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Carg13070 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13070
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:3631269..3631583
RNA-Seq ExpressionCarg13070
SyntenyCarg13070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600517.1 hypothetical protein SDJN03_05750, partial [Cucurbita argyrosperma subsp. sororia]7.0e-4799.04Show/hide
Query:  MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVLDRME
        MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEV DRME
Subjt:  MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVLDRME

Query:  SLSS
        SLSS
Subjt:  SLSS

KAG7031156.1 hypothetical protein SDJN02_05196, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-47100Show/hide
Query:  MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVLDRME
        MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVLDRME
Subjt:  MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVLDRME

Query:  SLSS
        SLSS
Subjt:  SLSS

KGN53406.1 hypothetical protein Csa_015211 [Cucumis sativus]3.5e-2263.21Show/hide
Query:  MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIE-GRRKK------VNEDGSWRPSLESIMEVP
        MGNCVEVLSR+ EE+ TTTT +T  ME+ E+K GG+RIKVVL KEEL+WL EQ++E+GGK LEELL EIE GRR+K      +  + SW+PSLESIME P
Subjt:  MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIE-GRRKK------VNEDGSWRPSLESIMEVP

Query:  EVLDRM
        E+ D M
Subjt:  EVLDRM

XP_022942038.1 uncharacterized protein LOC111447226 [Cucurbita moschata]5.7e-4192.31Show/hide
Query:  MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVLDRME
        MGNCVEVLSRR EEEE TTT TTT+MEKEERK G VRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEV DRM+
Subjt:  MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVLDRME

Query:  SLSS
        SLSS
Subjt:  SLSS

XP_023543788.1 uncharacterized protein LOC111803552 [Cucurbita pepo subsp. pepo]1.6e-3889.42Show/hide
Query:  MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVLDRME
        MGNCVEVLSRR EEE T TT TTT MEKEERK GGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIE RR+KV+EDGSWRPSLESIMEVPEV DRME
Subjt:  MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVLDRME

Query:  SLSS
         LSS
Subjt:  SLSS

TrEMBL top hitse value%identityAlignment
A0A0A0KZU9 Uncharacterized protein1.7e-2263.21Show/hide
Query:  MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIE-GRRKK------VNEDGSWRPSLESIMEVP
        MGNCVEVLSR+ EE+ TTTT +T  ME+ E+K GG+RIKVVL KEEL+WL EQ++E+GGK LEELL EIE GRR+K      +  + SW+PSLESIME P
Subjt:  MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIE-GRRKK------VNEDGSWRPSLESIMEVP

Query:  EVLDRM
        E+ D M
Subjt:  EVLDRM

A0A5E4GAQ3 Uncharacterized protein6.4e-1448.57Show/hide
Query:  MGNCVEVLSRRSE----------EEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLESIM
        MGNCVE  + R +          E+E        + E    K G VR+K+VLTKEEL+WLM Q+++RGGK LE++L EI+  R KV E   W+PSLESIM
Subjt:  MGNCVEVLSRRSE----------EEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLESIM

Query:  EVPEV
        E PEV
Subjt:  EVPEV

A0A6J1C443 uncharacterized protein LOC1110083081.3e-1450Show/hide
Query:  MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIE---GRRKK---------VNEDGSWRPSLES
        MGNCVE + +  E  E          EK+E K GG+RIKVVLTKEEL+WLME + ERGG+ LE+LL EI+   GRR +          N   SW+PSLES
Subjt:  MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIE---GRRKK---------VNEDGSWRPSLES

Query:  IMEVPEVLDRME
        I+E PE+ D M+
Subjt:  IMEVPEVLDRME

A0A6J1FTR3 uncharacterized protein LOC1114472262.8e-4192.31Show/hide
Query:  MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVLDRME
        MGNCVEVLSRR EEEE TTT TTT+MEKEERK G VRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEV DRM+
Subjt:  MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVLDRME

Query:  SLSS
        SLSS
Subjt:  SLSS

A0A6P5TQH7 uncharacterized protein LOC1107696826.4e-1448.6Show/hide
Query:  MGNCVEVLSRRSE----------EEETTTTGTTTMMEKEER--KGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLES
        MGNCVE  + R +          E+E        + EKE    K G +R+K+VLTKEEL+WLM Q+++RGGK LE++L EI+  R KV E   W+PSLES
Subjt:  MGNCVEVLSRRSE----------EEETTTTGTTTMMEKEER--KGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLES

Query:  IMEVPEV
        IME PEV
Subjt:  IMEVPEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAACTGCGTCGAAGTTTTGTCTAGGCGGAGTGAAGAAGAAGAGACGACGACGACGGGGACTACGACAATGATGGAGAAAGAAGAAAGGAAAGGAGGGGGAGTGAG
GATAAAGGTAGTGTTGACGAAAGAGGAGCTGCAATGGCTAATGGAGCAAGTTCAGGAGCGAGGAGGGAAAGGGTTAGAAGAATTGTTGGGAGAGATCGAGGGACGAAGAA
AAAAAGTAAACGAAGATGGTTCGTGGAGACCTTCTTTGGAGAGTATTATGGAAGTTCCCGAAGTTCTCGATCGGATGGAGTCACTTTCTTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAACTGCGTCGAAGTTTTGTCTAGGCGGAGTGAAGAAGAAGAGACGACGACGACGGGGACTACGACAATGATGGAGAAAGAAGAAAGGAAAGGAGGGGGAGTGAG
GATAAAGGTAGTGTTGACGAAAGAGGAGCTGCAATGGCTAATGGAGCAAGTTCAGGAGCGAGGAGGGAAAGGGTTAGAAGAATTGTTGGGAGAGATCGAGGGACGAAGAA
AAAAAGTAAACGAAGATGGTTCGTGGAGACCTTCTTTGGAGAGTATTATGGAAGTTCCCGAAGTTCTCGATCGGATGGAGTCACTTTCTTCGTAA
Protein sequenceShow/hide protein sequence
MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVLDRMESLSS