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Carg13312 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13312
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description10 kDa chaperonin, mitochondrial-like
Genome locationCarg_Chr07:6359103..6361947
RNA-Seq ExpressionCarg13312
SyntenyCarg13312
Gene Ontology termsGO:0051085 - chaperone cofactor-dependent protein refolding (biological process)
GO:0005759 - mitochondrial matrix (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
GO:0051087 - chaperone binding (molecular function)
InterPro domainsIPR011032 - GroES-like superfamily
IPR018369 - Chaperonin GroES, conserved site
IPR020818 - GroES chaperonin family
IPR037124 - GroES chaperonin superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455733.1 PREDICTED: 10 kDa chaperonin-like [Cucumis melo]2.2e-3987.63Show/hide
Query:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE
        MAKRL+PLLNRVLIEKIVPP KTNSGILLPEKSSKLNSGKVI+VGPG RDR+G IIP+ VKEG+ VLLPEYGG EVKLGEKQFYL+RDEDLLGTLHE
Subjt:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE

XP_022154455.1 10 kDa chaperonin, mitochondrial-like [Momordica charantia]1.4e-4190.72Show/hide
Query:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE
        MAKRLVPLLNRVLIEKIVPPAKTN+GILLPEKSSKLNSGKV+SVGPGTRDR+GN+IPV VKEG+TVLLPEYGGTEVKLG+KQ YL+RDEDLLGTLHE
Subjt:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE

XP_022931931.1 10 kDa chaperonin, mitochondrial-like [Cucurbita moschata]3.6e-45100Show/hide
Query:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE
        MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE
Subjt:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE

XP_022966634.1 10 kDa chaperonin, mitochondrial-like [Cucurbita maxima]1.4e-4497.94Show/hide
Query:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE
        MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPV+VKEGETVLLPEYGGTEVKLGEKQFYL+RDEDLLGTLHE
Subjt:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE

XP_038881343.1 10 kDa chaperonin, mitochondrial-like [Benincasa hispida]4.8e-4292.78Show/hide
Query:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE
        MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVIS+GPG RDR+G IIPV VKEG+TVLLPEYGGTEVKLGEKQFYL+RDEDLLGTLHE
Subjt:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE

TrEMBL top hitse value%identityAlignment
A0A0A0KYT6 Uncharacterized protein5.4e-3985.57Show/hide
Query:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE
        MAKRL+PLLNRVLIEKIVPP KTNSGILLPEKS+KLNSGKVI+VGPG RDR+G IIP+ VKEG+ VLLPEYGG EVKLGEKQFYL+RDEDLLGTLH+
Subjt:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE

A0A1S3C2U3 10 kDa chaperonin-like1.1e-3987.63Show/hide
Query:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE
        MAKRL+PLLNRVLIEKIVPP KTNSGILLPEKSSKLNSGKVI+VGPG RDR+G IIP+ VKEG+ VLLPEYGG EVKLGEKQFYL+RDEDLLGTLHE
Subjt:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE

A0A6J1DJN1 10 kDa chaperonin, mitochondrial-like6.8e-4290.72Show/hide
Query:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE
        MAKRLVPLLNRVLIEKIVPPAKTN+GILLPEKSSKLNSGKV+SVGPGTRDR+GN+IPV VKEG+TVLLPEYGGTEVKLG+KQ YL+RDEDLLGTLHE
Subjt:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE

A0A6J1EUZ7 10 kDa chaperonin, mitochondrial-like1.7e-45100Show/hide
Query:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE
        MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE
Subjt:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE

A0A6J1HUD0 10 kDa chaperonin, mitochondrial-like6.6e-4597.94Show/hide
Query:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE
        MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPV+VKEGETVLLPEYGGTEVKLGEKQFYL+RDEDLLGTLHE
Subjt:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE

SwissProt top hitse value%identityAlignment
O59804 10 kDa heat shock protein, mitochondrial4.6e-1949.48Show/hide
Query:  AKRLVPLLNRVLIEKIVPPAKTNSGILLPEKS-SKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE
        AK +VPLL+R+L+++I    KT SGI LPEKS  KL+ G+VISVG G  +++G +    V  G+ VLLP YGG+ +K+GE+++ LYRD +LL  + E
Subjt:  AKRLVPLLNRVLIEKIVPPAKTNSGILLPEKS-SKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE

P34893 10 kDa chaperonin, mitochondrial2.2e-3773.2Show/hide
Query:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE
        M KRL+P  NR+L+++++ PAKT SGILLPEKSSKLNSGKVI+VGPG+RD+DG +IPV VKEG+TVLLPEYGGT+VKLGE +++L+RDED+LGTLHE
Subjt:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE

P61603 10 kDa heat shock protein, mitochondrial4.3e-1747.83Show/hide
Query:  KRLVPLLNRVLIEKIVPPAKTNSGILLPEKS-SKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLG
        ++ +PL +RVL+E+      T  GI+LPEKS  K+    V++VG G++ + G I PV VK G+ VLLPEYGGT+V L +K ++L+RD D+LG
Subjt:  KRLVPLLNRVLIEKIVPPAKTNSGILLPEKS-SKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLG

Q96539 10 kDa chaperonin3.7e-3773.2Show/hide
Query:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE
        M KRL+P  NR+L++ ++ PAKT SGILLPEK+SKLNSGKVI+VGPG+RD+DG +IPV VKEG+TVLLPEYGGT+VKLGEK+++L+RDED+LGTLHE
Subjt:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE

Q9W6X3 10 kDa heat shock protein, mitochondrial6.6e-1846.74Show/hide
Query:  KRLVPLLNRVLIEKIVPPAKTNSGILLPEKS-SKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLG
        ++ +PL +RVL+E+++    T  GI+LPEKS  K+    V++VGPG+ ++ G + P+ VK GE VLLP+YGGT+V L +K ++L+RD D+LG
Subjt:  KRLVPLLNRVLIEKIVPPAKTNSGILLPEKS-SKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLG

Arabidopsis top hitse value%identityAlignment
AT1G14980.1 chaperonin 101.5e-3873.2Show/hide
Query:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE
        M KRL+P  NR+L+++++ PAKT SGILLPEKSSKLNSGKVI+VGPG+RD+DG +IPV VKEG+TVLLPEYGGT+VKLGE +++L+RDED+LGTLHE
Subjt:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE

AT1G23100.1 GroES-like family protein6.9e-3977.32Show/hide
Query:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE
        MAKRL+P LNRVL+EKI+PP+KT SGILLPEKSS+LNSG+VI+VGPG RDR GN+IPV VKEG+ VLLPE+GGT+VKLGEK+F LYRDED++ TLHE
Subjt:  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE

AT5G20720.1 chaperonin 201.7e-0838.95Show/hide
Query:  KRLVPLLNRVLIEKIVPPAKTNSGILLPEKS-SKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYL-YRDEDLLGTL
        K L PL +RV I+      KT  G+LL E +  K + G VI+VGPG+ D +G I P+ V  G TVL  +Y G + K  +   Y+  R  D++  L
Subjt:  KRLVPLLNRVLIEKIVPPAKTNSGILLPEKS-SKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYL-YRDEDLLGTL

AT5G20720.2 chaperonin 201.7e-0838.95Show/hide
Query:  KRLVPLLNRVLIEKIVPPAKTNSGILLPEKS-SKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYL-YRDEDLLGTL
        K L PL +RV I+      KT  G+LL E +  K + G VI+VGPG+ D +G I P+ V  G TVL  +Y G + K  +   Y+  R  D++  L
Subjt:  KRLVPLLNRVLIEKIVPPAKTNSGILLPEKS-SKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYL-YRDEDLLGTL

AT5G20720.3 chaperonin 201.7e-0838.95Show/hide
Query:  KRLVPLLNRVLIEKIVPPAKTNSGILLPEKS-SKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYL-YRDEDLLGTL
        K L PL +RV I+      KT  G+LL E +  K + G VI+VGPG+ D +G I P+ V  G TVL  +Y G + K  +   Y+  R  D++  L
Subjt:  KRLVPLLNRVLIEKIVPPAKTNSGILLPEKS-SKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYL-YRDEDLLGTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGCGATTAGTTCCATTGCTCAATCGCGTTCTGATCGAGAAGATTGTTCCCCCTGCCAAAACCAATTCCGGCATTTTGCTTCCTGAGAAGTCCAGCAAGCTCAA
CTCTGGAAAAGTTATCTCTGTTGGTCCTGGGACTCGTGACAGAGATGGAAACATTATCCCTGTTGTTGTAAAGGAAGGTGAAACCGTCCTTCTACCAGAATATGGAGGAA
CTGAAGTCAAGCTTGGAGAAAAGCAGTTCTATCTATACCGTGATGAAGATCTGCTAGGAACACTTCACGAATGA
mRNA sequenceShow/hide mRNA sequence
AATTTGCAGAATCCTCGTCCACGTTGGTCTTAGGGTTTAGGCTGAGTTTCAGTTTCTCCGATTGCCTCAGATGGCGAAGCGATTAGTTCCATTGCTCAATCGCGTTCTGA
TCGAGAAGATTGTTCCCCCTGCCAAAACCAATTCCGGCATTTTGCTTCCTGAGAAGTCCAGCAAGCTCAACTCTGGAAAAGTTATCTCTGTTGGTCCTGGGACTCGTGAC
AGAGATGGAAACATTATCCCTGTTGTTGTAAAGGAAGGTGAAACCGTCCTTCTACCAGAATATGGAGGAACTGAAGTCAAGCTTGGAGAAAAGCAGTTCTATCTATACCG
TGATGAAGATCTGCTAGGAACACTTCACGAATGATTGATCATGTGAAAGTTGGATTGTTTTTCTAAGTCTTTAGTAGCTACATGTTCTGGGTATAGAGAGCTAGTTTATG
TTGTCTGTATTCAAGTGAGACTTCAAACCGACATCCATTTCGTGTTATTGGACAAAATCATGAACTTTTTACTGGAGCCAGATGGGTATTTTTGGCGTGTCCTAATAAAT
TGTGATTATTAGGCT
Protein sequenceShow/hide protein sequence
MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGTRDRDGNIIPVVVKEGETVLLPEYGGTEVKLGEKQFYLYRDEDLLGTLHE