; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13148 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13148
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNDR1/HIN1-like protein 12
Genome locationCarg_Chr04:3164505..3165107
RNA-Seq ExpressionCarg13148
SyntenyCarg13148
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600429.1 hypothetical protein SDJN03_05662, partial [Cucurbita argyrosperma subsp. sororia]5.2e-10799Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSF
        MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEA NDNAKAHASFSDTSLFLSF
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSF

Query:  LGLNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFHHSNGTYLISPCSSRAK
        LGLNIAELVADPFDVRKNSSVQF YAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFHHSNGTYLISPCSSRAK
Subjt:  LGLNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFHHSNGTYLISPCSSRAK

KAG7031080.1 hypothetical protein SDJN02_05119, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-109100Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSF
        MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSF
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSF

Query:  LGLNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFHHSNGTYLISPCSSRAK
        LGLNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFHHSNGTYLISPCSSRAK
Subjt:  LGLNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFHHSNGTYLISPCSSRAK

XP_004150550.1 uncharacterized protein LOC101214190 [Cucumis sativus]1.8e-8378Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSF
        MPPKLIS+AKR THPL+W AA+LCT+VSIAVII G+ VFIGYLVIHPRIPTIS++DAHLDNFQ DIAGRLEV LTI++EA NDNAKAHASFSD+S FL F
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSF

Query:  LGLNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFHHSNGTYLISPCSSRAK
        LG+ IA+LVADPF+VRKNSS++F YAV S  IPLNPEQME VD  LK DL +FDL GNTRVQWRVGL GSVK+ C +HCGLKFH SNGTYL SPCSSR K
Subjt:  LGLNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFHHSNGTYLISPCSSRAK

XP_022942740.1 uncharacterized protein LOC111447688 [Cucurbita moschata]2.7e-9597.28Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSF
        MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVI AHLDNFQN+IAGRLEV LTILVEA NDNAKAHASFSDTSLFLSF
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSF

Query:  LGLNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFH
        LGLNIAELVADPFDVRKN SVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFH
Subjt:  LGLNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFH

XP_023526921.1 uncharacterized protein LOC111790256 [Cucurbita pepo subsp. pepo]2.1e-10093.5Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSF
        MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIP I VI AHL+NFQNDIAGRLEV LTILVEA NDNAKAHASFSDT LF SF
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSF

Query:  LGLNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFHHSNGTYLISPCSSRAK
        LGLNIAELVADPFDVRKNSSVQFHYAVNSI IPLNPEQMEEVDF LKTDLIQF+LNG+TRVQWRVGLFGSVKFVCQIHCGL+FHHSNGTYLISPCSSRAK
Subjt:  LGLNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFHHSNGTYLISPCSSRAK

TrEMBL top hitse value%identityAlignment
A0A0A0KX91 Uncharacterized protein8.7e-8478Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSF
        MPPKLIS+AKR THPL+W AA+LCT+VSIAVII G+ VFIGYLVIHPRIPTIS++DAHLDNFQ DIAGRLEV LTI++EA NDNAKAHASFSD+S FL F
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSF

Query:  LGLNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFHHSNGTYLISPCSSRAK
        LG+ IA+LVADPF+VRKNSS++F YAV S  IPLNPEQME VD  LK DL +FDL GNTRVQWRVGL GSVK+ C +HCGLKFH SNGTYL SPCSSR K
Subjt:  LGLNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFHHSNGTYLISPCSSRAK

A0A1S3BSH0 NDR1/HIN1-like protein 129.6e-8377.5Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSF
        MPPKLIS+AKRRTHPL+W AA+LCT+VSIAVII G+ VFIGYLVIHPRIPTIS++DAHLDNFQ DIAGRLEV LTI+VEA NDNAKAHASFSD+S FL F
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSF

Query:  LGLNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFHHSNGTYLISPCSSRAK
        L + IA+LVADPF+V+KNSS++FHYAV S  IPLNPEQME VD+ LK DL  F L GNTRVQWRVGL GSVK+ C +HC LKFH SNGTYL SPCSSR K
Subjt:  LGLNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFHHSNGTYLISPCSSRAK

A0A5D3D1V8 NDR1/HIN1-like protein 129.6e-8377.5Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSF
        MPPKLIS+AKRRTHPL+W AA+LCT+VSIAVII G+ VFIGYLVIHPRIPTIS++DAHLDNFQ DIAGRLEV LTI+VEA NDNAKAHASFSD+S FL F
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSF

Query:  LGLNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFHHSNGTYLISPCSSRAK
        L + IA+LVADPF+V+KNSS++FHYAV S  IPLNPEQME VD+ LK DL  F L GNTRVQWRVGL GSVK+ C +HC LKFH SNGTYL SPCSSR K
Subjt:  LGLNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFHHSNGTYLISPCSSRAK

A0A6J1C468 uncharacterized protein LOC1110081151.1e-8377.5Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSF
        MPP+LIS+AKRRTHPL+WFAAVLCT++SIAVII G+ VF+GYLVIHPRIPTISVI AHLD FQ D+AGRLEV LTI+VEA NDNAKAHASFSDTS FLSF
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSF

Query:  LGLNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFHHSNGTYLISPCSSRAK
        LG+ IA LVADPF VRKNSS +F YA+ S  IPLNPEQMEE D+ALK+DL +FDL GNTRVQWRVG+ GSVK+ C +HC LKFH SNGTYL  PCSS+AK
Subjt:  LGLNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFHHSNGTYLISPCSSRAK

A0A6J1FWU7 uncharacterized protein LOC1114476881.3e-9597.28Show/hide
Query:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSF
        MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVI AHLDNFQN+IAGRLEV LTILVEA NDNAKAHASFSDTSLFLSF
Subjt:  MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSF

Query:  LGLNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFH
        LGLNIAELVADPFDVRKN SVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFH
Subjt:  LGLNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G26350.1 LOCATED IN: chloroplast6.1e-1325.86Show/hide
Query:  RRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSFLGLNIAELVA
        R T+ + W AA  C +  + +I+ G+ + I YLV  PR P + +  A+L+    D+   L   LTIL    N + K+   FS  +  L +    IA    
Subjt:  RRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSFLGLNIAELVA

Query:  DPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFH
        +PF V K +S+  +  + S  + L   Q  E+   ++T  +  +L G    +  +G      +    HC +  +
Subjt:  DPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFH

AT4G26490.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family4.8e-1026.35Show/hide
Query:  RTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSFLGLNIAELVAD
        RT   IW  A  C + S+ +I   +   I +L I PRIP   + +A+L     D        L++LV   N N K    F    + L F    IA  V  
Subjt:  RTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSFLGLNIAELVAD

Query:  PFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIH
        PF  +K+ +      + S ++ L      E+   L+ + I++++ G  +V+     FG + +  Q+H
Subjt:  PFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIH

AT5G45320.1 FUNCTIONS IN: molecular_function unknown1.1e-5151.01Show/hide
Query:  PKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSFLG
        P+L S  +  T P IW AA++C ++SI VI+ G+ VF+GYLVIHPR+P ISV DAHLD  + DI G L+  LTI++   NDNAKAHA F +T   LS+ G
Subjt:  PKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSFLG

Query:  LNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFHHSNGTYLISPCSSRAK
          IA L A  F+V K  S+   Y V S  IPLNP  M+ VD+A+K D+I F+L G +R +WRVG  GSVKF C + C L+F  S+ +Y+ SPC+S  K
Subjt:  LNIAELVADPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFHHSNGTYLISPCSSRAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCCCGAAACTGATCTCCAACGCAAAGCGCCGCACTCATCCGCTCATTTGGTTCGCTGCCGTTCTCTGTACTCTGGTTTCGATCGCCGTCATAATCGCCGGTGTCGG
CGTCTTCATTGGCTACCTAGTGATCCACCCTAGGATTCCGACGATCAGTGTCATCGACGCTCATCTCGATAACTTCCAGAACGACATCGCCGGCCGCCTCGAGGTTCATT
TAACGATCCTCGTCGAGGCGGGGAATGATAACGCGAAAGCGCATGCGAGTTTCTCCGATACGAGTTTGTTCCTGAGTTTTCTAGGGCTAAACATCGCGGAGCTTGTAGCC
GATCCATTCGATGTGAGGAAGAACAGCTCTGTCCAGTTCCATTACGCCGTGAATTCGATTATGATTCCTTTGAATCCAGAGCAGATGGAGGAAGTCGATTTCGCGTTGAA
GACGGATCTGATCCAGTTCGATTTGAACGGGAACACGAGAGTTCAATGGCGAGTTGGATTGTTTGGATCCGTGAAATTCGTATGCCAAATTCATTGCGGGCTTAAATTTC
ATCATTCCAATGGAACGTACTTGATTTCGCCTTGTAGTTCTCGAGCGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCCCGAAACTGATCTCCAACGCAAAGCGCCGCACTCATCCGCTCATTTGGTTCGCTGCCGTTCTCTGTACTCTGGTTTCGATCGCCGTCATAATCGCCGGTGTCGG
CGTCTTCATTGGCTACCTAGTGATCCACCCTAGGATTCCGACGATCAGTGTCATCGACGCTCATCTCGATAACTTCCAGAACGACATCGCCGGCCGCCTCGAGGTTCATT
TAACGATCCTCGTCGAGGCGGGGAATGATAACGCGAAAGCGCATGCGAGTTTCTCCGATACGAGTTTGTTCCTGAGTTTTCTAGGGCTAAACATCGCGGAGCTTGTAGCC
GATCCATTCGATGTGAGGAAGAACAGCTCTGTCCAGTTCCATTACGCCGTGAATTCGATTATGATTCCTTTGAATCCAGAGCAGATGGAGGAAGTCGATTTCGCGTTGAA
GACGGATCTGATCCAGTTCGATTTGAACGGGAACACGAGAGTTCAATGGCGAGTTGGATTGTTTGGATCCGTGAAATTCGTATGCCAAATTCATTGCGGGCTTAAATTTC
ATCATTCCAATGGAACGTACTTGATTTCGCCTTGTAGTTCTCGAGCGAAATGA
Protein sequenceShow/hide protein sequence
MPPKLISNAKRRTHPLIWFAAVLCTLVSIAVIIAGVGVFIGYLVIHPRIPTISVIDAHLDNFQNDIAGRLEVHLTILVEAGNDNAKAHASFSDTSLFLSFLGLNIAELVA
DPFDVRKNSSVQFHYAVNSIMIPLNPEQMEEVDFALKTDLIQFDLNGNTRVQWRVGLFGSVKFVCQIHCGLKFHHSNGTYLISPCSSRAK