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Carg13191 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13191
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPatatin
Genome locationCarg_Chr04:2910059..2914768
RNA-Seq ExpressionCarg13191
SyntenyCarg13191
Gene Ontology termsGO:0019433 - triglyceride catabolic process (biological process)
GO:0055088 - lipid homeostasis (biological process)
GO:0005773 - vacuole (cellular component)
GO:0005811 - lipid droplet (cellular component)
GO:0016020 - membrane (cellular component)
GO:0004806 - triglyceride lipase activity (molecular function)
GO:0045735 - nutrient reservoir activity (molecular function)
InterPro domainsIPR033562 - Patatin-like phospholipase domain-containing protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600351.1 Patatin-like phospholipase domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]5.2e-2696.83Show/hide
Query:  APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
        APRPVTVFRNRL  IDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
Subjt:  APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
KAG6600378.1 hypothetical protein SDJN03_05611, partial [Cucurbita argyrosperma subsp. sororia]3.3e-2898.41Show/hide
Query:  APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
        APRPVTVFRN+LLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
Subjt:  APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
KAG7031039.1 hypothetical protein SDJN02_05078, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-53100Show/hide
Query:  MKSRAPRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPREFSLIKLLHVLHHISFSTGLVEDERLVEDAVFKL
        MKSRAPRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPREFSLIKLLHVLHHISFSTGLVEDERLVEDAVFKL
Subjt:  MKSRAPRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPREFSLIKLLHVLHHISFSTGLVEDERLVEDAVFKL

Query:  YFCI
        YFCI
Subjt:  YFCI
XP_022943045.1 patatin-like phospholipase domain-containing protein 2 [Cucurbita moschata]5.2e-2696.83Show/hide
Query:  APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
        APRPVTVFRNRL  IDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
Subjt:  APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
XP_022988780.1 uncharacterized protein LOC111486017 [Cucurbita maxima]1.2e-2796.83Show/hide
Query:  APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
        APRPVTVFRNRL R+DGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
Subjt:  APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
TrEMBL top hitse value%identityAlignment
A0A0A0L746 Patatin7.3e-2695.24Show/hide
Query:  APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
        APRPVTVFRNRL  IDGGLTLFMPPTSASQTVRVCAFPA+RLGFEGIGISPDCNPENRAGPRE
Subjt:  APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
A0A1S3C2I5 Patatin7.3e-2695.24Show/hide
Query:  APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
        APRPVTVFRNRL  IDGGLTLFMPPTSASQTVRVCAFPA+RLGFEGIGISPDCNPENRAGPRE
Subjt:  APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
A0A5A7T6F4 Patatin7.3e-2695.24Show/hide
Query:  APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
        APRPVTVFRNRL  IDGGLTLFMPPTSASQTVRVCAFPA+RLGFEGIGISPDCNPENRAGPRE
Subjt:  APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
A0A6J1FXB2 Patatin2.5e-2696.83Show/hide
Query:  APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
        APRPVTVFRNRL  IDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
Subjt:  APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
A0A6J1JKJ0 uncharacterized protein LOC1114860176.0e-2896.83Show/hide
Query:  APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
        APRPVTVFRNRL R+DGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
Subjt:  APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G33270.1 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein8.6e-1966.67Show/hide
Query:  APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
        APRP T+FRNRL  +DGGLTLFMPPT+A++TVRVCAF A+    +GI I PDCNP NRA  R+
Subjt:  APRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPRE
AT1G33270.2 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein2.0e-0775Show/hide
Query:  APRPVTVFRNRLLRIDGGLTLFMPPTSASQTV
        APRP T+FRNRL  +DGGLTLFMPPT+A++TV
Subjt:  APRPVTVFRNRLLRIDGGLTLFMPPTSASQTV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGTAGAGCGCCAAGACCCGTCACAGTCTTCCGGAATAGACTACTACGCATTGATGGTGGTCTAACATTGTTCATGCCACCTACTTCTGCCTCTCAAACGGTGCG
TGTATGTGCTTTCCCCGCTACCCGATTGGGCTTTGAAGGGATTGGGATCAGTCCAGACTGCAACCCTGAAAACAGAGCAGGGCCCAGAGAGTTTAGTTTGATCAAACTCT
TGCATGTTCTGCATCATATCAGCTTTTCAACTGGGCTGGTGGAAGACGAAAGGCTGGTGGAGGACGCGGTCTTCAAACTCTACTTTTGTATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGTAGAGCGCCAAGACCCGTCACAGTCTTCCGGAATAGACTACTACGCATTGATGGTGGTCTAACATTGTTCATGCCACCTACTTCTGCCTCTCAAACGGTGCG
TGTATGTGCTTTCCCCGCTACCCGATTGGGCTTTGAAGGGATTGGGATCAGTCCAGACTGCAACCCTGAAAACAGAGCAGGGCCCAGAGAGTTTAGTTTGATCAAACTCT
TGCATGTTCTGCATCATATCAGCTTTTCAACTGGGCTGGTGGAAGACGAAAGGCTGGTGGAGGACGCGGTCTTCAAACTCTACTTTTGTATTTAA
Protein sequenceShow/hide protein sequence
MKSRAPRPVTVFRNRLLRIDGGLTLFMPPTSASQTVRVCAFPATRLGFEGIGISPDCNPENRAGPREFSLIKLLHVLHHISFSTGLVEDERLVEDAVFKLYFCI