; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13257 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13257
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription termination/antitermination protein NusG
Genome locationCarg_Chr07:5872841..5876029
RNA-Seq ExpressionCarg13257
SyntenyCarg13257
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR006645 - NusG, N-terminal
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR036735 - NusG, N-terminal domain superfamily
IPR043425 - NusG-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595370.1 hypothetical protein SDJN03_11923, partial [Cucurbita argyrosperma subsp. sororia]8.4e-176100Show/hide
Query:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL
        MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL
Subjt:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL

Query:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
        GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
Subjt:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN

Query:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTVG
        KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTVG
Subjt:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTVG

Query:  FTLFGKETLVELDIGDIIVETK
        FTLFGKETLVELDIGDIIVETK
Subjt:  FTLFGKETLVELDIGDIIVETK

XP_022931956.1 uncharacterized protein LOC111438223 [Cucurbita moschata]7.1e-17599.38Show/hide
Query:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL
        MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL
Subjt:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL

Query:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
        GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
Subjt:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN

Query:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTVG
        KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLET+LDTNGTTATKHKGRPKKAVNTLSPGSTVRV+SGTFAEFEGSLKKVNRKSKKVTVG
Subjt:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTVG

Query:  FTLFGKETLVELDIGDIIVETK
        FTLFGKETLVELDIGDIIVETK
Subjt:  FTLFGKETLVELDIGDIIVETK

XP_022966103.1 uncharacterized protein LOC111465889 [Cucurbita maxima]6.3e-17197.83Show/hide
Query:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL
        MAC LLTWTTL LRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYL+KL
Subjt:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL

Query:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
        GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
Subjt:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN

Query:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTVG
        KPKPVSQDDMEAIFKEAKEEQERHDQAFLEK+KEQAPNPSVLET LDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKS KVTVG
Subjt:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTVG

Query:  FTLFGKETLVELDIGDIIVETK
        FTLFGKETLV LDIGDIIVETK
Subjt:  FTLFGKETLVELDIGDIIVETK

XP_023518856.1 uncharacterized protein LOC111782252 [Cucurbita pepo subsp. pepo]1.3e-17198.14Show/hide
Query:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL
        MACGLLTWT LPLRS SFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL
Subjt:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL

Query:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
        GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
Subjt:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN

Query:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTVG
        KPKPVSQDDMEAIFKEAKE+QERHDQAFLEKEKEQAPNPSVLET+LDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKS KVTVG
Subjt:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTVG

Query:  FTLFGKETLVELDIGDIIVETK
        FTLFGKETLVELDIGDI VETK
Subjt:  FTLFGKETLVELDIGDIIVETK

XP_038880828.1 transcription termination/antitermination protein NusG isoform X1 [Benincasa hispida]5.3e-15488.62Show/hide
Query:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALET--AADDVLQLSARERRRLRNERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDYL
        MACGLL W+ + LRS SFP+LSFSLSS  RTQLSISA +ET  AADD+ QLSARERR+LRNERRE K TTNWREEVEERLCKKPKKEFA WTEKLNLDYL
Subjt:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALET--AADDVLQLSARERRRLRNERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDYL

Query:  AKLGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKR
        +KLGPQWWVMRV+RVRGQEIVERLARSLARNYPDLDFKIYYPSV EKRKLKNG+YTVKPKA+FPGSVFIRCIMNKE+HDFIRECDGVGGFVGAKVGNTKR
Subjt:  AKLGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKR

Query:  QINKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKV
        QINKPKPVS+ DMEAIFKEAKEEQERHDQAFLEKE+++APN S LET+LDTNGTTATK KGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKK+NRKS KV
Subjt:  QINKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKV

Query:  TVGFTLFGKETLVELDIGDIIVETK
        TVGFTLFGKETLV+LDIGDIIVETK
Subjt:  TVGFTLFGKETLVELDIGDIIVETK

TrEMBL top hitse value%identityAlignment
A0A0A0KZV1 NGN domain-containing protein6.3e-15387.12Show/hide
Query:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALET---AADDVLQLSARERRRLRNERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDY
        MACGLL W+++ L S SFP+LSFSLSSS RTQLS+SA++ET   AADD  QLS RERR+LRNERRE K TTNWREEVEERLC+KPKKEFANWTEKLNLDY
Subjt:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALET---AADDVLQLSARERRRLRNERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDY

Query:  LAKLGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTK
        LAKLGPQWWVMRV+RVR QEIVERLAR LARNYPDLDFKIYYPSV EKRKLKNG+YTV PKAVFPGSVFIRC+MNKE+HDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKK
        RQINKPKPVS+ DMEAIFKEAK+EQERHDQAFLEKE+E+APN S L+T+LDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKK+NRKS K
Subjt:  RQINKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKK

Query:  VTVGFTLFGKETLVELDIGDIIVETK
        VTVGFTLFGKETLV+LDIGDIIVETK
Subjt:  VTVGFTLFGKETLVELDIGDIIVETK

A0A1S3BKU2 transcription termination/antitermination protein NusG5.4e-15287.73Show/hide
Query:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALET---AADDVLQLSARERRRLRNERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDY
        MA GLL W+ + L S S P+LSFSLSSS RTQLSISA++ET   AADDV QLSAR+RR+LRNERRE K TTNWREEVEERLC+KPKKEFA WTEKLNLDY
Subjt:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALET---AADDVLQLSARERRRLRNERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDY

Query:  LAKLGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTK
        LAKLGPQWWVMRV+RVRGQEIVERLARSLARNYPDLDFKIYYPSV EKRKLKNG+YTVKPKAVFPGSVFIRC+MNKE+HDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKK
        RQINKPKPVS+ DMEAIFKEAKEEQERHDQAFLEKE+E+APN S L+T+LDTNGTTATKHKGR KKAVNTLSPGSTVRVASGTFAEFEGSLKK+NRKS K
Subjt:  RQINKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKK

Query:  VTVGFTLFGKETLVELDIGDIIVETK
        VTVGFTLFGKETLV+LDIGDIIVETK
Subjt:  VTVGFTLFGKETLVELDIGDIIVETK

A0A6J1DDH4 uncharacterized protein LOC1110194921.1e-14987.62Show/hide
Query:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALET-AADDVLQLSARERRRLRNERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDYLA
        MA GLL W+++ LRS SFP+LSFSLSSS  TQLSISAALET AADDV QLSARERRRLRNERRE K TTNWREEVEERLCKKPKKEFA+WTEKLNLDYLA
Subjt:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALET-AADDVLQLSARERRRLRNERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDYLA

Query:  KLGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQ
        KLGPQWWVMRV+RVRGQEIVERLARSLARNYPDLDFKIYYPSV EKR+LKNG+Y VKP+AVFPGSVFIRCIMNKE+HDFIRECDGVGGFVGAKVGNTKRQ
Subjt:  KLGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQ

Query:  INKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVT
        INKPKPVS+ DMEAIFKEAKEEQERHDQ FLEKE+E+APN ++ +T+LDTNGTTATK KGR KKAVN LSPGSTVRVASGTFAEFEGSLKK+NRKS KVT
Subjt:  INKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVT

Query:  VGFTLFGKETLVELDIGDIIVET
        VGFTLFGKETLV+LDIGDI+VET
Subjt:  VGFTLFGKETLVELDIGDIIVET

A0A6J1EV13 uncharacterized protein LOC1114382233.5e-17599.38Show/hide
Query:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL
        MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL
Subjt:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL

Query:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
        GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
Subjt:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN

Query:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTVG
        KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLET+LDTNGTTATKHKGRPKKAVNTLSPGSTVRV+SGTFAEFEGSLKKVNRKSKKVTVG
Subjt:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTVG

Query:  FTLFGKETLVELDIGDIIVETK
        FTLFGKETLVELDIGDIIVETK
Subjt:  FTLFGKETLVELDIGDIIVETK

A0A6J1HQX6 uncharacterized protein LOC1114658893.0e-17197.83Show/hide
Query:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL
        MAC LLTWTTL LRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYL+KL
Subjt:  MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKL

Query:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
        GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN
Subjt:  GPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQIN

Query:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTVG
        KPKPVSQDDMEAIFKEAKEEQERHDQAFLEK+KEQAPNPSVLET LDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKS KVTVG
Subjt:  KPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTVG

Query:  FTLFGKETLVELDIGDIIVETK
        FTLFGKETLV LDIGDIIVETK
Subjt:  FTLFGKETLVELDIGDIIVETK

SwissProt top hitse value%identityAlignment
P29397 Transcription termination/antitermination protein NusG1.1e-0825.9Show/hide
Query:  YTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGT
        Y  K + +FPG VF+  IMN E ++F+R    V GFV +          +P PV   +M  I + A                                G 
Subjt:  YTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGT

Query:  TATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTVGFTLFGKETLVELDIGDI
           + K +P K       G  V++ SG F +F G +K+++ + +++ V  T+FG+ET V L + ++
Subjt:  TATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTVGFTLFGKETLVELDIGDI

P35872 Transcription termination/antitermination protein NusG8.3e-0926.94Show/hide
Query:  DLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMN-----KEMHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSQDDMEAIFKEAKEEQERHD
        D  F++  P+       + G   V  K +FPG +FI+  +       E  + +R   G+ GFVGA +        +P P+S D++  I            
Subjt:  DLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMN-----KEMHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSQDDMEAIFKEAKEEQERHD

Query:  QAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTVGFTLFGKETLVELDIGDII
                            L+ +G    K      KA      G  VRV SG FA+F G++ ++N +  KV V  T+FG+ET VELD   ++
Subjt:  QAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTVGFTLFGKETLVELDIGDII

P65591 Transcription termination/antitermination protein NusG1.3e-0923.39Show/hide
Query:  LGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQI
        +  +W+V++      + +   L   +AR      F      V +   ++NG  T+  +  +PG V +   M  +    ++    V GF+G +        
Subjt:  LGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQI

Query:  NKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTV
        N+P P+SQ + E I ++         Q  +EK     P P V                            G  VRV  G FA+F G +++VN +  K+ V
Subjt:  NKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTV

Query:  GFTLFGKETLVELDIGDI
           +FG+ET VEL+   +
Subjt:  GFTLFGKETLVELDIGDI

P65592 Transcription termination/antitermination protein NusG1.3e-0923.39Show/hide
Query:  LGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQI
        +  +W+V++      + +   L   +AR      F      V +   ++NG  T+  +  +PG V +   M  +    ++    V GF+G +        
Subjt:  LGPQWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQI

Query:  NKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTV
        N+P P+SQ + E I ++         Q  +EK     P P V                            G  VRV  G FA+F G +++VN +  K+ V
Subjt:  NKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTV

Query:  GFTLFGKETLVELDIGDI
           +FG+ET VEL+   +
Subjt:  GFTLFGKETLVELDIGDI

Q06795 Transcription termination/antitermination protein NusG1.7e-0927.81Show/hide
Query:  DLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSQDDMEAIFKEAKEEQERHDQAFLE
        D  F++  P   E+  +KNG   V  K VFPG V +  +M  +    +R   GV GFVG+         +KP P+   + E I K    ++ + D  F  
Subjt:  DLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSQDDMEAIFKEAKEEQERHDQAFLE

Query:  KEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTVGFTLFGKETLVELDIGDI
        KE                                       TV+V  G FA F GS+++++    KV V   +FG+ET VEL+   I
Subjt:  KEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTVGFTLFGKETLVELDIGDI

Arabidopsis top hitse value%identityAlignment
AT3G09210.1 plastid transcriptionally active 133.4e-9055.03Show/hide
Query:  GLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKT-TNWREEVEERLCKKPKKEFANWTEKLNLDYLAKLGP
        GLL W+    RS   PS+   ++   +TQ SI+A +    +   QL+A+ERR+LRNERRE+K   +WREEVEE+L KKPKK +A WTE+LNLD LA+ GP
Subjt:  GLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKT-TNWREEVEERLCKKPKKEFANWTEKLNLDYLAKLGP

Query:  QWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQINKP
        QWW +RVSR+RG E  + LAR+LAR +P+++F +Y PSV  KRKLKNGS +VKPK VFPG +FIRCI+NKE+HD IR+ DGVGGF+G+KVGNTKRQINKP
Subjt:  QWWVMRVSRVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQINKP

Query:  KPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQ-------------APNPSVLETNLDT-------NGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAE
        +PV   D+EAIFK+AKE QE+ D  F E ++ +               N  V+ET  ++         T AT+ K + KK    L+ GSTVRV SGTFAE
Subjt:  KPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQ-------------APNPSVLETNLDT-------NGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAE

Query:  FEGSLKKVNRKSKKVTVGFTLFGKETLVELDIGDIIVE
        F G+LKK+NRK+ K TVGFTLFGKETLVE+DI +++ E
Subjt:  FEGSLKKVNRKSKKVTVGFTLFGKETLVELDIGDIIVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTGCGGGCTTCTGACTTGGACTACACTTCCTCTTCGCTCTCCCTCTTTCCCTTCCCTTTCCTTCTCTCTCTCTTCTTCCCTGCGCACCCAATTATCAATCTCTGC
CGCCCTCGAAACTGCCGCTGATGATGTCCTGCAGCTGTCGGCGCGGGAGAGGAGGAGGCTGAGGAACGAAAGGAGAGAGACGAAAACCACTAATTGGAGGGAAGAGGTGG
AAGAGAGGCTCTGCAAGAAGCCGAAGAAGGAATTTGCTAATTGGACTGAGAAGCTCAATCTTGATTACCTTGCTAAATTAGGTCCTCAATGGTGGGTTATGCGGGTCTCT
CGTGTTAGAGGCCAAGAAATTGTCGAACGCCTAGCTCGTTCTCTTGCTAGGAACTATCCTGACCTCGATTTCAAGATATATTACCCGTCTGTCCATGAGAAGAGGAAATT
AAAGAACGGTTCTTACACGGTTAAACCGAAAGCTGTTTTTCCTGGATCTGTATTTATAAGGTGTATCATGAACAAGGAGATGCATGACTTCATTAGAGAGTGTGATGGAG
TTGGAGGCTTTGTTGGTGCGAAGGTCGGAAACACGAAACGACAGATAAACAAACCAAAGCCAGTATCTCAAGACGACATGGAAGCAATTTTTAAAGAGGCAAAGGAAGAG
CAAGAAAGACATGACCAAGCTTTTCTAGAGAAAGAGAAAGAGCAAGCTCCGAACCCCAGCGTGCTCGAGACTAACTTAGATACTAACGGTACTACTGCCACAAAGCACAA
AGGAAGACCTAAAAAAGCTGTTAATACTTTATCTCCGGGGTCAACCGTTCGGGTCGCATCCGGGACTTTTGCAGAATTCGAAGGCTCTCTTAAGAAAGTGAACCGTAAGA
GTAAAAAGGTAACTGTGGGATTCACACTATTTGGGAAGGAAACCCTTGTAGAGCTTGACATTGGTGATATTATAGTCGAGACGAAATGA
mRNA sequenceShow/hide mRNA sequence
GCAACGACAAATGGGAGTCGCAATAACACCACCTATCGGCGTTATCATCACTGGTGGCTCCACACCCGAACCAGTAATCGAAAACTGGTTCCTGTGAAGACGATGGCCTG
CGGGCTTCTGACTTGGACTACACTTCCTCTTCGCTCTCCCTCTTTCCCTTCCCTTTCCTTCTCTCTCTCTTCTTCCCTGCGCACCCAATTATCAATCTCTGCCGCCCTCG
AAACTGCCGCTGATGATGTCCTGCAGCTGTCGGCGCGGGAGAGGAGGAGGCTGAGGAACGAAAGGAGAGAGACGAAAACCACTAATTGGAGGGAAGAGGTGGAAGAGAGG
CTCTGCAAGAAGCCGAAGAAGGAATTTGCTAATTGGACTGAGAAGCTCAATCTTGATTACCTTGCTAAATTAGGTCCTCAATGGTGGGTTATGCGGGTCTCTCGTGTTAG
AGGCCAAGAAATTGTCGAACGCCTAGCTCGTTCTCTTGCTAGGAACTATCCTGACCTCGATTTCAAGATATATTACCCGTCTGTCCATGAGAAGAGGAAATTAAAGAACG
GTTCTTACACGGTTAAACCGAAAGCTGTTTTTCCTGGATCTGTATTTATAAGGTGTATCATGAACAAGGAGATGCATGACTTCATTAGAGAGTGTGATGGAGTTGGAGGC
TTTGTTGGTGCGAAGGTCGGAAACACGAAACGACAGATAAACAAACCAAAGCCAGTATCTCAAGACGACATGGAAGCAATTTTTAAAGAGGCAAAGGAAGAGCAAGAAAG
ACATGACCAAGCTTTTCTAGAGAAAGAGAAAGAGCAAGCTCCGAACCCCAGCGTGCTCGAGACTAACTTAGATACTAACGGTACTACTGCCACAAAGCACAAAGGAAGAC
CTAAAAAAGCTGTTAATACTTTATCTCCGGGGTCAACCGTTCGGGTCGCATCCGGGACTTTTGCAGAATTCGAAGGCTCTCTTAAGAAAGTGAACCGTAAGAGTAAAAAG
GTAACTGTGGGATTCACACTATTTGGGAAGGAAACCCTTGTAGAGCTTGACATTGGTGATATTATAGTCGAGACGAAATGAGTGAATGTACTTTCTTGTCGATGGTAAGT
TTTCGAAATCACAAGGCACCATTTATCTTATCAACTCGAGCTGTATCATAGGTTTTTTTTCAACTTTGATGGAAAGTTCAGTGCCTCTTGGTATAATCAGTCAAAAAACC
ACACCCTGTTTCCTGTTCCATAAAGTACCAAGTGGTGAACAGAGGAGCTATCTAACCATTAGCCTTAATCAATTCATAATTTTCC
Protein sequenceShow/hide protein sequence
MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALETAADDVLQLSARERRRLRNERRETKTTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKLGPQWWVMRVS
RVRGQEIVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSQDDMEAIFKEAKEE
QERHDQAFLEKEKEQAPNPSVLETNLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSKKVTVGFTLFGKETLVELDIGDIIVETK