; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13228 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13228
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLegume-specific protein
Genome locationCarg_Chr07:5645033..5645314
RNA-Seq ExpressionCarg13228
SyntenyCarg13228
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AGS78082.1 legume-specific protein [Aeschynomene pratensis]2.2e-0455.68Show/hide
Query:  MEGLIPFVYKAIVEFRNGNNNQT-MWCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSSSSSSSSSSSDSVLISGSGVDQSP
        MEGLIPFVYKAI++++NGN      W C+SP S SY RLPGD          + +S S+S+ SS+S+SSSSSSS  VL+S SGV QSP
Subjt:  MEGLIPFVYKAIVEFRNGNNNQT-MWCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSSSSSSSSSSSDSVLISGSGVDQSP

CAA2615271.1 unnamed protein product [Spirodela intermedia]1.7e-0457.14Show/hide
Query:  MEGLIPFVYKAIVEFRNGNNNQTMWCCDSPSSASYQRLPGDDDELHNIN
        MEGLIPFVY+AIV+++N +   T W  DSP S SY RLPGD   L  +N
Subjt:  MEGLIPFVYKAIVEFRNGNNNQTMWCCDSPSSASYQRLPGDDDELHNIN

KAG6595338.1 hypothetical protein SDJN03_11891, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3393.55Show/hide
Query:  MEGLIPFVYKAIVEFRNGNNNQTMWCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSSSSSSSSSSSDSVLISGSGVDQSPLCNGGT
        MEGLIPFVYKAIVEFRNGNN+QTMWCCDSPSSASYQRLPGDDDELHNINGA     SSSSSSSSSSSSSSSSSDSVLISGSGVDQSPLCNGGT
Subjt:  MEGLIPFVYKAIVEFRNGNNNQTMWCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSSSSSSSSSSSDSVLISGSGVDQSPLCNGGT

KAG7027348.1 hypothetical protein SDJN02_11360, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-37100Show/hide
Query:  MEGLIPFVYKAIVEFRNGNNNQTMWCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSSSSSSSSSSSDSVLISGSGVDQSPLCNGGT
        MEGLIPFVYKAIVEFRNGNNNQTMWCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSSSSSSSSSSSDSVLISGSGVDQSPLCNGGT
Subjt:  MEGLIPFVYKAIVEFRNGNNNQTMWCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSSSSSSSSSSSDSVLISGSGVDQSPLCNGGT

PSR87892.1 Zinc finger protein [Actinidia chinensis var. chinensis]2.2e-0461.9Show/hide
Query:  MEGLIPFVYKAIVEFRN-GNNNQTMWCCDSPSSASYQRLPGD
        MEGLIPFVY+AIV+++N G      W  +SP SASY RLPGD
Subjt:  MEGLIPFVYKAIVEFRN-GNNNQTMWCCDSPSSASYQRLPGD

TrEMBL top hitse value%identityAlignment
A0A0A0L2A8 Uncharacterized protein7.0e-0444.04Show/hide
Query:  MEGLIPFVYKAIVEFRNGN---NNQTM------WCCDS-----PSSAS-----YQRLPGDDDELHNINGASSSSSSSSSSSSSSSSSSSSSSDSVLISGS
        MEGLIPF+YKAI++++NGN   NN  M      W CD+     PSS+S     Y RL GDD +  N N     ++++   SSSSSSS+ + + SV+IS +
Subjt:  MEGLIPFVYKAIVEFRNGN---NNQTM------WCCDS-----PSSAS-----YQRLPGDDDELHNINGASSSSSSSSSSSSSSSSSSSSSSDSVLISGS

Query:  GVDQSPLCN
           QSPLC+
Subjt:  GVDQSPLCN

A0A444ZNG9 Uncharacterized protein9.2e-0454.29Show/hide
Query:  MEGLIPFVYKAIVEFRNGNNN--QTMWCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSSSSSS
        MEGLIPFVYKAI++++ GN       W CDSP S SY RLPGD     N   AS+SS +   SSSS  SS
Subjt:  MEGLIPFVYKAIVEFRNGNNN--QTMWCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSSSSSS

S5VRI4 Legume-specific protein1.1e-0455.68Show/hide
Query:  MEGLIPFVYKAIVEFRNGNNNQT-MWCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSSSSSSSSSSSDSVLISGSGVDQSP
        MEGLIPFVYKAI++++NGN      W C+SP S SY RLPGD          + +S S+S+ SS+S+SSSSSSS  VL+S SGV QSP
Subjt:  MEGLIPFVYKAIVEFRNGNNNQT-MWCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSSSSSSSSSSSDSVLISGSGVDQSP

S5VRI7 Legume-specific protein1.1e-0455.68Show/hide
Query:  MEGLIPFVYKAIVEFRNGNNNQT-MWCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSSSSSSSSSSSDSVLISGSGVDQSP
        MEGLIPFVYKAI++++NGN      W C+SP S SY RLPGD          + +S S+S+ SS+S+SSSSSSS  VL+S SGV QSP
Subjt:  MEGLIPFVYKAIVEFRNGNNNQT-MWCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSSSSSSSSSSSDSVLISGSGVDQSP

V7AMG4 Uncharacterized protein9.2e-0450.55Show/hide
Query:  MEGLIPFVYKAIVEFRNGNNNQTM-WCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSSSSSSSSSSSDSVLISGSGVDQSPLCN
        MEGLIPFVYKAI+++RNG     + W CDSP S SY +LPGD         ASS   S    SSSSSSSS  +S +  I  S   QSP C+
Subjt:  MEGLIPFVYKAIVEFRNGNNNQTM-WCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSSSSSSSSSSSDSVLISGSGVDQSPLCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGTCTCATTCCATTTGTTTACAAAGCCATTGTAGAGTTCAGAAATGGCAATAATAACCAAACCATGTGGTGCTGTGACTCTCCTTCTTCAGCTTCATATCAAAG
ACTCCCAGGCGATGATGATGAGCTACACAATATCAATGGGGCCTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGAGTG
ACAGTGTCTTAATTTCTGGCTCTGGGGTTGATCAATCGCCGCTGTGTAATGGAGGAACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGTCTCATTCCATTTGTTTACAAAGCCATTGTAGAGTTCAGAAATGGCAATAATAACCAAACCATGTGGTGCTGTGACTCTCCTTCTTCAGCTTCATATCAAAG
ACTCCCAGGCGATGATGATGAGCTACACAATATCAATGGGGCCTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGAGTG
ACAGTGTCTTAATTTCTGGCTCTGGGGTTGATCAATCGCCGCTGTGTAATGGAGGAACCTAG
Protein sequenceShow/hide protein sequence
MEGLIPFVYKAIVEFRNGNNNQTMWCCDSPSSASYQRLPGDDDELHNINGASSSSSSSSSSSSSSSSSSSSSSDSVLISGSGVDQSPLCNGGT