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Carg13126 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13126
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTify domain-containing protein
Genome locationCarg_Chr04:3308402..3309114
RNA-Seq ExpressionCarg13126
SyntenyCarg13126
Gene Ontology termsGO:0009611 - response to wounding (biological process)
GO:0031347 - regulation of defense response (biological process)
GO:2000022 - regulation of jasmonic acid mediated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR018467 - CO/COL/TOC1, conserved site
IPR040390 - TIFY/JAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600453.1 putative aquaporin NIP5-1, partial [Cucurbita argyrosperma subsp. sororia]9.1e-4465.87Show/hide
Query:  EVLLGQKTNEK--RGKGNWHLANGKGVQFGALSLPIFSCNSHVRDPVFLQLLLLVFLITFMESGFWVFVYGCRMAMPLNHQKQIMVFNNGTASVCDLTEL
        EVLLGQKT +K  +G G W +    G +F +L L ++  +S   +P F                   F     MAMPLNHQKQIMVFNNGTASVCD TEL
Subjt:  EVLLGQKTNEK--RGKGNWHLANGKGVQFGALSLPIFSCNSHVRDPVFLQLLLLVFLITFMESGFWVFVYGCRMAMPLNHQKQIMVFNNGTASVCDLTEL

Query:  QVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT
        QVRAILGIASQERN SK QWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSM PYHKPRT
Subjt:  QVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT

KAG7031101.1 Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-92100Show/hide
Query:  MPICLEEVLLGQKTNEKRGKGNWHLANGKGVQFGALSLPIFSCNSHVRDPVFLQLLLLVFLITFMESGFWVFVYGCRMAMPLNHQKQIMVFNNGTASVCD
        MPICLEEVLLGQKTNEKRGKGNWHLANGKGVQFGALSLPIFSCNSHVRDPVFLQLLLLVFLITFMESGFWVFVYGCRMAMPLNHQKQIMVFNNGTASVCD
Subjt:  MPICLEEVLLGQKTNEKRGKGNWHLANGKGVQFGALSLPIFSCNSHVRDPVFLQLLLLVFLITFMESGFWVFVYGCRMAMPLNHQKQIMVFNNGTASVCD

Query:  LTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT
        LTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT
Subjt:  LTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT

XP_022941937.1 uncharacterized protein LOC111447151 [Cucurbita moschata]1.1e-44100Show/hide
Query:  MAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT
        MAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT
Subjt:  MAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT

XP_022988981.1 uncharacterized protein LOC111486178 [Cucurbita maxima]2.5e-4195.74Show/hide
Query:  MAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT
        MAMPLNHQKQIMVFNNGTASVCD TELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSM PYHK  T
Subjt:  MAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT

XP_023526418.1 uncharacterized protein LOC111789898 [Cucurbita pepo subsp. pepo]1.2e-4398.94Show/hide
Query:  MAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT
        MAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSM PYHKPRT
Subjt:  MAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT

TrEMBL top hitse value%identityAlignment
A0A6J1C4G2 uncharacterized protein LOC1110081921.2e-2573.91Show/hide
Query:  MPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMP---NGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHK
        M +NHQ+QIMVF NGT S CDLTELQ RAIL +ASQE+N +    W+NPE LSLQMP   NGNAGFSIKKSLQRFLQRR TRRI+SM PYHK
Subjt:  MPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMP---NGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHK

A0A6J1ET94 uncharacterized protein LOC1114375146.2e-2267.68Show/hide
Query:  MAMP--LNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLS-LQMP-----NGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHK
        MA P  LN Q+QIMVF NGT S+CD TELQ RAIL +AS+ER+S+ S+ W++PE LS LQMP     NGNA F IKKSLQRFLQRR  RRIRSM PYHK
Subjt:  MAMP--LNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLS-LQMP-----NGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHK

A0A6J1FNU6 uncharacterized protein LOC1114471515.2e-45100Show/hide
Query:  MAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT
        MAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT
Subjt:  MAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT

A0A6J1J887 uncharacterized protein LOC1114826351.2e-2260.68Show/hide
Query:  ESGFWVFVYGCRMAMP--LNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLS-LQMP-----------NGNAGFSIKKSLQRF
        E+ F        MAMP  LN Q+QIMVF NGT S+CD TELQ RAIL +AS+ER+S+    W+NPE LS LQMP           NGNAGF IKKSLQRF
Subjt:  ESGFWVFVYGCRMAMP--LNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLS-LQMP-----------NGNAGFSIKKSLQRF

Query:  LQRRNTRRIRSMYPYHK
        LQRR  RRIRSM PYHK
Subjt:  LQRRNTRRIRSMYPYHK

A0A6J1JIQ6 uncharacterized protein LOC1114861781.2e-4195.74Show/hide
Query:  MAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT
        MAMPLNHQKQIMVFNNGTASVCD TELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSM PYHK  T
Subjt:  MAMPLNHQKQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT

SwissProt top hitse value%identityAlignment
Q8LBM2 Protein TIFY 5A2.7e-0640.62Show/hide
Query:  PLNHQKQIMVFNNGTASV-CDLTELQVRAILGIASQERNSSKSQWWSNPERLSL-----QMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPR
        P    ++I +F NG      D+T LQ R+I+ IAS+E  +  S   S+P   S      Q+PN  A  S+KKSLQ FLQ+R   RI++  PYH  R
Subjt:  PLNHQKQIMVFNNGTASV-CDLTELQVRAILGIASQERNSSKSQWWSNPERLSL-----QMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPR

Arabidopsis top hitse value%identityAlignment
AT1G30135.1 jasmonate-zim-domain protein 81.9e-0740.62Show/hide
Query:  PLNHQKQIMVFNNGTASV-CDLTELQVRAILGIASQERNSSKSQWWSNPERLSL-----QMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPR
        P    ++I +F NG      D+T LQ R+I+ IAS+E  +  S   S+P   S      Q+PN  A  S+KKSLQ FLQ+R   RI++  PYH  R
Subjt:  PLNHQKQIMVFNNGTASV-CDLTELQVRAILGIASQERNSSKSQWWSNPERLSL-----QMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPR

AT2G34600.1 jasmonate-zim-domain protein 73.4e-0432.32Show/hide
Query:  MAMPLNHQKQIMVFNNGTASV-CDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGF-----SIKKSLQRFLQRRNTRRIRSMYPYHKPR
        ++ P    + + +F NG   V  DLT L+  AIL +AS++         S+       +PN +  F     S+K+SL  FLQ+R+  RI++  PYH+ R
Subjt:  MAMPLNHQKQIMVFNNGTASV-CDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGF-----SIKKSLQRFLQRRNTRRIRSMYPYHKPR

AT3G22275.1 unknown protein7.5e-0436.99Show/hide
Query:  KQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTR
        K+I  F +G  S  DL E+Q+RAI+ +AS++R  +  +    P RL   +     G S+K+S++RFL++R  R
Subjt:  KQIMVFNNGTASVCDLTELQVRAILGIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCATTTGCTTAGAAGAGGTCTTATTGGGACAGAAAACAAATGAAAAAAGAGGTAAAGGGAATTGGCATTTGGCAAATGGGAAGGGAGTTCAGTTTGGAGCTTTGTC
TTTGCCCATCTTCTCCTGCAATTCCCATGTGAGAGACCCCGTTTTTCTTCAGCTTCTTCTTCTTGTTTTTTTGATAACTTTCATGGAAAGTGGATTTTGGGTTTTTGTTT
ATGGGTGTAGGATGGCCATGCCATTGAATCATCAGAAGCAGATCATGGTTTTCAATAATGGAACAGCTTCGGTCTGTGACTTGACTGAACTCCAGGTAAGAGCCATATTA
GGGATAGCAAGCCAAGAGAGGAATAGCAGCAAGAGCCAATGGTGGAGCAACCCAGAACGGTTGAGTCTGCAAATGCCAAATGGTAATGCAGGTTTCTCCATTAAGAAATC
TCTTCAGAGGTTCCTACAAAGGAGGAACACCAGAAGAATTCGATCCATGTATCCGTATCACAAACCACGTACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCATTTGCTTAGAAGAGGTCTTATTGGGACAGAAAACAAATGAAAAAAGAGGTAAAGGGAATTGGCATTTGGCAAATGGGAAGGGAGTTCAGTTTGGAGCTTTGTC
TTTGCCCATCTTCTCCTGCAATTCCCATGTGAGAGACCCCGTTTTTCTTCAGCTTCTTCTTCTTGTTTTTTTGATAACTTTCATGGAAAGTGGATTTTGGGTTTTTGTTT
ATGGGTGTAGGATGGCCATGCCATTGAATCATCAGAAGCAGATCATGGTTTTCAATAATGGAACAGCTTCGGTCTGTGACTTGACTGAACTCCAGGTAAGAGCCATATTA
GGGATAGCAAGCCAAGAGAGGAATAGCAGCAAGAGCCAATGGTGGAGCAACCCAGAACGGTTGAGTCTGCAAATGCCAAATGGTAATGCAGGTTTCTCCATTAAGAAATC
TCTTCAGAGGTTCCTACAAAGGAGGAACACCAGAAGAATTCGATCCATGTATCCGTATCACAAACCACGTACCTAA
Protein sequenceShow/hide protein sequence
MPICLEEVLLGQKTNEKRGKGNWHLANGKGVQFGALSLPIFSCNSHVRDPVFLQLLLLVFLITFMESGFWVFVYGCRMAMPLNHQKQIMVFNNGTASVCDLTELQVRAIL
GIASQERNSSKSQWWSNPERLSLQMPNGNAGFSIKKSLQRFLQRRNTRRIRSMYPYHKPRT