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Carg13290 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13290
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionjosephin-like protein
Genome locationCarg_Chr07:6130924..6131283
RNA-Seq ExpressionCarg13290
SyntenyCarg13290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595400.1 hypothetical protein SDJN03_11953, partial [Cucurbita argyrosperma subsp. sororia]3.9e-54100Show/hide
Query:  MSKIRSSRGVSLRSDEGTAKPTALQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRSECSKKASAATNFNRSHSVSDSMEESHRA
        MSKIRSSRGVSLRSDEGTAKPTALQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRSECSKKASAATNFNRSHSVSDSMEESHRA
Subjt:  MSKIRSSRGVSLRSDEGTAKPTALQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRSECSKKASAATNFNRSHSVSDSMEESHRA

Query:  EAVRDCIHFFNSSSSSSAL
        EAVRDCIHFFNSSSSSSAL
Subjt:  EAVRDCIHFFNSSSSSSAL

KAG6603596.1 hypothetical protein SDJN03_04205, partial [Cucurbita argyrosperma subsp. sororia]2.8e-3165.38Show/hide
Query:  SKIRSSRGVSLRSDEG-----TAKPTALQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRS----ECSKKASAA-----TNFNRS
        +K+ SSR VS  SD+G      AKP A  RNRKR+ITV WVFRLPKSGR  P SFLRR+GAKV KVLR VSL+KRS     CS  +S++     +NFNRS
Subjt:  SKIRSSRGVSLRSDEG-----TAKPTALQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRS----ECSKKASAA-----TNFNRS

Query:  HSVSDSMEESHRAEAVRDCIHFFNSSSSSS
        HSVS+SMEESHRAEAV+DCI+FFNSSSSS+
Subjt:  HSVSDSMEESHRAEAVRDCIHFFNSSSSSS

XP_022950374.1 josephin-like protein [Cucurbita moschata]4.7e-3166.4Show/hide
Query:  SKIRSSRGVSLRSDEG------TAKPTALQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRS---ECSKKASAATNFNRSHSVSD
        +K+ SSR VS  SD+G       AKP A  RNRKR+ITV WVFRLPKSGR  P SFLRR+GAKV KVLR VSL+KRS     S    + +NFNRSHSVS+
Subjt:  SKIRSSRGVSLRSDEG------TAKPTALQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRS---ECSKKASAATNFNRSHSVSD

Query:  SMEESHRAEAVRDCIHFFNSSSSSS
        SMEESHRAEAV+DCI+FFNSSSSS+
Subjt:  SMEESHRAEAVRDCIHFFNSSSSSS

XP_022977351.1 uncharacterized protein LOC111477703 [Cucurbita maxima]8.0e-3166.4Show/hide
Query:  SKIRSSRGVSLRSDEG----TAKPTALQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRS----ECSKKAS--AATNFNRSHSVS
        +K+ SSR VS  SD+G     AKP A  RNRKR+ITV WVF+LPKSGR  P SFLRR+GAKV KVLR VSL+KRS     CS  +S  + +NFNRSHSVS
Subjt:  SKIRSSRGVSLRSDEG----TAKPTALQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRS----ECSKKAS--AATNFNRSHSVS

Query:  DSMEESHRAEAVRDCIHFFNSSSSS
        +SMEESHRAEAV+DCI+FFNSSSS+
Subjt:  DSMEESHRAEAVRDCIHFFNSSSSS

XP_023518083.1 uncharacterized protein LOC111781626 [Cucurbita pepo subsp. pepo]5.3e-5195.73Show/hide
Query:  MSKIRSSRGVSLRSDEGTAKPTALQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRSECSKKASAATNFNRSHSVSDSMEESHRA
        MSKIRSSRGVSLRSDEGTAKPT LQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKV+R VSLKKRSECSKKASAATNFNRSHSVSDSMEESHRA
Subjt:  MSKIRSSRGVSLRSDEGTAKPTALQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRSECSKKASAATNFNRSHSVSDSMEESHRA

Query:  EAVRDCIHFFNSSSSSS
        EAV+DCIHFFNSSSSS+
Subjt:  EAVRDCIHFFNSSSSSS

TrEMBL top hitse value%identityAlignment
A0A061EQH2 Uncharacterized protein1.9e-1445.53Show/hide
Query:  RSSRGVSLRSDEGTAKPTALQR----------NRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRSECSKKASAATNFNRSHSVSDSM
        R+S+ VS  S +   +PT L +          NR+RV+  ++ FRL +S RFSP   LRR+GAKVA+ LR VS+++ S   K +S+++N  RS S+++S+
Subjt:  RSSRGVSLRSDEGTAKPTALQR----------NRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRSECSKKASAATNFNRSHSVSDSM

Query:  EESHRAEAVRDCIHFFNSSSSSS
         +SHRAEA+ DCI F NSSSS S
Subjt:  EESHRAEAVRDCIHFFNSSSSSS

A0A0A0L2K7 Uncharacterized protein1.1e-2865.32Show/hide
Query:  SKIRSSRGVSLRSDEGTAKPTALQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRSECSKKASAATN------FNRSHSVSDSME
        +K+ S R VS  SD+  A   A  R RKR I V WVFRLPKS RFSPE FLRR+GAK+AKVLR VSL+KRS  S  +S+  N      FNRSHSVSDSME
Subjt:  SKIRSSRGVSLRSDEGTAKPTALQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRSECSKKASAATN------FNRSHSVSDSME

Query:  ESHRAEAVRDCIHFFNSSSSSSAL
        ESHRAEAV+DCI FFNSS+SSSA+
Subjt:  ESHRAEAVRDCIHFFNSSSSSSAL

A0A6J1AQZ4 josephin-like protein2.1e-1344.72Show/hide
Query:  RSSRGVSLRSDEGTAKPTALQRN----------RKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRSECSKKASAATNFNRSHSVSDSM
        R+S+ VS  S +   +PT L ++          R+RV+  ++ FRL +S RFSP   LRR+GAKVA+ LR VS+ + S   K +S+++N  RS S+++S+
Subjt:  RSSRGVSLRSDEGTAKPTALQRN----------RKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRSECSKKASAATNFNRSHSVSDSM

Query:  EESHRAEAVRDCIHFFNSSSSSS
         +SHRAEA+ DCI F NSSSS S
Subjt:  EESHRAEAVRDCIHFFNSSSSSS

A0A6J1GFL9 josephin-like protein2.3e-3166.4Show/hide
Query:  SKIRSSRGVSLRSDEG------TAKPTALQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRS---ECSKKASAATNFNRSHSVSD
        +K+ SSR VS  SD+G       AKP A  RNRKR+ITV WVFRLPKSGR  P SFLRR+GAKV KVLR VSL+KRS     S    + +NFNRSHSVS+
Subjt:  SKIRSSRGVSLRSDEG------TAKPTALQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRS---ECSKKASAATNFNRSHSVSD

Query:  SMEESHRAEAVRDCIHFFNSSSSSS
        SMEESHRAEAV+DCI+FFNSSSSS+
Subjt:  SMEESHRAEAVRDCIHFFNSSSSSS

A0A6J1IJN3 uncharacterized protein LOC1114777033.9e-3166.4Show/hide
Query:  SKIRSSRGVSLRSDEG----TAKPTALQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRS----ECSKKAS--AATNFNRSHSVS
        +K+ SSR VS  SD+G     AKP A  RNRKR+ITV WVF+LPKSGR  P SFLRR+GAKV KVLR VSL+KRS     CS  +S  + +NFNRSHSVS
Subjt:  SKIRSSRGVSLRSDEG----TAKPTALQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRS----ECSKKAS--AATNFNRSHSVS

Query:  DSMEESHRAEAVRDCIHFFNSSSSS
        +SMEESHRAEAV+DCI+FFNSSSS+
Subjt:  DSMEESHRAEAVRDCIHFFNSSSSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G07300.1 josephin protein-related8.0e-0529.41Show/hide
Query:  EGTAKPTALQ--RNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRSECSKKASAATNFNRSHSVSDSMEESHRAEAVRDCIHFFNSS
        + +AK TA++    +    T     RLP+    +    ++ +G K AK LR V ++K+        ++ +      +     +SHR+EA+ DCI F NSS
Subjt:  EGTAKPTALQ--RNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRSECSKKASAATNFNRSHSVSDSMEESHRAEAVRDCIHFFNSS

Query:  SS
        SS
Subjt:  SS

AT3G09032.1 unknown protein9.5e-0636.63Show/hide
Query:  NRKRVITV-LWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKR-------------SECSKKASAATNFNRSHSVSDSMEESHRAEAVRDCIHFFNS
        +R+RV+ V +  F L  S   +    ++R+GA+ AK LR +S ++              S  S  +S+A    RS SV+++  ESHRAEA+ DCI F NS
Subjt:  NRKRVITV-LWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKR-------------SECSKKASAATNFNRSHSVSDSMEESHRAEAVRDCIHFFNS

Query:  S
        S
Subjt:  S

AT5G01225.1 unknown protein2.3e-0434.69Show/hide
Query:  QRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSL-----KKRSECSKKASAATNFNRSHSVSDSMEESHRAEAVRDCIHFFNSSSSSS
        +  R+RV+  ++ F    S   + +  LR +G +V K  R +S      K     S   S++    +S S++ S  ESHRAEA+ DCI F NS SS S
Subjt:  QRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSL-----KKRSECSKKASAATNFNRSHSVSDSMEESHRAEAVRDCIHFFNSSSSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAAAATAAGGTCAAGCAGAGGAGTGAGTTTGAGGTCAGATGAAGGCACCGCCAAGCCAACAGCTCTCCAAAGAAACAGGAAAAGGGTGATCACAGTGTTATGGGT
TTTCCGGCTGCCAAAATCCGGCAGATTCTCGCCGGAAAGTTTCCTCCGCCGCGTAGGCGCCAAAGTGGCCAAAGTTCTACGCGCTGTGTCATTGAAAAAGAGGTCAGAGT
GTTCAAAAAAGGCCTCCGCCGCTACTAACTTCAACAGATCCCATTCGGTGTCGGATTCCATGGAAGAATCTCACAGAGCTGAAGCTGTCAGAGATTGCATCCACTTCTTC
AATTCCTCTTCTTCTTCTTCAGCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAAAATAAGGTCAAGCAGAGGAGTGAGTTTGAGGTCAGATGAAGGCACCGCCAAGCCAACAGCTCTCCAAAGAAACAGGAAAAGGGTGATCACAGTGTTATGGGT
TTTCCGGCTGCCAAAATCCGGCAGATTCTCGCCGGAAAGTTTCCTCCGCCGCGTAGGCGCCAAAGTGGCCAAAGTTCTACGCGCTGTGTCATTGAAAAAGAGGTCAGAGT
GTTCAAAAAAGGCCTCCGCCGCTACTAACTTCAACAGATCCCATTCGGTGTCGGATTCCATGGAAGAATCTCACAGAGCTGAAGCTGTCAGAGATTGCATCCACTTCTTC
AATTCCTCTTCTTCTTCTTCAGCTCTTTGA
Protein sequenceShow/hide protein sequence
MSKIRSSRGVSLRSDEGTAKPTALQRNRKRVITVLWVFRLPKSGRFSPESFLRRVGAKVAKVLRAVSLKKRSECSKKASAATNFNRSHSVSDSMEESHRAEAVRDCIHFF
NSSSSSSAL