; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13254 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13254
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRING/FYVE/PHD zinc finger superfamily protein
Genome locationCarg_Chr07:5858833..5859881
RNA-Seq ExpressionCarg13254
SyntenyCarg13254
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR011016 - Zinc finger, RING-CH-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595366.1 hypothetical protein SDJN03_11919, partial [Cucurbita argyrosperma subsp. sororia]7.5e-8899.39Show/hide
Query:  MAALETAGVDLEEGGRGGDGGRGAEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNVGVHEL
        MAALETAGVDLEEGGRGGDGGR AEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNVGVHEL
Subjt:  MAALETAGVDLEEGGRGGDGGRGAEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNVGVHEL

Query:  EQMEQLHEFNNGTLSTTTVAASVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS
        EQMEQLHEFNNGTLSTTTVAASVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS
Subjt:  EQMEQLHEFNNGTLSTTTVAASVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS

KAG7027374.1 hypothetical protein SDJN02_11386 [Cucurbita argyrosperma subsp. argyrosperma]8.8e-89100Show/hide
Query:  MAALETAGVDLEEGGRGGDGGRGAEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNVGVHEL
        MAALETAGVDLEEGGRGGDGGRGAEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNVGVHEL
Subjt:  MAALETAGVDLEEGGRGGDGGRGAEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNVGVHEL

Query:  EQMEQLHEFNNGTLSTTTVAASVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS
        EQMEQLHEFNNGTLSTTTVAASVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS
Subjt:  EQMEQLHEFNNGTLSTTTVAASVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS

XP_022151515.1 uncharacterized protein LOC111019441, partial [Momordica charantia]8.1e-5871.52Show/hide
Query:  MAALETAG-VDLEEGGRGGDGGRGAEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNV-GVH
        +AA++T G  DLE+G     G R  EA      +ERDCRICHLGLES+S ECG  IELGCSCKNDL AAHKHCAEAWFKIRGNKTCEICHS+V NV G H
Subjt:  MAALETAG-VDLEEGGRGGDGGRGAEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNV-GVH

Query:  ELEQMEQLHEFNNGTLSTTTVAASVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS
        E+E +EQL E NN T+STTTVA SV   P+GGR FWQVHRVLNFLLAC+VFAFVISWLFHFN+ S
Subjt:  ELEQMEQLHEFNNGTLSTTTVAASVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS

XP_023517920.1 uncharacterized protein LOC111781512 isoform X1 [Cucurbita pepo subsp. pepo]4.2e-8396.95Show/hide
Query:  MAALETAGVDLEEGGRGGDGGRGAEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNV-GVHE
        MAALETAGVDLEEGGRGG GGR AEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNV GVHE
Subjt:  MAALETAGVDLEEGGRGGDGGRGAEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNV-GVHE

Query:  LEQMEQLHEFNNGTLSTTTVAASVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS
        LEQMEQLHE NNGTLSTTTVAASVAA PDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS
Subjt:  LEQMEQLHEFNNGTLSTTTVAASVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS

XP_038883458.1 uncharacterized protein LOC120074413 [Benincasa hispida]6.0e-6176.51Show/hide
Query:  MAALETAGVDLEEGGRGGDGGRGAEAG-EVKVHS-ERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNV-GV
        MAALETAG DLE+G R     RG+  G EVKV++ ERDCRICHLGL SNS+E G  IELGC CKNDL+ AHKHCAEAWFKIRGNKTCEICHSIV+NV  V
Subjt:  MAALETAGVDLEEGGRGGDGGRGAEAG-EVKVHS-ERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNV-GV

Query:  HELEQMEQLHEFNNGTLSTTTVAASVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS
         E EQ EQLHE NNGT+ST TVAASVAA+P GGR FW VHRVLNFLLAC+VFAFVISWLFHFN+ S
Subjt:  HELEQMEQLHEFNNGTLSTTTVAASVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS

TrEMBL top hitse value%identityAlignment
A0A0B0MSH9 E3 ubiquitin-protein ligase MARCH22.0e-4670.42Show/hide
Query:  AGEVKVH---SERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQN-VGVHELEQMEQLHEFNNGTLSTTTVAA
        A E+K+H    E+DCRICHLGLESNS E G  IELGCSCK+DLAAAHKHCAEAWFKIRGNKTCEICHSI +N VGV+E+E  EQ +E N+   ST T A 
Subjt:  AGEVKVH---SERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQN-VGVHELEQMEQLHEFNNGTLSTTTVAA

Query:  SVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS
        S AAS    R FW  HR LNFLLAC+VFAFVISWLFHFN+ S
Subjt:  SVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS

A0A1S3B5A7 uncharacterized protein LOC1034863391.2e-4670.71Show/hide
Query:  EVKVHS---ERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNV-GVHELEQMEQLHEFNNGTLSTTTVAASV
        E+KVHS   ERDCRICHLGLESNS E G  IELGCSCK+DLAAAHKHCAE WFKI+GNKTCEICHSI +N+ G +E+E  EQ +E NN + STTTVAAS+
Subjt:  EVKVHS---ERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNV-GVHELEQMEQLHEFNNGTLSTTTVAASV

Query:  AASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS
         +S      FW+ HR LNFLLAC+VFAFVISWLFHFN+ S
Subjt:  AASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS

A0A2P5YEN9 RING-CH-type domain-containing protein2.0e-4670.42Show/hide
Query:  AGEVKVH---SERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQN-VGVHELEQMEQLHEFNNGTLSTTTVAA
        A E+K+H    E+DCRICHLGLESNS E G  IELGCSCK+DLAAAHKHCAEAWFKIRGNKTCEICHSI +N VGV+E+E  EQ +E N+   ST T A 
Subjt:  AGEVKVH---SERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQN-VGVHELEQMEQLHEFNNGTLSTTTVAA

Query:  SVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS
        S AAS    R FW  HR LNFLLAC+VFAFVISWLFHFN+ S
Subjt:  SVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS

A0A5D2P4V3 RING-CH-type domain-containing protein2.0e-4670.42Show/hide
Query:  AGEVKVH---SERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQN-VGVHELEQMEQLHEFNNGTLSTTTVAA
        A E+K+H    E+DCRICHLGLESNS E G  IELGCSCK+DLAAAHKHCAEAWFKIRGNKTCEICHSI +N VGV+E+E  EQ +E N+   ST T A 
Subjt:  AGEVKVH---SERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQN-VGVHELEQMEQLHEFNNGTLSTTTVAA

Query:  SVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS
        S AAS    R FW  HR LNFLLAC+VFAFVISWLFHFN+ S
Subjt:  SVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS

A0A6J1DBE4 uncharacterized protein LOC1110194413.9e-5871.52Show/hide
Query:  MAALETAG-VDLEEGGRGGDGGRGAEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNV-GVH
        +AA++T G  DLE+G     G R  EA      +ERDCRICHLGLES+S ECG  IELGCSCKNDL AAHKHCAEAWFKIRGNKTCEICHS+V NV G H
Subjt:  MAALETAG-VDLEEGGRGGDGGRGAEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNV-GVH

Query:  ELEQMEQLHEFNNGTLSTTTVAASVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS
        E+E +EQL E NN T+STTTVA SV   P+GGR FWQVHRVLNFLLAC+VFAFVISWLFHFN+ S
Subjt:  ELEQMEQLHEFNNGTLSTTTVAASVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G37950.1 RING/FYVE/PHD zinc finger superfamily protein1.1e-3151.82Show/hide
Query:  ERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNV-GVHEL--EQMEQLHEFNNGTLSTTTVAASVAASPDGG
        E+DCRICHLG+E++    G AIELGCSCK+DLA AH+ CAE WFKI+G+KTCEIC S+ +NV G +E+    ME+  E  NG           AA   GG
Subjt:  ERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNV-GVHEL--EQMEQLHEFNNGTLSTTTVAASVAASPDGG

Query:  ----RRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS
               WQ  RV+N +LAC+VF F ISW+FHF++ S
Subjt:  ----RRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS

AT5G01070.1 RING/FYVE/PHD zinc finger superfamily protein1.9e-1760.34Show/hide
Query:  AGEVKVHSERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNK
        +G ++   E+DCRICHLGLES+  ECG  + LGCSCK+DL   HK CA+ WFKI+GNK
Subjt:  AGEVKVHSERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNK

AT5G01070.2 RING/FYVE/PHD zinc finger superfamily protein2.7e-3551.45Show/hide
Query:  AGEVKVHSERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNVGVHELEQMEQLHEFNNGTLSTTTVAASVAA
        +G ++   E+DCRICHLGLES+  ECG  + LGCSCK+DL   HK CA+ WFKI+GNKTCEIC SI QN    + E  +   E N   +        VA 
Subjt:  AGEVKVHSERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNVGVHELEQMEQLHEFNNGTLSTTTVAASVAA

Query:  SPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS
        S    RR  + +R LNFLL C+V AFVISW FHFN+ S
Subjt:  SPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS

AT5G05830.1 RING/FYVE/PHD zinc finger superfamily protein4.0e-3961.36Show/hide
Query:  SERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQN-VGVHELEQMEQLHEFNNGTLSTTTVAASVAASPDGGR
        SERDCRICH+ L++ + E G  IELGCSCK DLAAAHKHCAE WFKI+GNK CE+C SI  N VG  E+E  E  +E N   +   T+  S     + GR
Subjt:  SERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQN-VGVHELEQMEQLHEFNNGTLSTTTVAASVAASPDGGR

Query:  RFWQVHRVLNFLLACIVFAFVISWLFHFNMRS
         FWQ HR LNFLLAC+VFAFVISWLFHFN+ S
Subjt:  RFWQVHRVLNFLLACIVFAFVISWLFHFNMRS

AT5G59000.1 RING/FYVE/PHD zinc finger superfamily protein2.6e-2236.36Show/hide
Query:  VDLEEGG------RGGDGG-------RGAEAGEVKVHSERDCRICHLGLESNSSE-------------------------------CGTAIELGCSCKND
        VDLE GG      +   GG       R     + K    RDCRICHL LE+N                                   G  ++LGCSCK D
Subjt:  VDLEEGG------RGGDGG-------RGAEAGEVKVHSERDCRICHLGLESNSSE-------------------------------CGTAIELGCSCKND

Query:  LAAAHKHCAEAWFKIRGNKTCEICHSIVQNVGVHELEQMEQLHEFNNGTLST-TTVAASVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNM
        L  AH  CAE WFKI+GN TCEIC ++  NV   +             T ST +  AA  + +    R  W    V+NFLLA +VFAFV+SWLFHF +
Subjt:  LAAAHKHCAEAWFKIRGNKTCEICHSIVQNVGVHELEQMEQLHEFNNGTLST-TTVAASVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTTTGGAGACAGCCGGAGTTGATTTGGAGGAAGGGGGTCGTGGTGGTGACGGCGGACGGGGGGCGGAGGCGGGTGAAGTGAAGGTGCATTCAGAGAGGGATTG
TAGGATTTGCCATTTGGGGTTGGAGAGCAACAGTAGTGAGTGTGGAACTGCAATTGAATTGGGCTGTTCTTGTAAGAATGATTTGGCTGCTGCCCACAAGCATTGTGCTG
AAGCTTGGTTCAAAATCAGAGGAAACAAGACGTGTGAGATATGCCATTCTATTGTACAAAATGTAGGAGTACATGAACTCGAACAAATGGAGCAACTCCACGAGTTTAAC
AATGGGACACTATCGACAACCACGGTTGCAGCATCGGTGGCTGCTTCTCCCGATGGTGGTCGGAGGTTTTGGCAGGTTCATCGAGTCCTGAATTTTCTTCTTGCTTGTAT
TGTATTTGCTTTTGTCATATCTTGGTTGTTTCATTTCAATATGCGGTCATAA
mRNA sequenceShow/hide mRNA sequence
AACCCATCTTCCTTTATTCTCTTCTGTGGCTAAATTTCATGGCTTTTTGAGTTTCTGATTCAGGGGTTTCTTAAAAATGGCGGCTTTGGAGACAGCCGGAGTTGATTTGG
AGGAAGGGGGTCGTGGTGGTGACGGCGGACGGGGGGCGGAGGCGGGTGAAGTGAAGGTGCATTCAGAGAGGGATTGTAGGATTTGCCATTTGGGGTTGGAGAGCAACAGT
AGTGAGTGTGGAACTGCAATTGAATTGGGCTGTTCTTGTAAGAATGATTTGGCTGCTGCCCACAAGCATTGTGCTGAAGCTTGGTTCAAAATCAGAGGAAACAAGACGTG
TGAGATATGCCATTCTATTGTACAAAATGTAGGAGTACATGAACTCGAACAAATGGAGCAACTCCACGAGTTTAACAATGGGACACTATCGACAACCACGGTTGCAGCAT
CGGTGGCTGCTTCTCCCGATGGTGGTCGGAGGTTTTGGCAGGTTCATCGAGTCCTGAATTTTCTTCTTGCTTGTATTGTATTTGCTTTTGTCATATCTTGGTTGTTTCAT
TTCAATATGCGGTCATAAAACGGTTGTGTACAAAGAAAGGTTTCGATCTTTAAGTTAGGTCTATAAATTTT
Protein sequenceShow/hide protein sequence
MAALETAGVDLEEGGRGGDGGRGAEAGEVKVHSERDCRICHLGLESNSSECGTAIELGCSCKNDLAAAHKHCAEAWFKIRGNKTCEICHSIVQNVGVHELEQMEQLHEFN
NGTLSTTTVAASVAASPDGGRRFWQVHRVLNFLLACIVFAFVISWLFHFNMRS