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Carg13154 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13154
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:3131906..3133506
RNA-Seq ExpressionCarg13154
SyntenyCarg13154
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600422.1 hypothetical protein SDJN03_05655, partial [Cucurbita argyrosperma subsp. sororia]6.2e-1888.33Show/hide
Query:  LYTLLSLLFSSLLSVSTLSLIIPGEEEALSPNGGAKQCNGVSKTRILVADQGQDDDEKYE
        L++ L  L  SLLSVSTLSLIIPGEEEALSPNGGAKQCNGVSKTRILVADQGQDDDEKYE
Subjt:  LYTLLSLLFSSLLSVSTLSLIIPGEEEALSPNGGAKQCNGVSKTRILVADQGQDDDEKYE
KAG7031075.1 hypothetical protein SDJN02_05114 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-59100Show/hide
Query:  MALICMKVPTSIRNALEDLLVAFWIINSSSSVEHPCGYLTPHIVKLESESPKRTISASGGLGPLYTLLSLLFSSLLSVSTLSLIIPGEEEALSPNGGAKQ
        MALICMKVPTSIRNALEDLLVAFWIINSSSSVEHPCGYLTPHIVKLESESPKRTISASGGLGPLYTLLSLLFSSLLSVSTLSLIIPGEEEALSPNGGAKQ
Subjt:  MALICMKVPTSIRNALEDLLVAFWIINSSSSVEHPCGYLTPHIVKLESESPKRTISASGGLGPLYTLLSLLFSSLLSVSTLSLIIPGEEEALSPNGGAKQ

Query:  CNGVSKTRILVADQGQDDDEKYE
        CNGVSKTRILVADQGQDDDEKYE
Subjt:  CNGVSKTRILVADQGQDDDEKYE
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTCATCTGCATGAAGGTCCCCACCTCCATCAGGAATGCTCTCGAGGACCTTCTCGTGGCCTTTTGGATAATAAACTCCAGTTCATCGGTCGAGCATCCATGTGG
CTACCTCACCCCTCACATTGTGAAGCTTGAAAGTGAAAGCCCAAAGAGGACAATATCGGCTAGCGGTGGCCTTGGGCCGTTATACACATTGCTCTCATTGCTCTTCAGTT
CCTTGCTTTCTGTTTCAACTCTCTCCCTCATCATACCTGGAGAAGAGGAAGCCCTTTCGCCCAATGGGGGTGCCAAACAATGCAACGGAGTCAGTAAAACGAGAATTCTT
GTTGCAGATCAAGGACAAGATGATGATGAAAAATATGAATGA
mRNA sequenceShow/hide mRNA sequence
TTTATTCATTCGGAAATATCGGAGGCGTCTTTTCTCGTCCAAATGAAAGAGCCTAAAATGGAAGAGACGTCTTTAGTTTCTGCAGTTTGATCACGAAATGCTCGGCTGCA
TATTGAGATAGTGCGTCGAGAACATAAGGCGATCAGTTGAGATCCTCACCGATAGAAAAAGATGGCAGTTTGTTTAATGATAGTGACGTAGCTTCTCCGACCCAAACCCA
GTGATGAAAATTGGCTTTAATATATACGTGGCTGTTCGCAGGGGAAAATGTCGTATTTGAGAGTTGTTCATAAGAATTGCTTCTATGCAGATTGGAATGGGAAGCAGAAA
TGGCTCTCATCTGCATGAAGGTCCCCACCTCCATCAGGAATGCTCTCGAGGACCTTCTCGTGGCCTTTTGGATAATAAACTCCAGTTCATCGGTCGAGCATCCATGTGGC
TACCTCACCCCTCACATTGTGAAGCTTGAAAGTGAAAGCCCAAAGAGGACAATATCGGCTAGCGGTGGCCTTGGGCCGTTATACACATTGCTCTCATTGCTCTTCAGTTC
CTTGCTTTCTGTTTCAACTCTCTCCCTCATCATACCTGGAGAAGAGGAAGCCCTTTCGCCCAATGGGGGTGCCAAACAATGCAACGGAGTCAGTAAAACGAGAATTCTTG
TTGCAGATCAAGGACAAGATGATGATGAAAAATATGAATGA
Protein sequenceShow/hide protein sequence
MALICMKVPTSIRNALEDLLVAFWIINSSSSVEHPCGYLTPHIVKLESESPKRTISASGGLGPLYTLLSLLFSSLLSVSTLSLIIPGEEEALSPNGGAKQCNGVSKTRIL
VADQGQDDDEKYE