; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg13314 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13314
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionR3H domain-containing protein 1-like isoform X1
Genome locationCarg_Chr07:6386456..6389038
RNA-Seq ExpressionCarg13314
SyntenyCarg13314
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR001374 - R3H domain
IPR024771 - SUZ domain
IPR036867 - R3H domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595430.1 R3H domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]7.8e-18392.37Show/hide
Query:  MDSIDGLPDSLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYG
        MDSIDGLPDSLKEKLSMVDPFL+EALQNPRHRLT                        +LRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYG
Subjt:  MDSIDGLPDSLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYG

Query:  LQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSN
        LQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSN
Subjt:  LQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSN

Query:  AFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSIPPSFTGYHVPRNEVSL
        AFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNF PFTVQSIPPSFTGYHVPRNEVSL
Subjt:  AFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSIPPSFTGYHVPRNEVSL

Query:  GYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTTFRAPLYQQALRSEYVQYH
        GYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTTFRAPLYQQALRSEYVQYH
Subjt:  GYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTTFRAPLYQQALRSEYVQYH

KAG7027433.1 R3H domain-containing protein 1 [Cucurbita argyrosperma subsp. argyrosperma]3.4e-202100Show/hide
Query:  MDSIDGLPDSLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYG
        MDSIDGLPDSLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYG
Subjt:  MDSIDGLPDSLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYG

Query:  LQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSN
        LQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSN
Subjt:  LQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSN

Query:  AFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSIPPSFTGYHVPRNEVSL
        AFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSIPPSFTGYHVPRNEVSL
Subjt:  AFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSIPPSFTGYHVPRNEVSL

Query:  GYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTTFRAPLYQQALRSEYVQYH
        GYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTTFRAPLYQQALRSEYVQYH
Subjt:  GYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTTFRAPLYQQALRSEYVQYH

XP_022931939.1 R3H domain-containing protein 1-like isoform X1 [Cucurbita moschata]2.8e-18091.53Show/hide
Query:  MDSIDGLPDSLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYG
        MDSIDGLPDSLKEKLSMVDPFLVEALQNPRHRLT                        +LRMELDIQRFLENQE QVFEFQHFPTSYLRLAAHRVAQHYG
Subjt:  MDSIDGLPDSLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYG

Query:  LQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSN
        LQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCL RTVEQRMEEYDKARARIFSRHGSTVLSN
Subjt:  LQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSN

Query:  AFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSIPPSFTGYHVPRNEVSL
        AFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGS ATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNF PFTVQSIPPSFTGYHVPRNEVSL
Subjt:  AFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSIPPSFTGYHVPRNEVSL

Query:  GYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTTFRAPLYQQALRSEYVQYH
        GYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTT+RAPLYQQALRSEYVQYH
Subjt:  GYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTTFRAPLYQQALRSEYVQYH

XP_022966122.1 uncharacterized protein LOC111465900 isoform X1 [Cucurbita maxima]4.9e-17790.11Show/hide
Query:  MDSIDGLPDSLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYG
        MDSIDGLPDSLKEKLSMVDPFLVEALQNPRHRLT                        +LRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYG
Subjt:  MDSIDGLPDSLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYG

Query:  LQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSN
        LQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPA+QSVDDE GCVKIAIRPRLNK SDDAGNGMARQCL RTVEQRMEEYDKARARIFSRHGSTVL N
Subjt:  LQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSN

Query:  AFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSIPPSFTGYHVPRNEVSL
        AFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNF PFTVQSIPPSFTGYHVP NEV L
Subjt:  AFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSIPPSFTGYHVPRNEVSL

Query:  GYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTTFRAPLYQQALRSEYVQYH
        GYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAH TFRAPLYQQALRS+YVQYH
Subjt:  GYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTTFRAPLYQQALRSEYVQYH

XP_023518666.1 R3H domain-containing protein 1-like [Cucurbita pepo subsp. pepo]1.3e-18091.24Show/hide
Query:  MDSIDGLPDSLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYG
        MDSIDGLPDS KEKLSMVDPFLVEAL NPRHRLT                        +LRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYG
Subjt:  MDSIDGLPDSLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYG

Query:  LQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSN
        LQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCL RTVEQRMEEYDKARARIFSRHGSTVLSN
Subjt:  LQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSN

Query:  AFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSIPPSFTGYHVPRNEVSL
        AFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNF PFTVQSIPPSFTGYHVPRNEVSL
Subjt:  AFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSIPPSFTGYHVPRNEVSL

Query:  GYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTTFRAPLYQQALRSEYVQYH
        GY+SPSPIKTAGLNQISRTMANVPWPYAGMLHAHTTFRAPLYQQALRS+YVQYH
Subjt:  GYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTTFRAPLYQQALRSEYVQYH

TrEMBL top hitse value%identityAlignment
A0A0A0L247 Uncharacterized protein1.0e-13270.79Show/hide
Query:  SIDGLPDSLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQ
        SID LPD LK+K+S VDPFL+EAL NPRHRLT                        +LRMELDIQRFL+NQ+QQ+FEFQHFPTSYLRLAAHRVAQHYGLQ
Subjt:  SIDGLPDSLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQ

Query:  TMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCLRRTVEQRMEEYDKARARIFSRHGS----TVL
        TMVQDNGIDGQGRILV+ T EARFP ICLSQIPAKQ  DD+ G VKIAIRPR NK SD+AGN MA+Q   RTVEQR EEYDKARARIFS  GS     VL
Subjt:  TMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCLRRTVEQRMEEYDKARARIFSRHGS----TVL

Query:  SNAFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSIPPSFTGYHVPRNEV
         +   E   I  N D  E CRVN+VEKYTS+ DAG+GA+SRVAILRDREKDLSDPDYDRSY RY++SLPIN TP +NF PFTVQ+I PSFTGYHVPRNEV
Subjt:  SNAFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSIPPSFTGYHVPRNEV

Query:  SLGYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTTFRAPLYQQALRSEYVQYH
        SLGYVSPSPIKT GLNQ+SR  ANVPWP AGM + HT F+APLYQQ+L  +Y+QY+
Subjt:  SLGYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTTFRAPLYQQALRSEYVQYH

A0A6J1EVM7 R3H domain-containing protein 1-like isoform X11.3e-18091.53Show/hide
Query:  MDSIDGLPDSLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYG
        MDSIDGLPDSLKEKLSMVDPFLVEALQNPRHRLT                        +LRMELDIQRFLENQE QVFEFQHFPTSYLRLAAHRVAQHYG
Subjt:  MDSIDGLPDSLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYG

Query:  LQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSN
        LQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCL RTVEQRMEEYDKARARIFSRHGSTVLSN
Subjt:  LQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSN

Query:  AFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSIPPSFTGYHVPRNEVSL
        AFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGS ATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNF PFTVQSIPPSFTGYHVPRNEVSL
Subjt:  AFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSIPPSFTGYHVPRNEVSL

Query:  GYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTTFRAPLYQQALRSEYVQYH
        GYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTT+RAPLYQQALRSEYVQYH
Subjt:  GYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTTFRAPLYQQALRSEYVQYH

A0A6J1F0U2 R3H domain-containing protein 1-like isoform X24.4e-16398.29Show/hide
Query:  MELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDD
        MELDIQRFLENQE QVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDD
Subjt:  MELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDD

Query:  AGNGMARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSNAFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGR
        AGNGMARQCL RTVEQRMEEYDKARARIFSRHGSTVLSNAFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGS ATSRVAILRDREKDLSDPDYDRSYGR
Subjt:  AGNGMARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSNAFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGR

Query:  YIRSLPINPTPIMNFTPFTVQSIPPSFTGYHVPRNEVSLGYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTTFRAPLYQQALRSEYVQYH
        YIRSLPINPTPIMNF PFTVQSIPPSFTGYHVPRNEVSLGYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTT+RAPLYQQALRSEYVQYH
Subjt:  YIRSLPINPTPIMNFTPFTVQSIPPSFTGYHVPRNEVSLGYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTTFRAPLYQQALRSEYVQYH

A0A6J1HM58 uncharacterized protein LOC111465900 isoform X12.4e-17790.11Show/hide
Query:  MDSIDGLPDSLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYG
        MDSIDGLPDSLKEKLSMVDPFLVEALQNPRHRLT                        +LRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYG
Subjt:  MDSIDGLPDSLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYG

Query:  LQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSN
        LQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPA+QSVDDE GCVKIAIRPRLNK SDDAGNGMARQCL RTVEQRMEEYDKARARIFSRHGSTVL N
Subjt:  LQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSN

Query:  AFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSIPPSFTGYHVPRNEVSL
        AFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNF PFTVQSIPPSFTGYHVP NEV L
Subjt:  AFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSIPPSFTGYHVPRNEVSL

Query:  GYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTTFRAPLYQQALRSEYVQYH
        GYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAH TFRAPLYQQALRS+YVQYH
Subjt:  GYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTTFRAPLYQQALRSEYVQYH

A0A6J1HR03 uncharacterized protein LOC111465900 isoform X27.7e-16096.59Show/hide
Query:  MELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDD
        MELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPA+QSVDDE GCVKIAIRPRLNK SDD
Subjt:  MELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDD

Query:  AGNGMARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSNAFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGR
        AGNGMARQCL RTVEQRMEEYDKARARIFSRHGSTVL NAFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGR
Subjt:  AGNGMARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSNAFPEEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGR

Query:  YIRSLPINPTPIMNFTPFTVQSIPPSFTGYHVPRNEVSLGYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTTFRAPLYQQALRSEYVQYH
        YIRSLPINPTPIMNF PFTVQSIPPSFTGYHVP NEV LGYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAH TFRAPLYQQALRS+YVQYH
Subjt:  YIRSLPINPTPIMNFTPFTVQSIPPSFTGYHVPRNEVSLGYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHTTFRAPLYQQALRSEYVQYH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G40960.1 Single-stranded nucleic acid binding R3H protein1.3e-5541.29Show/hide
Query:  VDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG-QGRI
        VDPFLVEALQNPRHRLT                        +LRMELD+QRFL++ +QQ FEFQHFPTSYLR AAHRVA HYGL T V+D G DG + RI
Subjt:  VDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG-QGRI

Query:  LVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCLRRTVEQRMEEYDKARARIFSR----HGSTVLSNAFPEEKDILANG
        +V  + ++RFP   LS+IP KQS   +   +K+ I+PR  K S   G+ + +  L ++VE+R E+YD+ARARIF+       +   S   P   +  ++ 
Subjt:  LVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCLRRTVEQRMEEYDKARARIFSR----HGSTVLSNAFPEEKDILANG

Query:  DGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSI-----PPSFTGYH-VPRNEVSLGYVS-P
        D  +  +   +E   +     S   SR+AILRDREKD  DPDYDRS  RYI +LP++    +    F +Q++        F GY       ++LG  S  
Subjt:  DGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSI-----PPSFTGYH-VPRNEVSLGYVS-P

Query:  SPIKTAGLNQISRTMA-NVPWP-YAGMLHAH-------TTFRAPLYQQALRSEYVQ
        SP  T GLNQ SR  A  + WP  A +++ H       + F+A  Y Q L  +Y+Q
Subjt:  SPIKTAGLNQISRTMA-NVPWP-YAGMLHAH-------TTFRAPLYQQALRSEYVQ

AT3G10770.1 Single-stranded nucleic acid binding R3H protein2.4e-5744.71Show/hide
Query:  SLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNG
        S+ EK +MVDPFLVEALQNPRHRLT                        +LRMELDIQ+F +N EQ  FEF  FPTSYLRLAAHRVAQHYGL TM  DNG
Subjt:  SLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNG

Query:  I---DG-QGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGM-ARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSNAFPE
            DG   RILV  T E+RFP +CLS+IP KQ  +      KIAI+PR  + S   G+G   +Q L R+VE+R EEYDKARARIF+   S+   ++   
Subjt:  I---DG-QGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGM-ARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSNAFPE

Query:  EKDILANGDGGEGCRVNEVEKYTSIKDA---GSGATSRVAILRDREKDLSDPDYDRSYGRYI-----RSLPINPTPIMNFTPFTVQSIPPSFTGY--HVP
            L   +        EV    S  DA    SG TSRVAI+RDREKD  DPDYDRSY RY+     R + + P+   +F+P  +    P   G+  H+P
Subjt:  EKDILANGDGGEGCRVNEVEKYTSIKDA---GSGATSRVAILRDREKDLSDPDYDRSYGRYI-----RSLPINPTPIMNFTPFTVQSIPPSFTGY--HVP

Query:  R-NEVSLGYVSPSPIKTAGLNQISRTMAN-VPWPYAGMLH
        R ++ +L Y  P       L+  +  +A+  PWP + +++
Subjt:  R-NEVSLGYVSPSPIKTAGLNQISRTMAN-VPWPYAGMLH

AT3G10770.2 Single-stranded nucleic acid binding R3H protein4.4e-5945.37Show/hide
Query:  SLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNG
        S+ EK +MVDPFLVEALQNPRHRLT                        +LRMELDIQ+F +N EQ  FEF  FPTSYLRLAAHRVAQHYGL TM  DNG
Subjt:  SLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNG

Query:  I---DG-QGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGM-ARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSNAFPE
            DG   RILV  T E+RFP +CLS+IP KQ  +      KIAI+PR  + S   G+G   +Q L R+VE+R EEYDKARARIF+   S+   ++   
Subjt:  I---DG-QGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGM-ARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSNAFPE

Query:  EKDILANGDGGEGCRVNEVEKYTSIKDA---GSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSIPPSFTGY--HVPR-NEV
            L   +        EV    S  DA    SG TSRVAI+RDREKD  DPDYDRSY RY+R +P       +F+P  +    P   G+  H+PR ++ 
Subjt:  EKDILANGDGGEGCRVNEVEKYTSIKDA---GSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSIPPSFTGY--HVPR-NEV

Query:  SLGYVSPSPIKTAGLNQISRTMAN-VPWPYAGMLH
        +L Y  P       L+  +  +A+  PWP + +++
Subjt:  SLGYVSPSPIKTAGLNQISRTMAN-VPWPYAGMLH

AT3G56680.1 Single-stranded nucleic acid binding R3H protein4.7e-6143.66Show/hide
Query:  VDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG-QGRI
        VDPFLVEAL N RHRLT                        +LRMELD+QR L+N EQQ FEFQHFPTSYLRLAAHRVA HYGL T VQ++G DG + RI
Subjt:  VDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGIDG-QGRI

Query:  LVRNTGEARFPPICLSQIP-AKQSVDDELGCVKIAIRPRLNKSSD-DAGNGMARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSNAFPE----EKDILA
        LV  T E++FP + LS+IP AKQS + +    K++I+ R +K S   AG+    +   R+VE+R EEYDKAR RIFS        ++  E    E++   
Subjt:  LVRNTGEARFPPICLSQIP-AKQSVDDELGCVKIAIRPRLNKSSD-DAGNGMARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSNAFPE----EKDILA

Query:  NGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSIPP-----SFTGYH-VPRNEVSLGYVS
        + D  +  +   VE   ++    SG TSRVAI RDREKD  DPDYDR + RYIRSLP+N     N  PF +Q IP       FTGY+ +P     LG+  
Subjt:  NGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSIPP-----SFTGYH-VPRNEVSLGYVS

Query:  PSPIKTAGLNQISRTMANVPWPYAGMLHAHT-------TFRAPLYQQALRSEYVQ
        P P         +     + WP A M++AH        + +A   QQ L  +Y+Q
Subjt:  PSPIKTAGLNQISRTMANVPWPYAGMLHAHT-------TFRAPLYQQALRSEYVQ

AT5G05100.1 Single-stranded nucleic acid binding R3H protein8.7e-5541.31Show/hide
Query:  SLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYGL-QTMVQDN
        ++ +K +MVDPFLVEALQNPRHRLT                        +LRMELDIQ+F ++ EQQ +EFQ  PTSYLRL AHRVAQHYGL  T ++  
Subjt:  SLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYGL-QTMVQDN

Query:  GIDGQG-RILVRNTGEARFPPICLSQIPAKQ-SVDDELGCVKIAIRPRLNKSSDDAGNGM-ARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSNA----
        G+DG G RIL   T E+R+P +CLS+IP KQ  +       KIAI+PR N+ +  +G+G    + L R+VE+R EEYDKARARIF+   S+   ++    
Subjt:  GIDGQG-RILVRNTGEARFPPICLSQIPAKQ-SVDDELGCVKIAIRPRLNKSSDDAGNGM-ARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSNA----

Query:  ----FP-------------EEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSI
            +P              E +++ N +        +VE+   I+D  SG TSRVAI+RDREKD  DPDYDR+  RY+R  P    P+ NF P  +   
Subjt:  ----FP-------------EEKDILANGDGGEGCRVNEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSI

Query:  PPSFTGYHVPRNEVSLGYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHT
                +PR + SL Y  P       LN      +   WP A M +A T
Subjt:  PPSFTGYHVPRNEVSLGYVSPSPIKTAGLNQISRTMANVPWPYAGMLHAHT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCCATTGATGGCCTTCCAGATTCCCTCAAAGAGAAACTCTCCATGGTTGACCCCTTTTTGGTCGAGGCACTTCAGAACCCTCGACACCGTCTAACCAGTTTAAT
CTGTTATTGGTCTTCTTCTGAACAAAGGATTTTCTCTGCTCATTGTAGTTTAATTGTCACCATAGTTCTGCGAATGGAACTCGATATCCAGAGGTTTTTGGAAAATCAAG
AACAGCAAGTGTTTGAGTTCCAACACTTCCCTACGTCGTATCTTCGACTTGCAGCTCATCGTGTTGCTCAACATTACGGCCTGCAAACTATGGTTCAGGATAATGGCATT
GATGGACAAGGGAGAATTCTGGTGAGGAATACTGGTGAAGCTAGATTCCCGCCTATCTGCTTATCTCAAATACCTGCAAAACAGTCTGTTGATGATGAACTTGGGTGCGT
TAAGATTGCGATTAGACCGAGGTTGAATAAGTCATCTGATGATGCTGGCAATGGTATGGCTAGGCAATGTCTTCGTAGGACTGTGGAGCAGAGGATGGAAGAGTATGATA
AGGCTCGTGCTCGAATATTCAGTAGACATGGGAGTACTGTATTGTCTAATGCCTTCCCTGAGGAGAAAGATATATTGGCAAATGGAGATGGAGGAGAAGGGTGTAGAGTG
AATGAAGTTGAGAAGTATACGAGTATCAAAGATGCCGGGAGTGGGGCTACTTCTCGGGTTGCCATTTTAAGAGATAGGGAAAAGGATCTTAGTGACCCGGATTATGATCG
GAGCTATGGAAGGTATATTAGGAGCCTTCCGATTAATCCGACTCCGATCATGAATTTTACTCCTTTTACCGTGCAAAGCATCCCGCCTTCATTTACTGGTTACCATGTAC
CTCGGAACGAGGTTTCGTTGGGCTATGTTTCTCCTTCACCTATCAAGACTGCAGGATTGAATCAGATATCTAGAACCATGGCCAATGTGCCTTGGCCATATGCAGGGATG
CTGCACGCTCATACTACTTTCCGGGCTCCATTGTACCAACAGGCTTTGAGGTCAGAGTATGTGCAATACCATTGA
mRNA sequenceShow/hide mRNA sequence
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCTTCAAGCCTCTGATTACGGTAGTGAGAGAAAGTCTTCAGAGAGAGAAAACGATGGATTCCATTGAT
GGCCTTCCAGATTCCCTCAAAGAGAAACTCTCCATGGTTGACCCCTTTTTGGTCGAGGCACTTCAGAACCCTCGACACCGTCTAACCAGTTTAATCTGTTATTGGTCTTC
TTCTGAACAAAGGATTTTCTCTGCTCATTGTAGTTTAATTGTCACCATAGTTCTGCGAATGGAACTCGATATCCAGAGGTTTTTGGAAAATCAAGAACAGCAAGTGTTTG
AGTTCCAACACTTCCCTACGTCGTATCTTCGACTTGCAGCTCATCGTGTTGCTCAACATTACGGCCTGCAAACTATGGTTCAGGATAATGGCATTGATGGACAAGGGAGA
ATTCTGGTGAGGAATACTGGTGAAGCTAGATTCCCGCCTATCTGCTTATCTCAAATACCTGCAAAACAGTCTGTTGATGATGAACTTGGGTGCGTTAAGATTGCGATTAG
ACCGAGGTTGAATAAGTCATCTGATGATGCTGGCAATGGTATGGCTAGGCAATGTCTTCGTAGGACTGTGGAGCAGAGGATGGAAGAGTATGATAAGGCTCGTGCTCGAA
TATTCAGTAGACATGGGAGTACTGTATTGTCTAATGCCTTCCCTGAGGAGAAAGATATATTGGCAAATGGAGATGGAGGAGAAGGGTGTAGAGTGAATGAAGTTGAGAAG
TATACGAGTATCAAAGATGCCGGGAGTGGGGCTACTTCTCGGGTTGCCATTTTAAGAGATAGGGAAAAGGATCTTAGTGACCCGGATTATGATCGGAGCTATGGAAGGTA
TATTAGGAGCCTTCCGATTAATCCGACTCCGATCATGAATTTTACTCCTTTTACCGTGCAAAGCATCCCGCCTTCATTTACTGGTTACCATGTACCTCGGAACGAGGTTT
CGTTGGGCTATGTTTCTCCTTCACCTATCAAGACTGCAGGATTGAATCAGATATCTAGAACCATGGCCAATGTGCCTTGGCCATATGCAGGGATGCTGCACGCTCATACT
ACTTTCCGGGCTCCATTGTACCAACAGGCTTTGAGGTCAGAGTATGTGCAATACCATTGATTAAAACTGATTTTACTTTACTTAGGTAATCATATTATAATATATATACT
CACTATGTTGCTTCCGAACCTCCAATTATAATCAATTATTTTAATTTAAAACCTTTTATTTATACTTACTATTCTTTTTAATGTTCATTATTCACTGTCTTTCTTCATCA
ATGATT
Protein sequenceShow/hide protein sequence
MDSIDGLPDSLKEKLSMVDPFLVEALQNPRHRLTSLICYWSSSEQRIFSAHCSLIVTIVLRMELDIQRFLENQEQQVFEFQHFPTSYLRLAAHRVAQHYGLQTMVQDNGI
DGQGRILVRNTGEARFPPICLSQIPAKQSVDDELGCVKIAIRPRLNKSSDDAGNGMARQCLRRTVEQRMEEYDKARARIFSRHGSTVLSNAFPEEKDILANGDGGEGCRV
NEVEKYTSIKDAGSGATSRVAILRDREKDLSDPDYDRSYGRYIRSLPINPTPIMNFTPFTVQSIPPSFTGYHVPRNEVSLGYVSPSPIKTAGLNQISRTMANVPWPYAGM
LHAHTTFRAPLYQQALRSEYVQYH