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Carg13071 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13071
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:3629401..3629805
RNA-Seq ExpressionCarg13071
SyntenyCarg13071
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600516.1 hypothetical protein SDJN03_05749, partial [Cucurbita argyrosperma subsp. sororia]6.4e-61100Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSPSSQQQPEIKKVKKRVRFAETEPVIIAIDAEEETEKKRVVRITVKVTKQEANRM
        MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSPSSQQQPEIKKVKKRVRFAETEPVIIAIDAEEETEKKRVVRITVKVTKQEANRM
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSPSSQQQPEIKKVKKRVRFAETEPVIIAIDAEEETEKKRVVRITVKVTKQEANRM

Query:  LSRCSEGGVLELGDAACELMRIPAARVRSSMVAN
        LSRCSEGGVLELGDAACELMRIPAARVRSSMVAN
Subjt:  LSRCSEGGVLELGDAACELMRIPAARVRSSMVAN

KAG7015140.1 hypothetical protein SDJN02_22773, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-3977.14Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-SSQQQPEIKKVKKRVRFAETEPVIIAID-----AEEETEKKRVVRITVKVTK
        MI NLISSLNKKLQAVEISNRCRRTKKTT     VYR D++KKKQ    SQ +PEI+KVKKRVRFA+TEPVIIAID      EEETEKK VVRITVK+TK
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-SSQQQPEIKKVKKRVRFAETEPVIIAID-----AEEETEKKRVVRITVKVTK

Query:  QEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN
        QEANRMLSRCS+GGVLE  D A ELMRIPAARV SSMV N
Subjt:  QEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN

XP_008451951.1 PREDICTED: uncharacterized protein LOC103493098 [Cucumis melo]1.1e-3975.86Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-----SSQQQP-EIKKVKKRVRFAETEPVIIAI-----DAEEETEKKRVVRIT
        MISNLISSLNKKLQAVEISNRC+RTKK    TTYVYRDDL KKK SP     S Q QP EIKKVKKRVRFA+TEPVIIAI     + EEETEKK VVRIT
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-----SSQQQP-EIKKVKKRVRFAETEPVIIAI-----DAEEETEKKRVVRIT

Query:  VKVTKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN
        VK+TKQEANRMLSRCS  GVLE GD A EL+RIP  RV SS+VAN
Subjt:  VKVTKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN

XP_022985430.1 uncharacterized protein LOC111483436 [Cucurbita maxima]8.1e-4079.14Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKK--QSPS-SQQQPEIKKVKKRVRFAETEPVIIAID-----AEEETEKKRVVRITVKV
        MI NLISSLNKKLQAVEISNRCRRTKKTT     VYR D++KKK  QSPS SQ +PEI+KVKKRVRFA+TEPVIIAID      EEETEKK VVRITVK+
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKK--QSPS-SQQQPEIKKVKKRVRFAETEPVIIAID-----AEEETEKKRVVRITVKV

Query:  TKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSM
        TKQEANRMLSRCS+GGVLE GD A ELMRIPAARV SSM
Subjt:  TKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSM

XP_038906331.1 uncharacterized protein LOC120092170 [Benincasa hispida]1.4e-4480.42Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP---SSQQQPEIKKVKKRVRFAETEPVIIAI------DAEEETEKKRVVRITVK
        MISN I SLNKKLQAVEISNRCRRTKK    TTYVYRDDL+KKKQSP   SSQ QPEIKKVKKRVRFA+TEPVIIAI        EEETEKK VVRITVK
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP---SSQQQPEIKKVKKRVRFAETEPVIIAI------DAEEETEKKRVVRITVK

Query:  VTKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN
        +TK+EANRMLSRCS+GGVLE GD ACELMRIPA RV SSMVAN
Subjt:  VTKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN

TrEMBL top hitse value%identityAlignment
A0A0A0KYE1 Uncharacterized protein7.4e-3971.92Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-----SSQQQP-EIKKVKKRVRFAETEPVIIAIDAEEETE------KKRVVRI
        MISNLISSLNKKLQAVEIS+RC+RTKK    T YVYRD+L KK  SP     S Q QP EIKKVKKRVRFA+TEPVIIAI  + E E      +K+VVRI
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-----SSQQQP-EIKKVKKRVRFAETEPVIIAIDAEEETE------KKRVVRI

Query:  TVKVTKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN
        TVK+TKQEANRMLSRCS GGVLE GD A ELMRIP  RVRSS+VAN
Subjt:  TVKVTKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN

A0A1S3BS40 uncharacterized protein LOC1034930985.1e-4075.86Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-----SSQQQP-EIKKVKKRVRFAETEPVIIAI-----DAEEETEKKRVVRIT
        MISNLISSLNKKLQAVEISNRC+RTKK    TTYVYRDDL KKK SP     S Q QP EIKKVKKRVRFA+TEPVIIAI     + EEETEKK VVRIT
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-----SSQQQP-EIKKVKKRVRFAETEPVIIAI-----DAEEETEKKRVVRIT

Query:  VKVTKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN
        VK+TKQEANRMLSRCS  GVLE GD A EL+RIP  RV SS+VAN
Subjt:  VKVTKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN

A0A5D3D246 Uncharacterized protein5.1e-4075.86Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-----SSQQQP-EIKKVKKRVRFAETEPVIIAI-----DAEEETEKKRVVRIT
        MISNLISSLNKKLQAVEISNRC+RTKK    TTYVYRDDL KKK SP     S Q QP EIKKVKKRVRFA+TEPVIIAI     + EEETEKK VVRIT
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-----SSQQQP-EIKKVKKRVRFAETEPVIIAI-----DAEEETEKKRVVRIT

Query:  VKVTKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN
        VK+TKQEANRMLSRCS  GVLE GD A EL+RIP  RV SS+VAN
Subjt:  VKVTKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSMVAN

A0A6J1EU86 uncharacterized protein LOC1114376081.1e-3978.1Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-SSQQQPEIKKVKKRVRFAETEPVIIAID-----AEEETEKKRVVRITVKVTK
        MI NLISSLNKKLQAVEISNRCRRTKKTT     VYR D++KKKQ    SQ +PEI+KVKKRVRFA+TEPVIIAID      EEETEKK VVRITVK+TK
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSP-SSQQQPEIKKVKKRVRFAETEPVIIAID-----AEEETEKKRVVRITVKVTK

Query:  QEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSM
        QEANRMLSRCS+GGVLE GD A ELMRIPAARV SSM
Subjt:  QEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSM

A0A6J1JBA8 uncharacterized protein LOC1114834363.9e-4079.14Show/hide
Query:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKK--QSPS-SQQQPEIKKVKKRVRFAETEPVIIAID-----AEEETEKKRVVRITVKV
        MI NLISSLNKKLQAVEISNRCRRTKKTT     VYR D++KKK  QSPS SQ +PEI+KVKKRVRFA+TEPVIIAID      EEETEKK VVRITVK+
Subjt:  MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKK--QSPS-SQQQPEIKKVKKRVRFAETEPVIIAID-----AEEETEKKRVVRITVKV

Query:  TKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSM
        TKQEANRMLSRCS+GGVLE GD A ELMRIPAARV SSM
Subjt:  TKQEANRMLSRCSEGGVLELGDAACELMRIPAARVRSSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAGCAACTTGATTTCAAGCTTGAACAAAAAATTGCAGGCGGTTGAAATCAGCAATCGCTGCAGACGAACGAAGAAGACGACGACGACGACGACGTACGTTTACAG
AGACGATCTGAACAAGAAGAAGCAGTCGCCGTCGTCGCAGCAGCAACCGGAAATCAAGAAAGTGAAGAAGAGAGTGAGATTTGCAGAGACGGAGCCGGTGATAATCGCCA
TCGATGCAGAGGAGGAAACAGAGAAGAAGAGAGTGGTGAGAATAACGGTGAAAGTAACGAAGCAAGAAGCGAATCGGATGCTTTCGAGGTGCTCCGAAGGCGGCGTTCTG
GAACTCGGAGATGCGGCTTGTGAGCTCATGCGGATTCCTGCGGCTCGAGTTAGGTCTTCTATGGTGGCCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTAGCAACTTGATTTCAAGCTTGAACAAAAAATTGCAGGCGGTTGAAATCAGCAATCGCTGCAGACGAACGAAGAAGACGACGACGACGACGACGTACGTTTACAG
AGACGATCTGAACAAGAAGAAGCAGTCGCCGTCGTCGCAGCAGCAACCGGAAATCAAGAAAGTGAAGAAGAGAGTGAGATTTGCAGAGACGGAGCCGGTGATAATCGCCA
TCGATGCAGAGGAGGAAACAGAGAAGAAGAGAGTGGTGAGAATAACGGTGAAAGTAACGAAGCAAGAAGCGAATCGGATGCTTTCGAGGTGCTCCGAAGGCGGCGTTCTG
GAACTCGGAGATGCGGCTTGTGAGCTCATGCGGATTCCTGCGGCTCGAGTTAGGTCTTCTATGGTGGCCAATTGA
Protein sequenceShow/hide protein sequence
MISNLISSLNKKLQAVEISNRCRRTKKTTTTTTYVYRDDLNKKKQSPSSQQQPEIKKVKKRVRFAETEPVIIAIDAEEETEKKRVVRITVKVTKQEANRMLSRCSEGGVL
ELGDAACELMRIPAARVRSSMVAN