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Carg13292 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13292
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr07:6139237..6140094
RNA-Seq ExpressionCarg13292
SyntenyCarg13292
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027412.1 hypothetical protein SDJN02_11424, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-65100Show/hide
Query:  MAVFFFLNFWIDTLNLMAIHPPEGTPTVFLSTGSMRLNDLGVVVTDSASNDEEIKSMEMNRVVFWDDDPGCGWHYECDIVNAGHCPASIPSFAGGTRVDP
        MAVFFFLNFWIDTLNLMAIHPPEGTPTVFLSTGSMRLNDLGVVVTDSASNDEEIKSMEMNRVVFWDDDPGCGWHYECDIVNAGHCPASIPSFAGGTRVDP
Subjt:  MAVFFFLNFWIDTLNLMAIHPPEGTPTVFLSTGSMRLNDLGVVVTDSASNDEEIKSMEMNRVVFWDDDPGCGWHYECDIVNAGHCPASIPSFAGGTRVDP

Query:  KANCEEKVMINGQWNSCR
        KANCEEKVMINGQWNSCR
Subjt:  KANCEEKVMINGQWNSCR
PON63693.1 hypothetical protein TorRG33x02_275550, partial [Trema orientale]6.3e-0427.74Show/hide
Query:  GVVVTDSASNDEEIKSMEMNRVVFWDDDP-----------------------------------------------------------GCGWHYECDIVN
        G++V +S ++ EEI+ M+MNRVV   D P                                                           G   H E D+V+
Subjt:  GVVVTDSASNDEEIKSMEMNRVVFWDDDP-----------------------------------------------------------GCGWHYECDIVN

Query:  AGHCPASIPSFAGGTRVDPKANCEEKVMINGQWNSCR
        AGH PASI      T V P+A+CEEK ++N +W+ CR
Subjt:  AGHCPASIPSFAGGTRVDPKANCEEKVMINGQWNSCR
TrEMBL top hitse value%identityAlignment
A0A2P5CRN2 Uncharacterized protein (Fragment)3.1e-0427.74Show/hide
Query:  GVVVTDSASNDEEIKSMEMNRVVFWDDDP-----------------------------------------------------------GCGWHYECDIVN
        G++V +S ++ EEI+ M+MNRVV   D P                                                           G   H E D+V+
Subjt:  GVVVTDSASNDEEIKSMEMNRVVFWDDDP-----------------------------------------------------------GCGWHYECDIVN

Query:  AGHCPASIPSFAGGTRVDPKANCEEKVMINGQWNSCR
        AGH PASI      T V P+A+CEEK ++N +W+ CR
Subjt:  AGHCPASIPSFAGGTRVDPKANCEEKVMINGQWNSCR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTGTTCTTCTTCCTCAACTTTTGGATTGACACTCTGAATCTGATGGCTATCCATCCACCGGAAGGCACTCCGACGGTGTTTCTCTCAACAGGATCGATGAGATT
GAATGATTTGGGGGTCGTAGTTACCGATTCCGCTTCCAACGACGAAGAAATTAAATCCATGGAGATGAACAGGGTGGTTTTCTGGGACGATGATCCCGGCTGTGGTTGGC
ATTACGAATGTGACATTGTTAATGCTGGCCACTGCCCGGCTTCCATTCCCAGCTTTGCAGGTGGGACAAGGGTTGATCCCAAGGCCAACTGTGAAGAGAAGGTTATGATC
AATGGTCAATGGAACTCTTGCAGG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTGTTCTTCTTCCTCAACTTTTGGATTGACACTCTGAATCTGATGGCTATCCATCCACCGGAAGGCACTCCGACGGTGTTTCTCTCAACAGGATCGATGAGATT
GAATGATTTGGGGGTCGTAGTTACCGATTCCGCTTCCAACGACGAAGAAATTAAATCCATGGAGATGAACAGGGTGGTTTTCTGGGACGATGATCCCGGCTGTGGTTGGC
ATTACGAATGTGACATTGTTAATGCTGGCCACTGCCCGGCTTCCATTCCCAGCTTTGCAGGTGGGACAAGGGTTGATCCCAAGGCCAACTGTGAAGAGAAGGTTATGATC
AATGGTCAATGGAACTCTTGCAGG
Protein sequenceShow/hide protein sequence
MAVFFFLNFWIDTLNLMAIHPPEGTPTVFLSTGSMRLNDLGVVVTDSASNDEEIKSMEMNRVVFWDDDPGCGWHYECDIVNAGHCPASIPSFAGGTRVDPKANCEEKVMI
NGQWNSCR