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Carg13322 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13322
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCir_N domain-containing protein
Genome locationCarg_Chr07:6443670..6445443
RNA-Seq ExpressionCarg13322
SyntenyCarg13322
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH03145.1 hypothetical protein Prudu_013932 [Prunus dulcis]1.9e-0660.38Show/hide
Query:  VLRSTESLMATAIRVREVELRVKNLQGNQNFLWRKPWTRSAAIAKRQTKEAVA
        + RST++L AT I+V+EV L  KNL GNQ+F  RKPWT SAAIA RQ ++A A
Subjt:  VLRSTESLMATAIRVREVELRVKNLQGNQNFLWRKPWTRSAAIAKRQTKEAVA

GEU72458.1 hypothetical protein [Tanacetum cinerariifolium]4.0e-0452.54Show/hide
Query:  LRSTESLMATAIRVREVELRVKNLQGNQNFLWRKPWTRSAAIAKRQTKEAVAMWSLSRV
        LRST SL+A  I V E+ LR KNL  NQ+F  R PW  S AIAK Q K+A+A ++ + V
Subjt:  LRSTESLMATAIRVREVELRVKNLQGNQNFLWRKPWTRSAAIAKRQTKEAVAMWSLSRV

KAG7027441.1 hypothetical protein SDJN02_11454, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-32100Show/hide
Query:  MEVLRSTESLMATAIRVREVELRVKNLQGNQNFLWRKPWTRSAAIAKRQTKEAVAMWSLSRVNCKSFLVGLSKNQ
        MEVLRSTESLMATAIRVREVELRVKNLQGNQNFLWRKPWTRSAAIAKRQTKEAVAMWSLSRVNCKSFLVGLSKNQ
Subjt:  MEVLRSTESLMATAIRVREVELRVKNLQGNQNFLWRKPWTRSAAIAKRQTKEAVAMWSLSRVNCKSFLVGLSKNQ

KVH99869.1 hypothetical protein Ccrd_021899 [Cynara cardunculus var. scolymus]9.3e-0964.81Show/hide
Query:  RSTESLMATAIRVREVELRVKNLQGNQNFLWRKPWTRSAAIAKRQTKEAVAMWS
        RST S  ATAI V EV LRVKNL GNQ+F WRKPW  SAAIA+ Q ++A+A +S
Subjt:  RSTESLMATAIRVREVELRVKNLQGNQNFLWRKPWTRSAAIAKRQTKEAVAMWS

TrEMBL top hitse value%identityAlignment
A0A103XZR8 Uncharacterized protein4.5e-0964.81Show/hide
Query:  RSTESLMATAIRVREVELRVKNLQGNQNFLWRKPWTRSAAIAKRQTKEAVAMWS
        RST S  ATAI V EV LRVKNL GNQ+F WRKPW  SAAIA+ Q ++A+A +S
Subjt:  RSTESLMATAIRVREVELRVKNLQGNQNFLWRKPWTRSAAIAKRQTKEAVAMWS

A0A4Y1RGF7 Uncharacterized protein9.4e-0760.38Show/hide
Query:  VLRSTESLMATAIRVREVELRVKNLQGNQNFLWRKPWTRSAAIAKRQTKEAVA
        + RST++L AT I+V+EV L  KNL GNQ+F  RKPWT SAAIA RQ ++A A
Subjt:  VLRSTESLMATAIRVREVELRVKNLQGNQNFLWRKPWTRSAAIAKRQTKEAVA

A0A6N2KQR3 Cir_N domain-containing protein (Fragment)4.6e-0658.93Show/hide
Query:  MEVLRSTESLMATAIRVREVELRVKNLQGNQNFLWRKPWTRSAAIAKRQTKEAVAM
        M   RST+SL ATAI V EV L  +NL GNQ+F WR P  RSAAIA  Q +EA A+
Subjt:  MEVLRSTESLMATAIRVREVELRVKNLQGNQNFLWRKPWTRSAAIAKRQTKEAVAM

A0A6N2KQU3 Cir_N domain-containing protein (Fragment)1.6e-0660.71Show/hide
Query:  MEVLRSTESLMATAIRVREVELRVKNLQGNQNFLWRKPWTRSAAIAKRQTKEAVAM
        M   RST+SL ATAI V EV L  +NL GNQ+F WR P  RSAAIA  Q +EA AM
Subjt:  MEVLRSTESLMATAIRVREVELRVKNLQGNQNFLWRKPWTRSAAIAKRQTKEAVAM

A0A6N2L6G3 Cir_N domain-containing protein (Fragment)4.6e-0658.93Show/hide
Query:  MEVLRSTESLMATAIRVREVELRVKNLQGNQNFLWRKPWTRSAAIAKRQTKEAVAM
        M   RST+SL ATAI V EV L  +NL GNQ+F WR P  RSAAIA  Q +EA A+
Subjt:  MEVLRSTESLMATAIRVREVELRVKNLQGNQNFLWRKPWTRSAAIAKRQTKEAVAM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTGTTGAGATCCACAGAGAGTTTGATGGCCACAGCTATCAGGGTTAGAGAAGTAGAGTTAAGAGTGAAGAACTTACAAGGGAACCAGAATTTTCTGTGGCGGAA
GCCGTGGACAAGATCGGCAGCCATTGCTAAGAGGCAGACCAAAGAGGCTGTGGCTATGTGGAGCCTTTCTCGTGTAAACTGTAAAAGTTTTCTTGTTGGGTTGAGCAAGA
ATCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTGTTGAGATCCACAGAGAGTTTGATGGCCACAGCTATCAGGGTTAGAGAAGTAGAGTTAAGAGTGAAGAACTTACAAGGGAACCAGAATTTTCTGTGGCGGAA
GCCGTGGACAAGATCGGCAGCCATTGCTAAGAGGCAGACCAAAGAGGCTGTGGCTATGTGGAGCCTTTCTCGTGTAAACTGTAAAAGTTTTCTTGTTGGGTTGAGCAAGA
ATCAATGA
Protein sequenceShow/hide protein sequence
MEVLRSTESLMATAIRVREVELRVKNLQGNQNFLWRKPWTRSAAIAKRQTKEAVAMWSLSRVNCKSFLVGLSKNQ