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Carg13086 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13086
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:3553241..3553561
RNA-Seq ExpressionCarg13086
SyntenyCarg13086
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600501.1 hypothetical protein SDJN03_05734, partial [Cucurbita argyrosperma subsp. sororia]1.9e-4798.98Show/hide
Query:  MPISTESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR
        MPISTESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFF ASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR
Subjt:  MPISTESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR

KAG7031141.1 hypothetical protein SDJN02_05180, partial [Cucurbita argyrosperma subsp. argyrosperma]9.6e-52100Show/hide
Query:  MPISTESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFRVS
        MPISTESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFRVS
Subjt:  MPISTESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFRVS

Query:  ALTIAL
        ALTIAL
Subjt:  ALTIAL

XP_022942868.1 uncharacterized protein LOC111447770 [Cucurbita moschata]4.2e-4797.96Show/hide
Query:  MPISTESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR
        MPISTESSTPSSSCFI+CA PTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR
Subjt:  MPISTESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR

XP_022983484.1 uncharacterized protein LOC111482071 [Cucurbita maxima]1.4e-4798.98Show/hide
Query:  MPISTESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR
        MPISTESSTPSSSCFIECA PTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR
Subjt:  MPISTESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR

XP_023516499.1 uncharacterized protein LOC111780353 [Cucurbita pepo subsp. pepo]9.3e-4796.94Show/hide
Query:  MPISTESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR
        MPISTESSTPSSSCFIEC  PTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSP+DVCSGYEVLSKLEKAKTAWRKFVICFR
Subjt:  MPISTESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR

TrEMBL top hitse value%identityAlignment
A0A0A0KVF5 Uncharacterized protein3.7e-3372.55Show/hide
Query:  MPISTESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYE-VLSKLEKAKTAWRKFVICFRV
        MPIS  SS+  SS F++C  PT P++Q+VSKS SDRLL KFFDAS+FDFDY QSSLWSPPI RR+FLDSP DVCSG + VLSKLE AK AWRKF+ICFRV
Subjt:  MPISTESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYE-VLSKLEKAKTAWRKFVICFRV

Query:  SA
        S+
Subjt:  SA

A0A6J1CMP9 uncharacterized protein LOC1110128782.2e-3883Show/hide
Query:  MPIS--TESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR
        MPIS  + SS+ SSS F+EC +PT PSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSP +VCSGYEV SKL+ AK AWRKFVICFR
Subjt:  MPIS--TESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR

A0A6J1EYJ9 uncharacterized protein LOC1114376037.4e-3478.72Show/hide
Query:  STESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICF
        S+ SS+ SSS F++CA P   SVQLVSK  SDRLLGKFFDAS+FDFDYEQSSLWSPPIPRRVFLDSP DVCSGYEVLSKLE AK AWRK + CF
Subjt:  STESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICF

A0A6J1FVV1 uncharacterized protein LOC1114477702.0e-4797.96Show/hide
Query:  MPISTESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR
        MPISTESSTPSSSCFI+CA PTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR
Subjt:  MPISTESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR

A0A6J1J7J0 uncharacterized protein LOC1114820716.9e-4898.98Show/hide
Query:  MPISTESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR
        MPISTESSTPSSSCFIECA PTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR
Subjt:  MPISTESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G15140.1 unknown protein7.2e-0547.06Show/hide
Query:  TIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLD
        T   V+ +   +   LL KF D S F FDY QSSLWSP +PR     S LD
Subjt:  TIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAATCTCCACCGAATCTTCTACTCCCTCCTCCTCTTGCTTCATCGAATGCGCCAATCCGACGATTCCGAGCGTTCAACTGGTGTCGAAATCGGTGTCGGATCGGCT
TCTCGGCAAGTTCTTCGACGCCTCGCAATTCGACTTCGATTACGAACAGAGTAGCTTGTGGTCTCCGCCGATTCCGCGGCGAGTTTTTTTGGATTCTCCGCTCGATGTTT
GCTCCGGTTATGAGGTTCTCTCGAAGCTTGAGAAGGCGAAGACGGCATGGAGGAAATTCGTAATCTGTTTTAGAGTAAGTGCTCTCACGATCGCATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAATCTCCACCGAATCTTCTACTCCCTCCTCCTCTTGCTTCATCGAATGCGCCAATCCGACGATTCCGAGCGTTCAACTGGTGTCGAAATCGGTGTCGGATCGGCT
TCTCGGCAAGTTCTTCGACGCCTCGCAATTCGACTTCGATTACGAACAGAGTAGCTTGTGGTCTCCGCCGATTCCGCGGCGAGTTTTTTTGGATTCTCCGCTCGATGTTT
GCTCCGGTTATGAGGTTCTCTCGAAGCTTGAGAAGGCGAAGACGGCATGGAGGAAATTCGTAATCTGTTTTAGAGTAAGTGCTCTCACGATCGCATTGTGA
Protein sequenceShow/hide protein sequence
MPISTESSTPSSSCFIECANPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWSPPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVICFRVSALTIAL