; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13089 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13089
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUbiquitin domain-containing protein
Genome locationCarg_Chr04:3530010..3533736
RNA-Seq ExpressionCarg13089
SyntenyCarg13089
Gene Ontology termsNA
InterPro domainsIPR032752 - DC-UbP/UBTD2, N-terminal domain
IPR038169 - DC-UbP/UBTD2, N-terminal domain superfamily
IPR039869 - Ubiquitin domain-containing protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031138.1 Ubiquitin domain-containing protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-92100Show/hide
Query:  VSSSSSSSSSSSSSSSSSSFSTKSLFFGSAKFFHSNSPPSFCFSLASFLYLSTCELRLAFKQTAMGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLT
        VSSSSSSSSSSSSSSSSSSFSTKSLFFGSAKFFHSNSPPSFCFSLASFLYLSTCELRLAFKQTAMGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLT
Subjt:  VSSSSSSSSSSSSSSSSSSFSTKSLFFGSAKFFHSNSPPSFCFSLASFLYLSTCELRLAFKQTAMGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLT

Query:  QLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTVCYDERGPYHCFI
        QLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTVCYDERGPYHCFI
Subjt:  QLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTVCYDERGPYHCFI

XP_022142761.1 ubiquitin domain-containing protein 1-like [Momordica charantia]7.7e-4178.76Show/hide
Query:  MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIV
        MGC GSS+TNGDGSTK+IRKPKPWKHPQPITRSQL QLRDEFWDTAPHYGGRN                   EIWDALRAAAEAE SLAQAIIDSAGVIV
Subjt:  MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIV

Query:  QNADLTVCYDERG
        QNADLTVCYDERG
Subjt:  QNADLTVCYDERG

XP_022942916.1 ubiquitin domain-containing protein 1-like [Cucurbita moschata]2.2e-4383.19Show/hide
Query:  MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIV
        MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRN                   EIWDALRAAAEAELSLAQAIIDSAGVIV
Subjt:  MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIV

Query:  QNADLTVCYDERG
        QNADLTVCYDERG
Subjt:  QNADLTVCYDERG

XP_022983333.1 ubiquitin domain-containing protein 1-like isoform X1 [Cucurbita maxima]6.3e-59100Show/hide
Query:  MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIV
        MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIV
Subjt:  MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIV

Query:  QNADLTVCYDERG
        QNADLTVCYDERG
Subjt:  QNADLTVCYDERG

XP_038882682.1 ubiquitin domain-containing protein 2-like [Benincasa hispida]5.0e-4077.88Show/hide
Query:  MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIV
        MGC GSSQTNGDGS KKIRKPK WKHPQPITRSQL QLRDEFWDTAPHYGGR                   +EIWDALRAAAEAELSLAQAIIDSAGVIV
Subjt:  MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIV

Query:  QNADLTVCYDERG
        QNADLT+CYDERG
Subjt:  QNADLTVCYDERG

TrEMBL top hitse value%identityAlignment
A0A6J1CN58 ubiquitin domain-containing protein 1-like3.7e-4178.76Show/hide
Query:  MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIV
        MGC GSS+TNGDGSTK+IRKPKPWKHPQPITRSQL QLRDEFWDTAPHYGGRN                   EIWDALRAAAEAE SLAQAIIDSAGVIV
Subjt:  MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIV

Query:  QNADLTVCYDERG
        QNADLTVCYDERG
Subjt:  QNADLTVCYDERG

A0A6J1ETK8 ubiquitin domain-containing protein 2-like7.0e-4076.11Show/hide
Query:  MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIV
        MGC GSSQTNGDGS KKIRKPK WKHPQPITRSQL QLR+EFWDTAPHYGGR                   +EIWDALRAAAEAELSLAQAIIDSAGVI+
Subjt:  MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIV

Query:  QNADLTVCYDERG
        QNADLT+CYDERG
Subjt:  QNADLTVCYDERG

A0A6J1FQA3 ubiquitin domain-containing protein 1-like1.0e-4383.19Show/hide
Query:  MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIV
        MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRN                   EIWDALRAAAEAELSLAQAIIDSAGVIV
Subjt:  MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIV

Query:  QNADLTVCYDERG
        QNADLTVCYDERG
Subjt:  QNADLTVCYDERG

A0A6J1J725 ubiquitin domain-containing protein 1-like isoform X21.0e-4383.19Show/hide
Query:  MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIV
        MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRN                   EIWDALRAAAEAELSLAQAIIDSAGVIV
Subjt:  MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIV

Query:  QNADLTVCYDERG
        QNADLTVCYDERG
Subjt:  QNADLTVCYDERG

A0A6J1J7G7 ubiquitin domain-containing protein 1-like isoform X13.0e-59100Show/hide
Query:  MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIV
        MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIV
Subjt:  MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIV

Query:  QNADLTVCYDERG
        QNADLTVCYDERG
Subjt:  QNADLTVCYDERG

SwissProt top hitse value%identityAlignment
Q4V8W7 Ubiquitin domain-containing protein 19.8e-1539.42Show/hide
Query:  GCVG--SSQTNGDGS---------TKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEA----E
        GCVG   ++T G GS          + ++K KP WK   P+T  QL   RDEFWDTAP + GR                   +EIWDAL+AAA A    +
Subjt:  GCVG--SSQTNGDGS---------TKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEA----E

Query:  LSLAQAIIDSAGVIVQNADLTVCYDERG-----PYHC
          LAQAI+D A + + +  LT CYDE G     P +C
Subjt:  LSLAQAIIDSAGVIVQNADLTVCYDERG-----PYHC

Q5EAE3 Ubiquitin domain-containing protein 28.3e-1437.41Show/hide
Query:  GCVGSSQTNGD-------------GSTKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEA---
        GCVG+   +               G  + ++K KP WK   P+T  QL   RDEFWDTAP + GR                   +EIWDAL+AAA A   
Subjt:  GCVGSSQTNGD-------------GSTKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEA---

Query:  -ELSLAQAIIDSAGVIVQNADLTVCYDERG-----PYHC
         +  LAQAIID A + + +  LT CYDE G     P +C
Subjt:  -ELSLAQAIIDSAGVIVQNADLTVCYDERG-----PYHC

Q640W6 Ubiquitin domain-containing protein 12.9e-1439.57Show/hide
Query:  GCV-------GSSQTNGDGS------TKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEA---
        GCV       GS   N DG+       + ++K KP WK   P+T  QL   RDEFWDTAP + GR                   +EIWDAL+AAA A   
Subjt:  GCV-------GSSQTNGDGS------TKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEA---

Query:  -ELSLAQAIIDSAGVIVQNADLTVCYDERG-----PYHC
         +  LAQAIID A + + +  LT CYDE G     P +C
Subjt:  -ELSLAQAIIDSAGVIVQNADLTVCYDERG-----PYHC

Q6DG43 Ubiquitin domain-containing protein 22.9e-1438.85Show/hide
Query:  GCVGSS-------QTNGDGS------TKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEA---
        GCVGS          N DG+       + +++ KP WK   P+T  QL   RDEFWDTAP + GR                   +EIWDAL+AAA+A   
Subjt:  GCVGSS-------QTNGDGS------TKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEA---

Query:  -ELSLAQAIIDSAGVIVQNADLTVCYDERG-----PYHC
         +  LAQAIID A + + +  LT CYDE G     P +C
Subjt:  -ELSLAQAIIDSAGVIVQNADLTVCYDERG-----PYHC

Q6PGH0 Ubiquitin domain-containing protein 22.9e-1439.57Show/hide
Query:  GCV-------GSSQTNGDGS------TKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEA---
        GCV       GS   N DG+       + ++K KP WK   P+T  QL   RDEFWDTAP + GR                   +EIWDAL+AAA A   
Subjt:  GCV-------GSSQTNGDGS------TKKIRKPKP-WKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEA---

Query:  -ELSLAQAIIDSAGVIVQNADLTVCYDERG-----PYHC
         +  LAQAIID A + + +  LT CYDE G     P +C
Subjt:  -ELSLAQAIIDSAGVIVQNADLTVCYDERG-----PYHC

Arabidopsis top hitse value%identityAlignment
AT1G16960.1 Ubiquitin domain-containing protein4.1e-3259.65Show/hide
Query:  MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEA-ELSLAQAIIDSAGVI
        MGC  SS+T  +G  +KIR+PK WKHPQPI+R +LTQ+R+EFWDTAPHYGG+                   +EIWDALRAAAE  +LSLAQ I++SAGVI
Subjt:  MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEA-ELSLAQAIIDSAGVI

Query:  VQNADLTVCYDERG
        VQN DLT+CYDE+G
Subjt:  VQNADLTVCYDERG

AT1G53400.1 Ubiquitin domain-containing protein5.9e-3967.26Show/hide
Query:  MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIV
        MGC GS+Q+  DGS KKIRKPKPWKH QPIT+++L +LR+EFWDTAPHYGGR                   +EIWDALRAAAEA++SLAQAI+DSAGVIV
Subjt:  MGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIV

Query:  QNADLTVCYDERG
        QN DLTVCYDERG
Subjt:  QNADLTVCYDERG

AT5G45740.1 Ubiquitin domain-containing protein9.7e-3460Show/hide
Query:  MGCVGSSQTNGDGST--KKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGV
        MGC+GSSQ   +G    KKI KPKPW H +PITR+QLT +R+EFWDT+PHYGG+                   REIW+ALRAAAEA+L LAQ I+DSAGV
Subjt:  MGCVGSSQTNGDGST--KKIRKPKPWKHPQPITRSQLTQLRDEFWDTAPHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGV

Query:  IVQNADLTVCYDERG
        IVQN DLT+C+DERG
Subjt:  IVQNADLTVCYDERG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCTTCTCTACAAAAAGCTTATTCTTCGGTTCTGCAAAATTCTTCCATTCCAACTC
TCCACCGAGTTTCTGCTTTTCTCTGGCTTCGTTTTTGTATCTCTCTACTTGTGAATTGAGGCTTGCGTTCAAGCAAACGGCAATGGGCTGTGTTGGATCGTCGCAGACCA
ACGGAGATGGATCCACAAAGAAGATACGCAAGCCAAAACCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTCACGCAGCTACGGGATGAGTTTTGGGACACTGCA
CCTCACTATGGCGGCCGAAATGGTAGTCCTGTCTCTAACATATTTGTGCCAGTGTTAAAGTCTTCATGGTTTTTTAGAGAGATTTGGGATGCACTACGAGCAGCTGCTGA
AGCAGAGCTATCTCTAGCGCAAGCAATCATAGACAGTGCTGGGGTCATCGTTCAAAATGCAGATTTAACAGTTTGTTACGATGAGAGAGGTCCATACCATTGCTTCATTT
AA
mRNA sequenceShow/hide mRNA sequence
GTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCTTCTCTACAAAAAGCTTATTCTTCGGTTCTGCAAAATTCTTCCATTCCAACTC
TCCACCGAGTTTCTGCTTTTCTCTGGCTTCGTTTTTGTATCTCTCTACTTGTGAATTGAGGCTTGCGTTCAAGCAAACGGCAATGGGCTGTGTTGGATCGTCGCAGACCA
ACGGAGATGGATCCACAAAGAAGATACGCAAGCCAAAACCTTGGAAGCATCCTCAGCCAATTACAAGGTCTCAGCTCACGCAGCTACGGGATGAGTTTTGGGACACTGCA
CCTCACTATGGCGGCCGAAATGGTAGTCCTGTCTCTAACATATTTGTGCCAGTGTTAAAGTCTTCATGGTTTTTTAGAGAGATTTGGGATGCACTACGAGCAGCTGCTGA
AGCAGAGCTATCTCTAGCGCAAGCAATCATAGACAGTGCTGGGGTCATCGTTCAAAATGCAGATTTAACAGTTTGTTACGATGAGAGAGGTCCATACCATTGCTTCATTT
AA
Protein sequenceShow/hide protein sequence
VSSSSSSSSSSSSSSSSSSFSTKSLFFGSAKFFHSNSPPSFCFSLASFLYLSTCELRLAFKQTAMGCVGSSQTNGDGSTKKIRKPKPWKHPQPITRSQLTQLRDEFWDTA
PHYGGRNGSPVSNIFVPVLKSSWFFREIWDALRAAAEAELSLAQAIIDSAGVIVQNADLTVCYDERGPYHCFI