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Carg13078 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13078
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGDSL esterase/lipase
Genome locationCarg_Chr04:3602303..3603405
RNA-Seq ExpressionCarg13078
SyntenyCarg13078
Gene Ontology termsGO:0016788 - hydrolase activity, acting on ester bonds (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031149.1 hypothetical protein SDJN02_05188, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-64100Show/hide
Query:  MDQIINCNFSYFILYLVENRYLPAKFKHNLSLIALIFILISIIVLQSTSLLNPKDYNPLAPSSNGFTISPNSSFPISPASPPPSNSLVPALFVIGDSTVD
        MDQIINCNFSYFILYLVENRYLPAKFKHNLSLIALIFILISIIVLQSTSLLNPKDYNPLAPSSNGFTISPNSSFPISPASPPPSNSLVPALFVIGDSTVD
Subjt:  MDQIINCNFSYFILYLVENRYLPAKFKHNLSLIALIFILISIIVLQSTSLLNPKDYNPLAPSSNGFTISPNSSFPISPASPPPSNSLVPALFVIGDSTVD

Query:  CGTNNLLGTFARAHHLPYCRDFDWKVL
        CGTNNLLGTFARAHHLPYCRDFDWKVL
Subjt:  CGTNNLLGTFARAHHLPYCRDFDWKVL

XP_022931385.1 GDSL esterase/lipase At1g71691 [Cucurbita moschata]1.0e-2878.26Show/hide
Query:  LIALIFILISIIVLQSTSLLNPKDYNPLAPSSNGFTISPNSSFPISPASPPPSNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFD
        LI LIFILIS I L ST+L+ PK +NPLAP+  GFT  PNSSFP  PA+PPPSNSLVPALFVIGDSTVDCGTNN LGTFARA HLPY RDFD
Subjt:  LIALIFILISIIVLQSTSLLNPKDYNPLAPSSNGFTISPNSSFPISPASPPPSNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFD

XP_022985405.1 GDSL esterase/lipase At1g71691 [Cucurbita maxima]5.2e-2877.17Show/hide
Query:  LIALIFILISIIVLQSTSLLNPKDYNPLAPSSNGFTISPNSSFPISPASPPPSNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFD
        LI LIFILIS I L ST+L+ PK +NPLAP+  GFT  PNSSFP   A+PPPSNSLVPALFVIGDSTVDCGTNN LGTFARA HLPY RDFD
Subjt:  LIALIFILISIIVLQSTSLLNPKDYNPLAPSSNGFTISPNSSFPISPASPPPSNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFD

XP_023552224.1 GDSL esterase/lipase At1g71691 [Cucurbita pepo subsp. pepo]1.0e-2878.26Show/hide
Query:  LIALIFILISIIVLQSTSLLNPKDYNPLAPSSNGFTISPNSSFPISPASPPPSNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFD
        LI LIFILIS I L ST+L+ PK +NPLAP+  GFT  PNSSFP  PA+PPPSNSLVPALFVIGDSTVDCGTNN LGTFARA HLPY RDFD
Subjt:  LIALIFILISIIVLQSTSLLNPKDYNPLAPSSNGFTISPNSSFPISPASPPPSNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFD

XP_038904573.1 GDSL esterase/lipase At1g71691 [Benincasa hispida]3.6e-2979.57Show/hide
Query:  LIALIFILISIIVLQSTSLLNPK-DYNPLAPSSNGFTISPNSSFPISPASPPPSNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFD
        LI+LIFILIS I LQST+LLNP+   NPLAP+   FT  PNSSFPISP +PPPSNSLVPALFVIGDSTVDCGTNN LGTFARA HLPY RDFD
Subjt:  LIALIFILISIIVLQSTSLLNPK-DYNPLAPSSNGFTISPNSSFPISPASPPPSNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFD

TrEMBL top hitse value%identityAlignment
A0A0A0L7F0 Uncharacterized protein5.4e-2372.92Show/hide
Query:  LIALIFILISIIVLQSTS-LLNPKDY-NPLAPSSN-GFTISPNSSFPI-SPASPPPSNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFD
        LI+L FILIS + LQST+ L NP  + NPL P+ N GFT  PNSSFPI  P  PPPSNSLVPALFVIGDSTVD GTNN LGTFARA HLPY RDFD
Subjt:  LIALIFILISIIVLQSTS-LLNPKDY-NPLAPSSN-GFTISPNSSFPI-SPASPPPSNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFD

A0A5A7UZU1 GDSL esterase/lipase1.6e-2272.16Show/hide
Query:  IALIFILISIIVLQS-TSLLNPKDY-NPLAPS--SNGFTISPNSSFPI--SPASPPPSNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFD
        I+L FILIS + LQS T L N   + NPLAPS  ++GFT  PNSSFPI  SP  PPPSNSLVPALFVIGDSTVD GTNN LGTFARA HLPY RDFD
Subjt:  IALIFILISIIVLQS-TSLLNPKDY-NPLAPS--SNGFTISPNSSFPI--SPASPPPSNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFD

A0A6J1C4U4 GDSL esterase/lipase At1g716911.4e-2673.91Show/hide
Query:  LIALIFILISIIVLQSTSLLNPKDYNPLAPSSNGFTISPNSSFPISPASPPPSNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFD
        +I LI I IS I LQS +LLNPKD++P APS  GF   PN+S PISP +PPPSNSLVPALFVIGDSTVD GTNN LGTFARA HLPY RDFD
Subjt:  LIALIFILISIIVLQSTSLLNPKDYNPLAPSSNGFTISPNSSFPISPASPPPSNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFD

A0A6J1EZA3 GDSL esterase/lipase At1g716915.1e-2978.26Show/hide
Query:  LIALIFILISIIVLQSTSLLNPKDYNPLAPSSNGFTISPNSSFPISPASPPPSNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFD
        LI LIFILIS I L ST+L+ PK +NPLAP+  GFT  PNSSFP  PA+PPPSNSLVPALFVIGDSTVDCGTNN LGTFARA HLPY RDFD
Subjt:  LIALIFILISIIVLQSTSLLNPKDYNPLAPSSNGFTISPNSSFPISPASPPPSNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFD

A0A6J1JB87 GDSL esterase/lipase At1g716912.5e-2877.17Show/hide
Query:  LIALIFILISIIVLQSTSLLNPKDYNPLAPSSNGFTISPNSSFPISPASPPPSNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFD
        LI LIFILIS I L ST+L+ PK +NPLAP+  GFT  PNSSFP   A+PPPSNSLVPALFVIGDSTVDCGTNN LGTFARA HLPY RDFD
Subjt:  LIALIFILISIIVLQSTSLLNPKDYNPLAPSSNGFTISPNSSFPISPASPPPSNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFD

SwissProt top hitse value%identityAlignment
Q67ZI9 GDSL esterase/lipase At2g429901.1e-0457.14Show/hide
Query:  VPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDF
        +PA+ V GDS+VD G NN + T ARA+  PY RDF
Subjt:  VPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDF

Q8LFJ9 GDSL esterase/lipase 71.4e-0458.33Show/hide
Query:  LVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDF
        L PA FV GDS VD G NN + T ARA++ PY  DF
Subjt:  LVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDF

Q9FVV1 GDSL esterase/lipase At1g712502.2e-0557.89Show/hide
Query:  VPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFDWK
        VPA+FV+GDS VD G NN L T ARA+ LPY  D +++
Subjt:  VPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFDWK

Q9LZC5 GDSL esterase/lipase At5g038201.1e-0458.33Show/hide
Query:  LVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDF
        LVPAL ++GDS VD G NN L T  +A+  PY RDF
Subjt:  LVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDF

Q9SF78 GDSL esterase/lipase At1g716912.2e-0549.09Show/hide
Query:  PISPASPPP------SNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFD
        PIS A PPP       + +VPALFV GDS +D G NN + +FA+A++ PY  DF+
Subjt:  PISPASPPP------SNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFD

Arabidopsis top hitse value%identityAlignment
AT1G71250.1 GDSL-like Lipase/Acylhydrolase superfamily protein1.6e-0657.89Show/hide
Query:  VPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFDWK
        VPA+FV+GDS VD G NN L T ARA+ LPY  D +++
Subjt:  VPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFDWK

AT1G71691.2 GDSL-like Lipase/Acylhydrolase superfamily protein1.6e-0649.09Show/hide
Query:  PISPASPPP------SNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFD
        PIS A PPP       + +VPALFV GDS +D G NN + +FA+A++ PY  DF+
Subjt:  PISPASPPP------SNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDFD

AT2G42990.1 GDSL-like Lipase/Acylhydrolase superfamily protein7.8e-0657.14Show/hide
Query:  VPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDF
        +PA+ V GDS+VD G NN + T ARA+  PY RDF
Subjt:  VPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDF

AT4G10950.1 SGNH hydrolase-type esterase superfamily protein5.2e-1045.19Show/hide
Query:  NLSLIALIFILISIIV---LQSTSLLNPKDYNPLAPSSNGFTISPNSSFPISPA----SP--PPSNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYC
        ++ L+ L+F L+ I     L +   L  +  +P+ PS + F  S     P SP+    SP   PS   VPALFV GDS+VD GTNN LGT ARA  LPY 
Subjt:  NLSLIALIFILISIIV---LQSTSLLNPKDYNPLAPSSNGFTISPNSSFPISPA----SP--PPSNSLVPALFVIGDSTVDCGTNNLLGTFARAHHLPYC

Query:  RDFD
        RDFD
Subjt:  RDFD

AT5G03820.1 GDSL-like Lipase/Acylhydrolase family protein7.8e-0658.33Show/hide
Query:  LVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDF
        LVPAL ++GDS VD G NN L T  +A+  PY RDF
Subjt:  LVPALFVIGDSTVDCGTNNLLGTFARAHHLPYCRDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCAAATAATTAATTGTAATTTTTCCTATTTTATTTTATACTTAGTTGAAAACCGTTATCTTCCCGCCAAATTCAAACACAATCTCTCTCTAATTGCCCTAATCTT
CATCCTCATTTCGATCATTGTTCTTCAATCAACATCTCTGCTAAACCCTAAAGATTACAATCCTTTGGCGCCGAGCTCTAATGGCTTCACAATCTCTCCAAATTCATCTT
TTCCGATTTCCCCCGCCTCTCCGCCTCCGTCGAATTCTCTAGTCCCCGCCCTTTTCGTCATCGGCGACTCTACTGTCGACTGCGGCACCAACAATTTACTTGGTACCTTC
GCTCGCGCCCATCACCTTCCCTATTGTCGAGATTTCGACTGGAAGGTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACCAAATAATTAATTGTAATTTTTCCTATTTTATTTTATACTTAGTTGAAAACCGTTATCTTCCCGCCAAATTCAAACACAATCTCTCTCTAATTGCCCTAATCTT
CATCCTCATTTCGATCATTGTTCTTCAATCAACATCTCTGCTAAACCCTAAAGATTACAATCCTTTGGCGCCGAGCTCTAATGGCTTCACAATCTCTCCAAATTCATCTT
TTCCGATTTCCCCCGCCTCTCCGCCTCCGTCGAATTCTCTAGTCCCCGCCCTTTTCGTCATCGGCGACTCTACTGTCGACTGCGGCACCAACAATTTACTTGGTACCTTC
GCTCGCGCCCATCACCTTCCCTATTGTCGAGATTTCGACTGGAAGGTTTTGTAA
Protein sequenceShow/hide protein sequence
MDQIINCNFSYFILYLVENRYLPAKFKHNLSLIALIFILISIIVLQSTSLLNPKDYNPLAPSSNGFTISPNSSFPISPASPPPSNSLVPALFVIGDSTVDCGTNNLLGTF
ARAHHLPYCRDFDWKVL