATCTCAAATCATAGACATCCAATTTGGAAATTCCTCTTCTGGTCTGAAAATGA
TTGCAGCATTTTCTGATGGCAATGTAAAAGTTTATGAGCTTATGGATCCTTTGGATTTGAAGAGTTGGCAACTTCAGGCTGAATTTCAGAATGTCATTGATTCCATTTCT
ACAGTCAGGAAAGCAGCGTGCTTGTCTGCAAGTATATCTTGGAATCCAAATCGTGGTGAAAGACAGCAATCGAGTTTTGTTTTGGCTTTTCGTTCGGATACACCACAGCT
TGATTCTGCCAAGGTTTGGGAATTTGATCAGGCTCATCAAAGATGGCTTCCTGTTGCAGAGTTGGCTTTGGAAGCAGACAAAGGTGATGGGGTTTATGCTGTTGCGTGGG
CACAAAATATTGGAAGGCCATATGAGGTAATAGCTGTTGCAACCCAGAAAGGAATTGCAATATGGCGCCTCGGATTAAACCCGGATTCAGATGGAAGGCTCTCAACAGAA
CGAGTTGCTCTGCTTTCTGGGCATAACGGCGAGGTGTGGGACATGGAGTGGGACATGGGTGGTATGACATTAGCATCAACAGGAAAGGATGGGATGGTCCGGTTATGGCA
ATCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCCACTTCTTAACCTTGAAAACGTTTTGTTTCTCTATGATGTAACCTCTTCCTGTATTCGTTGTTAG
GAAGAATTTTCAAATAACTTATCTGTCTTGCTGAGTGGGGTGCTTTGATTAGTGATGTCTTACTGGAGACCTATCTTTTATTTTAACAAATTTCTCTTGCTGAGTTGTGA
TTTTCGGTTGCTTAAGAGGTATATAGTCAACACGTACACAGGAAGAATAACTGACTAGAGAGAGTTGAGAATTGAGTTTTAAGATGAGATGCTTATGAATTTGAAGGAAA
ATAATTAGTATAACTAAGGATAATATAGTATTTCCGTCCTCCTCGAAAAGA
Protein sequenceShow/hide protein sequence
MEKAMATFDKGTVCSAWNYSASRLVTGSADGTVVIFDSLDPSSSSTSLTRTSNFKAHETAIFKIVWVPPEYGDSIACICSDGSSSLWEEVVEDAQPLQWKLSKHFKSNSS
QIIDIQFGNSSSGLKMIAAFSDGNVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKAACLSASISWNPNRGERQQSSFVLAFRSDTPQLDSAKVWEFDQAHQRWLPVAE
LALEADKGDGVYAVAWAQNIGRPYEVIAVATQKGIAIWRLGLNPDSDGRLSTERVALLSGHNGEVWDMEWDMGGMTLASTGKDGMVRLWQSNLNGVWHQHAAFEPTS