; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13219 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13219
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUPF0161 protein At3g09310
Genome locationCarg_Chr07:5583605..5586096
RNA-Seq ExpressionCarg13219
SyntenyCarg13219
Gene Ontology termsNA
InterPro domainsIPR002696 - Putative membrane protein insertion efficiency factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595329.1 UPF0161 protein, partial [Cucurbita argyrosperma subsp. sororia]1.5e-74100Show/hide
Query:  MAVLPTTNCHKLQKPIFFAGGCQQRHRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCS
        MAVLPTTNCHKLQKPIFFAGGCQQRHRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCS
Subjt:  MAVLPTTNCHKLQKPIFFAGGCQQRHRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCS

Query:  EYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPR
        EYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPR
Subjt:  EYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPR

KAG7027339.1 UPF0161 protein [Cucurbita argyrosperma subsp. argyrosperma]1.1e-82100Show/hide
Query:  MAVLPTTNCHKLQKPIFFAGGCQQRHRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCS
        MAVLPTTNCHKLQKPIFFAGGCQQRHRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCS
Subjt:  MAVLPTTNCHKLQKPIFFAGGCQQRHRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCS

Query:  EYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
        EYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Subjt:  EYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED

XP_022931846.1 UPF0161 protein At3g09310 [Cucurbita moschata]2.0e-7996.71Show/hide
Query:  MAVLPTTNCHKL--QKPIFFAGGCQQRHRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNCHKL  Q PIFFAGGCQ+ HRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHKL--QKPIFFAGGCQQRHRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
        CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED

XP_022966116.1 UPF0161 protein At3g09310 [Cucurbita maxima]1.1e-8098Show/hide
Query:  MAVLPTTNCHKLQKPIFFAGGCQQRHRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCS
        MAVLPTTNCHKLQKPIFFAGGCQQ HRSAAAFSIRFNGQKLRRPLIISETRATSNSSAN DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRY+PTCS
Subjt:  MAVLPTTNCHKLQKPIFFAGGCQQRHRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCS

Query:  EYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
        EYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Subjt:  EYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED

XP_023518310.1 UPF0161 protein At3g09310 [Cucurbita pepo subsp. pepo]1.5e-7492.76Show/hide
Query:  MAVLPTTNCHKL--QKPIFFAGGCQQRHRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNCHKL  Q PIFFAG C Q  RSAAAFSIRFNGQKLRRPLIISE+RATSNSSAN DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHKL--QKPIFFAGGCQQRHRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
        CSEYSMQAYKKYGVAKGTILTAWRLCRCNP G SGFDPPRWFDEERLPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED

TrEMBL top hitse value%identityAlignment
A0A0A0KXI4 Uncharacterized protein4.4e-7290.13Show/hide
Query:  MAVLPTTNCHKLQ--KPIFFAGGCQQRHRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNCH  Q   PIFFAG C QR  SAA FSIRFN +KLRR LI+SETRATSNSSAN DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHKLQ--KPIFFAGGCQQRHRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
        CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED

A0A1S3BJN3 UPF0161 protein At3g093104.1e-7087.5Show/hide
Query:  MAVLPTTNCHKLQ--KPIFFAGGCQQRHRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNC+  Q   PIFF G C QR   AA FSIRFN +KLRRPLI+SETRATS SSAN DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHKLQ--KPIFFAGGCQQRHRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
        CSEYSMQAYKKYGVAKGT+LTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED

A0A5A7STY4 UPF0161 protein3.8e-6884.18Show/hide
Query:  MAVLPTTNCHKLQ--KPIFFAGGCQQRHRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNC+  Q   PIFF G C QR   AA FSIRFN +KLRRPLI+SETRATS SSAN DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHKLQ--KPIFFAGGCQQRHRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPL------GGSGFDPPRWFDEERLPEPED
        CSEYSMQAYKKYGVAKGT+LTAWRLCRCNPL      GGSGFDPPRWFDEERLPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPL------GGSGFDPPRWFDEERLPEPED

A0A6J1EUS1 UPF0161 protein At3g093109.7e-8096.71Show/hide
Query:  MAVLPTTNCHKL--QKPIFFAGGCQQRHRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
        MAVLPTTNCHKL  Q PIFFAGGCQ+ HRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT
Subjt:  MAVLPTTNCHKL--QKPIFFAGGCQQRHRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPT

Query:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
        CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Subjt:  CSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED

A0A6J1HNH0 UPF0161 protein At3g093105.2e-8198Show/hide
Query:  MAVLPTTNCHKLQKPIFFAGGCQQRHRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCS
        MAVLPTTNCHKLQKPIFFAGGCQQ HRSAAAFSIRFNGQKLRRPLIISETRATSNSSAN DQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRY+PTCS
Subjt:  MAVLPTTNCHKLQKPIFFAGGCQQRHRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCS

Query:  EYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
        EYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED
Subjt:  EYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED

SwissProt top hitse value%identityAlignment
B0K5N7 Putative membrane protein insertion efficiency factor7.3e-1653.33Show/hide
Query:  MLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDP
        ++K Y+R ISP+ P SCR+ PTCS+YS++A  KYG+ KG I++ WR+ RCNP    G+DP
Subjt:  MLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDP

B0K8I2 Putative membrane protein insertion efficiency factor7.3e-1653.33Show/hide
Query:  MLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDP
        ++K Y+R ISP+ P SCR+ PTCS+YS++A  KYG+ KG I++ WR+ RCNP    G+DP
Subjt:  MLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDP

B0T0Z8 Putative membrane protein insertion efficiency factor8.6e-1761.67Show/hide
Query:  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPP
        LK YK  +SP +   CRYLPTCSEY+ QA K +G  KG+ L   R+CRCNPLGGSG+DPP
Subjt:  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPP

Q2S3T2 Putative membrane protein insertion efficiency factor2.7e-1852.17Show/hide
Query:  LSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEE
        + +++ Y+  +SP L  +CR+ PTCS Y++QA+++YG  KG +LT  RL RC+P GG G+DPPRWFDEE
Subjt:  LSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEE

Q9SR32 UPF0161 protein At3g093102.2e-3671.13Show/hide
Query:  ISETRATSNSSANGDQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDE
        +S     S       QDG E++++GVKAAL+ML+FYKREISP+LP SCRY+PTCSEYSM+AYKKYGV KGT+LT WRLCRCNPLGGSGFDPPRWF E
Subjt:  ISETRATSNSSANGDQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDE

Arabidopsis top hitse value%identityAlignment
AT3G09310.1 unknown protein1.6e-3771.13Show/hide
Query:  ISETRATSNSSANGDQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDE
        +S     S       QDG E++++GVKAAL+ML+FYKREISP+LP SCRY+PTCSEYSM+AYKKYGV KGT+LT WRLCRCNPLGGSGFDPPRWF E
Subjt:  ISETRATSNSSANGDQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTCTTCCCACCACAAATTGCCACAAACTCCAAAAACCGATCTTCTTCGCCGGCGGCTGCCAGCAAAGGCACCGTTCTGCTGCCGCCTTCAGTATTCGATTTAA
TGGCCAGAAGCTCCGTCGGCCGCTCATCATAAGCGAAACGCGCGCCACATCGAATTCAAGCGCGAACGGAGACCAAGATGGCGAAGTGGACAATCTGGGGGTTAAAGCTG
CATTATCCATGCTCAAATTCTACAAACGAGAAATCTCGCCGTTATTGCCAAATAGTTGTCGCTATTTACCTACATGTAGTGAGTATTCCATGCAAGCTTACAAGAAATAT
GGTGTTGCGAAGGGTACTATTTTGACTGCTTGGCGTCTCTGCCGCTGCAATCCCCTTGGTGGATCTGGGTTTGATCCTCCACGATGGTTTGATGAAGAAAGGTTGCCAGA
ACCAGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
GTCTGCAGCACATTTGGAGGGGACTGACATGGCGGTTCTTCCCACCACAAATTGCCACAAACTCCAAAAACCGATCTTCTTCGCCGGCGGCTGCCAGCAAAGGCACCGTT
CTGCTGCCGCCTTCAGTATTCGATTTAATGGCCAGAAGCTCCGTCGGCCGCTCATCATAAGCGAAACGCGCGCCACATCGAATTCAAGCGCGAACGGAGACCAAGATGGC
GAAGTGGACAATCTGGGGGTTAAAGCTGCATTATCCATGCTCAAATTCTACAAACGAGAAATCTCGCCGTTATTGCCAAATAGTTGTCGCTATTTACCTACATGTAGTGA
GTATTCCATGCAAGCTTACAAGAAATATGGTGTTGCGAAGGGTACTATTTTGACTGCTTGGCGTCTCTGCCGCTGCAATCCCCTTGGTGGATCTGGGTTTGATCCTCCAC
GATGGTTTGATGAAGAAAGGTTGCCAGAACCAGAAGATTGACAATTTCAAATACTGCATAGTAATTGGTTGTATTGGCTAATGTGGTTGATCGTTGTGCTGTTTGGGGGA
TGTTTGGGAGCTAATGCCCTGTGCATAGTGGATTGTTGTAGAAAGTAACCTGTTGTGCTGTTTGGGGGATCTTTGGGAGCTAATGCCCTGTGCATAGTGGATTGTTGTAG
AAAGTAACCTGTTATACAAATTACATTCAATGATTTTGATTACTCTCATATTCCAACCTCTAATACTTTGATAATGTATATATATGGGGTAACTGTACCGGTACAAGTCT
ATTGCGAGTAGATATTATTCTTTTTGAGCTTTTCCTTCCGGACTTCCTCTCAAAGTTTTAAAATATGAGAGGTTTCTATACTCTTATAAAGAATATTTTGTTTCTCTCCA
ACCAATATAGGATCTCACAATCCACCCCCTTTGGTGGCCGGCATCCTTCTTGACACTCGTTCCTCTTTCCAATTGATA
Protein sequenceShow/hide protein sequence
MAVLPTTNCHKLQKPIFFAGGCQQRHRSAAAFSIRFNGQKLRRPLIISETRATSNSSANGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKY
GVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLPEPED